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MS024050 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024050
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNatterin-3 like
Genome locationscaffold93:1377701..1378324
RNA-Seq ExpressionMS024050
SyntenyMS024050
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR004991 - Aerolysin-like toxin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460185.1 PREDICTED: uncharacterized protein LOC103499071 [Cucumis melo]1.0e-3652.1Show/hide
Query:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA
        ++LDNDSS    DP  LFWPIKL  N  A RS  + R    +        +  + DL+ I D AK+EV++ VL+  IYNV FHLSDAR YNE+P+ MTS 
Subjt:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA

Query:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFED-YSWGK
         VENNNS+D+K ++KLSY+DTTTSTW  NVN  +GIKM   T VPKVSE  +E  +++ ED Y+WG+
Subjt:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFED-YSWGK

XP_022155408.1 uncharacterized protein LOC111022556 [Momordica charantia]1.7e-3651.25Show/hide
Query:  DNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENN
        +N ++D H    +LFWPIK+ +N  A RSM NN   KRL  D   N L      ITDEA+MEVVELV++ EIYN++FHLSDARVYNE+P+ + +   EN 
Subjt:  DNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENN

Query:  NSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWG
            +K+S+KLSYEDT T+TW ++++   G+K+++ TGVPK+SEG +E+SAE  E+Y WG
Subjt:  NSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWG

XP_022155428.1 uncharacterized protein LOC111022575 [Momordica charantia]6.0e-6679.63Show/hide
Query:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDFNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVEN
        +ILDN SSD+HVDPKSLFWPIKL DNT A R+M NN FL+R+ +D NR+  D DYITDEAKMEVVELVL+ EIYNVHFHLSDARVYNEQP+SMTSA VEN
Subjt:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDFNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVEN

Query:  NNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK
        NNSEDQKLSMKLSYEDTTTSTWSANVN T G+K++I TGVPKVSEG VE+SAEI E Y+WGK
Subjt:  NNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK

XP_022157617.1 uncharacterized protein LOC111024278 [Momordica charantia]1.5e-3249.06Show/hide
Query:  DPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENNNSEDQKLSM
        D K+LFWP+K+ D+  A R   NN F+K +  D   + L   L  ITD AK EV ELVL+ +IYN +F LSDAR+YNE+PI +TS  VEN      K+S+
Subjt:  DPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENNNSEDQKLSM

Query:  KLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK-HTNSNI
        KL YEDT T TWS++V+  +G+K+++ TGVP + E  +E+SAEI E+++WG+   N NI
Subjt:  KLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK-HTNSNI

XP_038875088.1 uncharacterized protein LOC120067616 [Benincasa hispida]1.0e-4963.25Show/hide
Query:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA
        ++LD++ S    DP++LFWP+KL +N  A R+ +NN F KRL + F    N L   LDYIT EA +EV ELVL+  IYNV FHLSDAR +NE+PIS+TS 
Subjt:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA

Query:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK
         VENNNSE QK S+KLSYEDTTTSTW+ANVN T G+KM+I TGVPKVSEG VE+ AEI EDY+WGK
Subjt:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK

TrEMBL top hitse value%identityAlignment
A0A1S3CD76 uncharacterized protein LOC1034990714.8e-3752.1Show/hide
Query:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA
        ++LDNDSS    DP  LFWPIKL  N  A RS  + R    +        +  + DL+ I D AK+EV++ VL+  IYNV FHLSDAR YNE+P+ MTS 
Subjt:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA

Query:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFED-YSWGK
         VENNNS+D+K ++KLSY+DTTTSTW  NVN  +GIKM   T VPKVSE  +E  +++ ED Y+WG+
Subjt:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFED-YSWGK

A0A5D3DMB4 Agglutinin domain-containing protein4.8e-3752.1Show/hide
Query:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA
        ++LDNDSS    DP  LFWPIKL  N  A RS  + R    +        +  + DL+ I D AK+EV++ VL+  IYNV FHLSDAR YNE+P+ MTS 
Subjt:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDF----NRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSA

Query:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFED-YSWGK
         VENNNS+D+K ++KLSY+DTTTSTW  NVN  +GIKM   T VPKVSE  +E  +++ ED Y+WG+
Subjt:  FVENNNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFED-YSWGK

A0A6J1DMV7 uncharacterized protein LOC1110225568.2e-3751.25Show/hide
Query:  DNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENN
        +N ++D H    +LFWPIK+ +N  A RSM NN   KRL  D   N L      ITDEA+MEVVELV++ EIYN++FHLSDARVYNE+P+ + +   EN 
Subjt:  DNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENN

Query:  NSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWG
            +K+S+KLSYEDT T+TW ++++   G+K+++ TGVPK+SEG +E+SAE  E+Y WG
Subjt:  NSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWG

A0A6J1DMX7 uncharacterized protein LOC1110225752.9e-6679.63Show/hide
Query:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDFNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVEN
        +ILDN SSD+HVDPKSLFWPIKL DNT A R+M NN FL+R+ +D NR+  D DYITDEAKMEVVELVL+ EIYNVHFHLSDARVYNEQP+SMTSA VEN
Subjt:  MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDFNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVEN

Query:  NNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK
        NNSEDQKLSMKLSYEDTTTSTWSANVN T G+K++I TGVPKVSEG VE+SAEI E Y+WGK
Subjt:  NNSEDQKLSMKLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK

A0A6J1DUY5 uncharacterized protein LOC1110242787.2e-3349.06Show/hide
Query:  DPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENNNSEDQKLSM
        D K+LFWP+K+ D+  A R   NN F+K +  D   + L   L  ITD AK EV ELVL+ +IYN +F LSDAR+YNE+PI +TS  VEN      K+S+
Subjt:  DPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDD--FNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENNNSEDQKLSM

Query:  KLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK-HTNSNI
        KL YEDT T TWS++V+  +G+K+++ TGVP + E  +E+SAEI E+++WG+   N NI
Subjt:  KLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGK-HTNSNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGGACAATGATTCTTCTGATGATCACGTGGATCCTAAATCTTTATTCTGGCCCATCAAACTTACTGATAATACAGCGGCCTTCCGTAGCATGGCAAACAATCG
CTTTCTCAAGAGATTGGGCGATGATTTTAATCGTCTCAAACCTGATCTTGATTACATCACTGATGAAGCAAAAATGGAAGTCGTGGAGCTCGTGCTTACGTGGGAGATTT
ACAACGTCCATTTCCATCTTTCTGATGCGAGAGTGTACAACGAGCAGCCCATTTCCATGACAAGCGCTTTCGTTGAAAACAACAACTCCGAGGACCAAAAGCTGAGCATG
AAGCTATCGTATGAAGACACGACAACCTCAACTTGGAGCGCCAATGTGAATGCGACAATGGGCATCAAAATGAGCATTGCAACCGGTGTTCCTAAGGTTTCAGAAGGAAC
AGTGGAAGTTTCAGCTGAGATATTTGAGGACTACTCATGGGGGAAACACACCAATTCAAATATCTCGCGGAGGTTGTCCACGACATTGTGGTACCTGCAGGGGCCAAAGT
TAAGGGCAGCATATTGGCGACACAAGCGACGTGTGATGTTCCTTTTTCGTACTCTCAACGGGACAAACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATATTGGACAATGATTCTTCTGATGATCACGTGGATCCTAAATCTTTATTCTGGCCCATCAAACTTACTGATAATACAGCGGCCTTCCGTAGCATGGCAAACAATCG
CTTTCTCAAGAGATTGGGCGATGATTTTAATCGTCTCAAACCTGATCTTGATTACATCACTGATGAAGCAAAAATGGAAGTCGTGGAGCTCGTGCTTACGTGGGAGATTT
ACAACGTCCATTTCCATCTTTCTGATGCGAGAGTGTACAACGAGCAGCCCATTTCCATGACAAGCGCTTTCGTTGAAAACAACAACTCCGAGGACCAAAAGCTGAGCATG
AAGCTATCGTATGAAGACACGACAACCTCAACTTGGAGCGCCAATGTGAATGCGACAATGGGCATCAAAATGAGCATTGCAACCGGTGTTCCTAAGGTTTCAGAAGGAAC
AGTGGAAGTTTCAGCTGAGATATTTGAGGACTACTCATGGGGGAAACACACCAATTCAAATATCTCGCGGAGGTTGTCCACGACATTGTGGTACCTGCAGGGGCCAAAGT
TAAGGGCAGCATATTGGCGACACAAGCGACGTGTGATGTTCCTTTTTCGTACTCTCAACGGGACAAACTCATGA
Protein sequenceShow/hide protein sequence
MILDNDSSDDHVDPKSLFWPIKLTDNTAAFRSMANNRFLKRLGDDFNRLKPDLDYITDEAKMEVVELVLTWEIYNVHFHLSDARVYNEQPISMTSAFVENNNSEDQKLSM
KLSYEDTTTSTWSANVNATMGIKMSIATGVPKVSEGTVEVSAEIFEDYSWGKHTNSNISRRLSTTLWYLQGPKLRAAYWRHKRRVMFLFRTLNGTNS