| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046073.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.2e-08 | 32.64 | Show/hide |
Query: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
RT+TL S+A T ++E TYKRL E++ QKEK L F+C EKY+ DH+ E+R+
Subjt: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
Query: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
V +N+ + PG +K+RG L G +VIVL+DC AT+ F+S+
Subjt: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| KAA0063978.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.8e-08 | 32.41 | Show/hide |
Query: TRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK-----------------------------------
TRT+TL S+A ++E TYKRL E++ +KEK L F+C EKY+ DHR E+R+
Subjt: TRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK-----------------------------------
Query: -AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
V +N+ + PG +K+RG L G +VIVL+DC AT+ F+S+
Subjt: -AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| TYK09441.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-08 | 32.64 | Show/hide |
Query: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
RT+TL S+A T ++E TYKRL E++ QKEK L F+C EKY+ DH+ E+R+
Subjt: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
Query: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
V +N+ + PG +K+RG L G +VIVL+DC AT+ F+S+
Subjt: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| XP_022131713.1 uncharacterized protein LOC111004816 [Momordica charantia] | 9.5e-17 | 46.21 | Show/hide |
Query: MKTLESTLTRTVTLASKAGT-TTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHR----------------------------YCTDEE
+KT E+T TR+VTLASK GT T PT KKE YKRL +EYRK+ E L F+CE+KY+V HR DE+
Subjt: MKTLESTLTRTVTLASKAGT-TTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHR----------------------------YCTDEE
Query: RKAVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFIS
KAV+ LNT + TT GMIKI+G LQG+ V+VLLDC A + FIS
Subjt: RKAVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFIS
|
|
| XP_022154744.1 uncharacterized protein LOC111021922 [Momordica charantia] | 6.0e-11 | 34.69 | Show/hide |
Query: KTLESTLTRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERKAVMCR-----------------------
KT E+ TRTVTL+ K+ TA +KE T K+L EY+++K+K L F+ EEKY++ HR C ++E K +
Subjt: KTLESTLTRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERKAVMCR-----------------------
Query: --------LNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
LNT + +TPG +K+RG ++ ++V++L+DC AT+ FISQ
Subjt: --------LNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TR82 Transposon Ty3-G Gag-Pol polyprotein | 6.0e-09 | 32.64 | Show/hide |
Query: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
RT+TL S+A T ++E TYKRL E++ QKEK L F+C EKY+ DH+ E+R+
Subjt: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
Query: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
V +N+ + PG +K+RG L G +VIVL+DC AT+ F+S+
Subjt: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| A0A5D3BZJ8 Ty3/gypsy retrotransposon protein | 1.3e-08 | 32.41 | Show/hide |
Query: TRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK-----------------------------------
TRT+TL S+A ++E TYKRL E++ +KEK L F+C EKY+ DHR E+R+
Subjt: TRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK-----------------------------------
Query: -AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
V +N+ + PG +K+RG L G +VIVL+DC AT+ F+S+
Subjt: -AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| A0A5D3CC95 Ty3/gypsy retrotransposon protein | 6.0e-09 | 32.64 | Show/hide |
Query: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
RT+TL S+A T ++E TYKRL E++ QKEK L F+C EKY+ DH+ E+R+
Subjt: RTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERK------------------------------------
Query: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
V +N+ + PG +K+RG L G +VIVL+DC AT+ F+S+
Subjt: AVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
| A0A6J1BU87 uncharacterized protein LOC111004816 | 4.6e-17 | 46.21 | Show/hide |
Query: MKTLESTLTRTVTLASKAGT-TTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHR----------------------------YCTDEE
+KT E+T TR+VTLASK GT T PT KKE YKRL +EYRK+ E L F+CE+KY+V HR DE+
Subjt: MKTLESTLTRTVTLASKAGT-TTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHR----------------------------YCTDEE
Query: RKAVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFIS
KAV+ LNT + TT GMIKI+G LQG+ V+VLLDC A + FIS
Subjt: RKAVMCRLNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFIS
|
|
| A0A6J1DN22 Reverse transcriptase | 2.9e-11 | 34.69 | Show/hide |
Query: KTLESTLTRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERKAVMCR-----------------------
KT E+ TRTVTL+ K+ TA +KE T K+L EY+++K+K L F+ EEKY++ HR C ++E K +
Subjt: KTLESTLTRTVTLASKAGTTTPIDTAPTAKKEATYKRLIVDEYRKQKEKSLSFKCEEKYTVDHRYCTDEERKAVMCR-----------------------
Query: --------LNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
LNT + +TPG +K+RG ++ ++V++L+DC AT+ FISQ
Subjt: --------LNTSMSKTTPGMIKIRGTLQGRDVIVLLDCRATNKFISQ
|
|
