CuGenDBv2

Gene ID	MS024001
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold44:1805847..1807517
RNA-Seq Expression	MS024001
Synteny	MS024001
Gene Ontology terms	NA
InterPro domains	IPR021489 - Protein of unknown function DUF3143

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576682.1 hypothetical protein SDJN03_24256, partial [Cucurbita argyrosperma subsp. sororia]

6.6e-76

87.2

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLC NVFPS  SN+PEIS IWR IS KL Q +NPIS SLRKS ++VSS+SSEAEELSAPEDEWL+KLPEKKKPLYSHSLPCIEAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QS EDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

XP_008439322.1 PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]

8.6e-76

86.59

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLCNNVFPS  SN+ EIS IWR IS KL Q  NPIS  LRK+FT+VSS+SSEAEELS+PEDEWL+KLPEKKKPLYSHSLPC+EAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QSKEDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

XP_022141250.1 uncharacterized protein LOC111011693 [Momordica charantia]

2.6e-88

100

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

XP_022922878.1 uncharacterized protein LOC111430721 [Cucurbita moschata]

1.9e-75

86.59

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLC NVFPS  SN+PEIS IWR IS KL Q +NPIS S RKS ++VSS+SSEAEELSAPEDEWL+KLPEKKKPLYSHSLPCIEAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QS EDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

XP_038880287.1 uncharacterized protein LOC120071904 [Benincasa hispida]

6.6e-76

86.59

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLCNNVFPS  SN+ EIS IWR IS KL Q  NPIS S RK+FT+VSS+SSEAEELS PEDEWL+KLPEKKKPLYSHSLPC+EAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QSKEDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AY50 uncharacterized protein LOC103484146

4.2e-76

86.59

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLCNNVFPS  SN+ EIS IWR IS KL Q  NPIS  LRK+FT+VSS+SSEAEELS+PEDEWL+KLPEKKKPLYSHSLPC+EAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QSKEDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

A0A5D3DHV1 Uncharacterized protein

4.2e-76

86.59

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLCNNVFPS  SN+ EIS IWR IS KL Q  NPIS  LRK+FT+VSS+SSEAEELS+PEDEWL+KLPEKKKPLYSHSLPC+EAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QSKEDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

A0A6J1CHI2 uncharacterized protein LOC111011693

1.3e-88

100

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

A0A6J1E806 uncharacterized protein LOC111430721

9.3e-76

86.59

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLC NVFPS  SN+PEIS IWR IS KL Q +NPIS S RKS ++VSS+SSEAEELSAPEDEWL+KLPEKKKPLYSHSLPCIEAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QS EDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

A0A6J1J9Q7 uncharacterized protein LOC111482568

7.9e-75

85.98

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Query:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY
        MSI FAF SLC NVFPS  SN+PEIS IWR IS KL Q +NPIS S RKS ++VSS+SSEAEELSA EDEWL+KLPEKKKPLYSHSLPCIEAWLK+LGFY
Subjt:  MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFY

Query:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        QS EDRA+WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Subjt:  QSKEDRALWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52960.1 unknown protein

5.6e-57

69.23

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Query:  VFPSSASNYP----EISPIWRSISPKLRQFQNPISHSL-RKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFYQSKEDRAL
        +FP + S+ P     I     SISP+ R F +  S ++ RK  TLVSS+SS+AEE+S  EDEWL KLPEK KPLYSHSLPCIEAWL+ LGFYQSK+DRA+
Subjt:  VFPSSASNYP----EISPIWRSISPKLRQFQNPISHSL-RKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFYQSKEDRAL

Query:  WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
        WLI+KP+WHAQLSLDVTDL IRY+KSGPGNLE+D+ERRFSYALSRED ENA+LGGP
Subjt:  WLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCCATCGCCTTCGCTTTTGGCTCTCTTTGTAACAATGTTTTCCCATCTTCTGCTTCAAATTATCCCGAAATTTCACCGATTTGGCGTTCCATTTCCCCTAAACTCCG
ACAATTCCAAAACCCCATCTCCCATTCCCTGAGGAAAAGCTTTACCCTTGTCTCTTCCAGGTCGTCCGAAGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAGCA
AGCTTCCGGAAAAGAAGAAGCCCCTCTACTCTCACAGCTTGCCCTGTATCGAGGCTTGGCTGAAGAGCTTAGGATTTTACCAGAGTAAAGAAGACCGAGCCCTGTGGCTA
ATCGAGAAGCCTGAATGGCACGCCCAGCTCTCCCTTGATGTCACCGACCTCTATATAAGATATCTGAAGAGTGGACCAGGAAATCTTGAGAAAGACGTTGAGAGGAGATT
TAGTTATGCACTAAGCAGAGAAGACATTGAAAATGCTGTTCTTGGAGGTCCTTGA

mRNA sequence

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Protein sequence

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MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSEAEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFYQSKEDRALWL
IEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

MS024001 (gene) of Bitter gourd (TR) v1 genome