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MS024053 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024053
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold93:1397630..1397854
RNA-Seq ExpressionMS024053
SyntenyMS024053
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039763.1 uncharacterized protein E6C27_scaffold122G00260 [Cucumis melo var. makuwa]7.5e-1963.89Show/hide
Query:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        MSC ST+T+PPMSKVK+N VVKRGFC++PFSY Q +   +GQ+  + Y DG+F+GF+SY FQ RTDKE LPV
Subjt:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

XP_022155409.1 uncharacterized protein LOC111022557 [Momordica charantia]1.6e-2473.61Show/hide
Query:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        MSC+ST+T+PPMSKVKMN +VKRGFC++PFSYT+IDTL+DG QISREY+DG+F+G  SYDFQFR+DK  LP+
Subjt:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

XP_022157630.1 uncharacterized protein LOC111024291 [Momordica charantia]3.7e-2695.24Show/hide
Query:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDF
        MLMSCTSTVTIPPMSKVKMNTVVKRGFCD+PF YTQIDTL+DGQQISREYEDGLFSGFHSYDF
Subjt:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDF

XP_038906851.1 uncharacterized protein LOC120092742 [Benincasa hispida]9.4e-2266.22Show/hide
Query:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        +LM+C+ST+T+PPMSKVK++ VVKRGFC++P+SYTQ DTL+DGQQ + EYEDG+FSG +SY F  RTDK  LP+
Subjt:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

XP_038906982.1 uncharacterized protein LOC120092830 [Benincasa hispida]3.2e-2267.57Show/hide
Query:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        +LM+C+ST+T+PPMSKVK++ VVKRGFC++P+SYT+ DTL+DGQQ + EYEDG+FSG +SY FQ RTDK  LPV
Subjt:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

TrEMBL top hitse value%identityAlignment
A0A0A0KFN1 Agglutinin domain-containing protein8.0e-1960.81Show/hide
Query:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        +LMSC ST+T+PP SKVK+N VVKRGFC++PFSYTQI+T  +G+  ++ Y DG+F+G +SY FQ  TDK  LPV
Subjt:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

A0A1S4E2M9 uncharacterized protein LOC1034990723.6e-1963.89Show/hide
Query:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        MSC ST+T+PPMSKVK+N VVKRGFC++PFSY Q +   +GQ+  + Y DG+F+GF+SY FQ RTDKE LPV
Subjt:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

A0A5D3DM66 Agglutinin domain-containing protein3.6e-1963.89Show/hide
Query:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        MSC ST+T+PPMSKVK+N VVKRGFC++PFSY Q +   +GQ+  + Y DG+F+GF+SY FQ RTDKE LPV
Subjt:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

A0A6J1DQ71 uncharacterized protein LOC1110225577.5e-2573.61Show/hide
Query:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV
        MSC+ST+T+PPMSKVKMN +VKRGFC++PFSYT+IDTL+DG QISREY+DG+F+G  SYDFQFR+DK  LP+
Subjt:  MSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV

A0A6J1DTM1 uncharacterized protein LOC1110242911.8e-2695.24Show/hide
Query:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDF
        MLMSCTSTVTIPPMSKVKMNTVVKRGFCD+PF YTQIDTL+DGQQISREYEDGLFSGFHSYDF
Subjt:  MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATGTCCTGCACCAGCACTGTGACGATACCTCCAATGTCGAAAGTGAAGATGAATACGGTCGTAAAACGAGGGTTTTGCGATATCCCGTTTTCGTATACTCAGAT
TGACACGCTCCAAGATGGACAACAGATCTCCCGGGAGTACGAGGACGGACTTTTCTCTGGCTTCCATTCCTACGACTTCCAGTTTCGGACCGATAAGGAACCACTGCCGG
TGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATGTCCTGCACCAGCACTGTGACGATACCTCCAATGTCGAAAGTGAAGATGAATACGGTCGTAAAACGAGGGTTTTGCGATATCCCGTTTTCGTATACTCAGAT
TGACACGCTCCAAGATGGACAACAGATCTCCCGGGAGTACGAGGACGGACTTTTCTCTGGCTTCCATTCCTACGACTTCCAGTTTCGGACCGATAAGGAACCACTGCCGG
TGTGA
Protein sequenceShow/hide protein sequence
MLMSCTSTVTIPPMSKVKMNTVVKRGFCDIPFSYTQIDTLQDGQQISREYEDGLFSGFHSYDFQFRTDKEPLPV