; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024051 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024051
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold93:1378497..1379036
RNA-Seq ExpressionMS024051
SyntenyMS024051
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008998 - Agglutinin domain
IPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460185.1 PREDICTED: uncharacterized protein LOC103499071 [Cucumis melo]5.6e-4450.55Show/hide
Query:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL
        MS  PR F+LKS+SNN +LRYV+  +E+ GFLQ+S  +A SPYT FE+E+S+ G G+VHIRCCYNNKYW L SPSS YIVATA E+DE  S+ SCTLFK 
Subjt:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL

Query:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRS-NNDRYL
         + D+D ++D       RFRH+ LN  +  +P     +  C+ +     +  ++LST++NWDT   LP++VAF+S  N++YL
Subjt:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRS-NNDRYL

XP_022155408.1 uncharacterized protein LOC111022556 [Momordica charantia]5.2e-5055.87Show/hide
Query:  IPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYHN
        +P  FALKSV N  +L +V ++ E+ G+LQ+S D+ +SPYTKFE+E S  GKGF HIRCC+NN+YWVLHS SSHYIVA A++ DEDQSK +CTLFK  + 
Subjt:  IPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYHN

Query:  DDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL
              DDG     RFR+ HLNRNLHL  + FG H+ C+F  + +   D SDL T+V+WD+L ILP+YVAF+ +N RYL
Subjt:  DDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL

XP_022155428.1 uncharacterized protein LOC111022575 [Momordica charantia]5.9e-7875.98Show/hide
Query:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL
        +S IPRHFALKSVSNNS+L+YVNEE+EVRGFLQYS DQA++PYTKFE+EKSN+G+ FVHI+CCYNNKYWVLHSPSSHYIVATA+ERDED+SKPSCTLFKL
Subjt:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL

Query:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPFGRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRSNNDRYL
         + DDD+++D  + K +RFRH+HLN NL LKPFG H+GC+FVGA +++  SDLST+VNWDTLFILPKYVAF+SNN+ YL
Subjt:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPFGRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRSNNDRYL

XP_022157617.1 uncharacterized protein LOC111024278 [Momordica charantia]1.2e-4654.44Show/hide
Query:  IPRHFALKSVSNNSHLRYV-NEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYH
        +P  FALKSVSNN +L +V  E+ E+ G+LQ+  DQAVSPYTKFE+E S +GKG VHIRCCYNN+YWVL S SSHYIVA A+  DEDQ+K +CTLF+   
Subjt:  IPRHFALKSVSNNSHLRYV-NEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYH

Query:  NDDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL
        +D         + A RFR++HL+RN+HL  + +G H  C+F  +     D SDL+T V+W++L ILPKYVAF+  N  YL
Subjt:  NDDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL

XP_038875088.1 uncharacterized protein LOC120067616 [Benincasa hispida]1.5e-5761.88Show/hide
Query:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL
        MS IPR+FALKS+SNN  LRYV E++E+ GFLQ+S ++ VSPYTKFE+EKSNIGKG+VHIRCCYNNKYWVL S SSHYIVATA+ER+EDQSK SCTLFK 
Subjt:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL

Query:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSP----DSDLSTIVNWDTLFILPKYVAFRSNN
         ++D    N+D      RF+H++LN N+HLK     +++GC+ V A K  P    +++ ST +NWDTLFILPKYVAF+ N+
Subjt:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSP----DSDLSTIVNWDTLFILPKYVAFRSNN

TrEMBL top hitse value%identityAlignment
A0A1S3CD76 uncharacterized protein LOC1034990712.7e-4450.55Show/hide
Query:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL
        MS  PR F+LKS+SNN +LRYV+  +E+ GFLQ+S  +A SPYT FE+E+S+ G G+VHIRCCYNNKYW L SPSS YIVATA E+DE  S+ SCTLFK 
Subjt:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL

Query:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRS-NNDRYL
         + D+D ++D       RFRH+ LN  +  +P     +  C+ +     +  ++LST++NWDT   LP++VAF+S  N++YL
Subjt:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRS-NNDRYL

A0A5D3DMB4 Agglutinin domain-containing protein2.7e-4450.55Show/hide
Query:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL
        MS  PR F+LKS+SNN +LRYV+  +E+ GFLQ+S  +A SPYT FE+E+S+ G G+VHIRCCYNNKYW L SPSS YIVATA E+DE  S+ SCTLFK 
Subjt:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL

Query:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRS-NNDRYL
         + D+D ++D       RFRH+ LN  +  +P     +  C+ +     +  ++LST++NWDT   LP++VAF+S  N++YL
Subjt:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPF--GRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRS-NNDRYL

A0A6J1DMV7 uncharacterized protein LOC1110225562.5e-5055.87Show/hide
Query:  IPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYHN
        +P  FALKSV N  +L +V ++ E+ G+LQ+S D+ +SPYTKFE+E S  GKGF HIRCC+NN+YWVLHS SSHYIVA A++ DEDQSK +CTLFK  + 
Subjt:  IPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYHN

Query:  DDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL
              DDG     RFR+ HLNRNLHL  + FG H+ C+F  + +   D SDL T+V+WD+L ILP+YVAF+ +N RYL
Subjt:  DDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL

A0A6J1DMX7 uncharacterized protein LOC1110225752.9e-7875.98Show/hide
Query:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL
        +S IPRHFALKSVSNNS+L+YVNEE+EVRGFLQYS DQA++PYTKFE+EKSN+G+ FVHI+CCYNNKYWVLHSPSSHYIVATA+ERDED+SKPSCTLFKL
Subjt:  MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKL

Query:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPFGRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRSNNDRYL
         + DDD+++D  + K +RFRH+HLN NL LKPFG H+GC+FVGA +++  SDLST+VNWDTLFILPKYVAF+SNN+ YL
Subjt:  YHNDDDEENDDGDRKALRFRHIHLNRNLHLKPFGRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRSNNDRYL

A0A6J1DUY5 uncharacterized protein LOC1110242785.8e-4754.44Show/hide
Query:  IPRHFALKSVSNNSHLRYV-NEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYH
        +P  FALKSVSNN +L +V  E+ E+ G+LQ+  DQAVSPYTKFE+E S +GKG VHIRCCYNN+YWVL S SSHYIVA A+  DEDQ+K +CTLF+   
Subjt:  IPRHFALKSVSNNSHLRYV-NEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYH

Query:  NDDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL
        +D         + A RFR++HL+RN+HL  + +G H  C+F  +     D SDL+T V+W++L ILPKYVAF+  N  YL
Subjt:  NDDDEENDDGDRKALRFRHIHLNRNLHL--KPFGRHEGCIFVGAVKTSPD-SDLSTIVNWDTLFILPKYVAFRSNNDRYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAAATCCCAAGGCATTTTGCCCTAAAATCTGTTTCCAACAATTCACATCTCCGCTATGTTAATGAAGAAAGTGAAGTCCGTGGATTTCTCCAATACTCTAGAGA
TCAAGCGGTGAGTCCATACACAAAGTTTGAGGTCGAAAAATCCAACATTGGGAAGGGATTCGTGCACATAAGATGTTGTTACAACAACAAATATTGGGTTCTCCACTCCC
CATCCTCCCACTACATCGTCGCAACCGCCGAAGAACGAGACGAAGATCAATCAAAACCCTCTTGCACCCTATTCAAGTTGTATCACAACGACGATGATGAGGAGAATGAT
GACGGCGACCGCAAGGCACTCCGCTTTCGACACATCCATCTCAATCGTAACCTTCACTTGAAACCCTTTGGACGACATGAAGGTTGCATATTCGTGGGAGCTGTAAAAAC
CAGCCCGGACTCTGATCTCTCCACCATTGTCAATTGGGACACATTGTTCATACTTCCCAAATACGTGGCCTTCAGGAGCAACAACGACCGCTACCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAAATCCCAAGGCATTTTGCCCTAAAATCTGTTTCCAACAATTCACATCTCCGCTATGTTAATGAAGAAAGTGAAGTCCGTGGATTTCTCCAATACTCTAGAGA
TCAAGCGGTGAGTCCATACACAAAGTTTGAGGTCGAAAAATCCAACATTGGGAAGGGATTCGTGCACATAAGATGTTGTTACAACAACAAATATTGGGTTCTCCACTCCC
CATCCTCCCACTACATCGTCGCAACCGCCGAAGAACGAGACGAAGATCAATCAAAACCCTCTTGCACCCTATTCAAGTTGTATCACAACGACGATGATGAGGAGAATGAT
GACGGCGACCGCAAGGCACTCCGCTTTCGACACATCCATCTCAATCGTAACCTTCACTTGAAACCCTTTGGACGACATGAAGGTTGCATATTCGTGGGAGCTGTAAAAAC
CAGCCCGGACTCTGATCTCTCCACCATTGTCAATTGGGACACATTGTTCATACTTCCCAAATACGTGGCCTTCAGGAGCAACAACGACCGCTACCTTTGA
Protein sequenceShow/hide protein sequence
MSKIPRHFALKSVSNNSHLRYVNEESEVRGFLQYSRDQAVSPYTKFEVEKSNIGKGFVHIRCCYNNKYWVLHSPSSHYIVATAEERDEDQSKPSCTLFKLYHNDDDEEND
DGDRKALRFRHIHLNRNLHLKPFGRHEGCIFVGAVKTSPDSDLSTIVNWDTLFILPKYVAFRSNNDRYL