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MS023980 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023980
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:817775..818086
RNA-Seq ExpressionMS023980
SyntenyMS023980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFB69917.1 F-box domain, FBD domain, leucine-rich repeat domain, L domain-like protein [Tanacetum cinerariifolium]1.0e-0543.59Show/hide
Query:  EIAQSPSLVTHACNPIGGFNVVEGWAI---SLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETARGWFHRAVS
        E+  SPS V  AC+   G  V  GW +   SL  +S    WLAH K+ VGP  L EG      R+E  A GWFHRA +
Subjt:  EIAQSPSLVTHACNPIGGFNVVEGWAI---SLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETARGWFHRAVS

VFQ60704.1 unnamed protein product [Cuscuta campestris]5.5e-0444.44Show/hide
Query:  QSPSLVTHACNPIGGFNVVEGWAISLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETA
        +SPS VT AC+P GG+ VVE WA   G A E+  W AH K   GP  L E     + ++E  A
Subjt:  QSPSLVTHACNPIGGFNVVEGWAISLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETA

TrEMBL top hitse value%identityAlignment
A0A484KA44 Uncharacterized protein2.7e-0444.44Show/hide
Query:  QSPSLVTHACNPIGGFNVVEGWAISLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETA
        +SPS VT AC+P GG+ VVE WA   G A E+  W AH K   GP  L E     + ++E  A
Subjt:  QSPSLVTHACNPIGGFNVVEGWAISLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGGGAGATAGCTCAATCGCCGAGCCTGGTAACACACGCTTGTAACCCAATTGGGGGCTTTAATGTGGTTGAAGGATGGGCCATTTCATTGGGCCGGGCTTCGGA
AGAGATCTTCTGGCTTGCCCATTTCAAGAATGGAGTTGGGCCTTGTGTCTTGGGTGAAGGCCCAAGGTGCTCTGCCCTTAGATTGGAGGAAACCGCACGAGGCTGGTTTC
ACAGAGCAGTGTCACCTCCTGTTCTGGTGGTCAGTGAAAGGATAACGGGCTGGTTCTTCCAAATCCCAATTGTGCTCAATGTGACGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGGGAGATAGCTCAATCGCCGAGCCTGGTAACACACGCTTGTAACCCAATTGGGGGCTTTAATGTGGTTGAAGGATGGGCCATTTCATTGGGCCGGGCTTCGGA
AGAGATCTTCTGGCTTGCCCATTTCAAGAATGGAGTTGGGCCTTGTGTCTTGGGTGAAGGCCCAAGGTGCTCTGCCCTTAGATTGGAGGAAACCGCACGAGGCTGGTTTC
ACAGAGCAGTGTCACCTCCTGTTCTGGTGGTCAGTGAAAGGATAACGGGCTGGTTCTTCCAAATCCCAATTGTGCTCAATGTGACGCTCTAA
Protein sequenceShow/hide protein sequence
MKREIAQSPSLVTHACNPIGGFNVVEGWAISLGRASEEIFWLAHFKNGVGPCVLGEGPRCSALRLEETARGWFHRAVSPPVLVVSERITGWFFQIPIVLNVTL