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MS024077 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024077
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold414:223399..223911
RNA-Seq ExpressionMS024077
SyntenyMS024077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155409.1 uncharacterized protein LOC111022557 [Momordica charantia]1.8e-2866.67Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR
        G+G+++VS   G  Y+WGET K+K  MSC++T+T+PPMSKVKMNA+VKRGFC+VPFS T+IDTLRDG QISREY+D +F+ + SYDFQFR
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR

XP_022157622.1 uncharacterized protein LOC111024282 [Momordica charantia]1.5e-1750Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR
        G G + V  E+GA Y WG THK K +   T  VT+PPMS+VK+NAV+K+G C VPFS  + D LR G+Q+     D LF+ ++SYDF+F+
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR

XP_022157630.1 uncharacterized protein LOC111024291 [Momordica charantia]2.4e-3688.51Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDF
        GNGN+SVSFE GAAYSWGETHKQKMLMSCT+TVT+PPMSKVKMN VVKRGFCDVPF  TQIDTLRDGQQISREYED LFS  HSYDF
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDF

XP_038906851.1 uncharacterized protein LOC120092742 [Benincasa hispida]1.3e-2663.33Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR
        G+  V + FEVG +YSWGETHK K+LM+C++T+T+PPMSKVK++ VVKRGFC+VP+S TQ DTLRDGQQ + EYED +FS ++SY F  R
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR

XP_038906982.1 uncharacterized protein LOC120092830 [Benincasa hispida]1.0e-2663.33Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR
        G+  V + FEVG +YSWGETHK K+LM+C++T+T+PPMSKVK++ VVKRGFC+VP+S T+ DTLRDGQQ + EYED +FS ++SY FQ R
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR

TrEMBL top hitse value%identityAlignment
A0A0A0KFN1 Agglutinin domain-containing protein1.0e-1651.14Show/hide
Query:  NGNVSVSFEVGAAYSWGET-HKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQ
        +G V     +G  Y+W ET  K K+LMSC +T+T+PP SKVK+N VVKRGFC+VPFS TQI+T  +G+  ++ Y D +F+ ++SY FQ
Subjt:  NGNVSVSFEVGAAYSWGET-HKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQ

A0A6J1DMW2 uncharacterized protein LOC1110225611.2e-1748.31Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQF
        G G + VS E+G+ Y WGETHK K  +     VT+PP+S+VK+NAVVK+G C VPFS  + D L++G+++     D LFS ++SYD++F
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQF

A0A6J1DQ71 uncharacterized protein LOC1110225578.8e-2966.67Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR
        G+G+++VS   G  Y+WGET K+K  MSC++T+T+PPMSKVKMNA+VKRGFC+VPFS T+IDTLRDG QISREY+D +F+ + SYDFQFR
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR

A0A6J1DTM1 uncharacterized protein LOC1110242911.2e-3688.51Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDF
        GNGN+SVSFE GAAYSWGETHKQKMLMSCT+TVT+PPMSKVKMN VVKRGFCDVPF  TQIDTLRDGQQISREYED LFS  HSYDF
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDF

A0A6J1DUY9 uncharacterized protein LOC1110242827.0e-1850Show/hide
Query:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR
        G G + V  E+GA Y WG THK K +   T  VT+PPMS+VK+NAV+K+G C VPFS  + D LR G+Q+     D LF+ ++SYDF+F+
Subjt:  GNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKRGFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCAAAATCTATGGCGAGAGGGTTTGGTCAATGGCCAAAGGAGATGCCACAAACAAAACTAACACAGCCGACACTGTCCAATTCACATTCACTTTTGAGGACAAA
AGGAAGAGCGGTTGGACCAGCACATTGGGTGCTAGATTTGGTGTCTCAAAAACATTCTCTGCCGGGATTCCATGGAAATGGAAATGTTAGTGTTTCTTTTGAGGTTGGTG
CAGCATATTCATGGGGAGAAACACATAAACAAAAAATGTTGATGTCCTGCACCAACACTGTGACGATGCCTCCAATGTCGAAAGTGAAGATGAATGCAGTTGTAAAACGG
GGCTTTTGCGATGTCCCGTTTTCGTGTACTCAGATCGACACGCTCCGAGATGGACAACAGATCTCCCGGGAGTACGAGGACAAACTTTTCTCTAACTTGCATTCCTACGA
CTTTCAGTTTCGGCCGATAAGGAACCACTGCCGGTGTGAAAAGGTAACCTACCTTGGCTTGTTTGCGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCAAAATCTATGGCGAGAGGGTTTGGTCAATGGCCAAAGGAGATGCCACAAACAAAACTAACACAGCCGACACTGTCCAATTCACATTCACTTTTGAGGACAAA
AGGAAGAGCGGTTGGACCAGCACATTGGGTGCTAGATTTGGTGTCTCAAAAACATTCTCTGCCGGGATTCCATGGAAATGGAAATGTTAGTGTTTCTTTTGAGGTTGGTG
CAGCATATTCATGGGGAGAAACACATAAACAAAAAATGTTGATGTCCTGCACCAACACTGTGACGATGCCTCCAATGTCGAAAGTGAAGATGAATGCAGTTGTAAAACGG
GGCTTTTGCGATGTCCCGTTTTCGTGTACTCAGATCGACACGCTCCGAGATGGACAACAGATCTCCCGGGAGTACGAGGACAAACTTTTCTCTAACTTGCATTCCTACGA
CTTTCAGTTTCGGCCGATAAGGAACCACTGCCGGTGTGAAAAGGTAACCTACCTTGGCTTGTTTGCGTGGTGA
Protein sequenceShow/hide protein sequence
MMPKSMARGFGQWPKEMPQTKLTQPTLSNSHSLLRTKGRAVGPAHWVLDLVSQKHSLPGFHGNGNVSVSFEVGAAYSWGETHKQKMLMSCTNTVTMPPMSKVKMNAVVKR
GFCDVPFSCTQIDTLRDGQQISREYEDKLFSNLHSYDFQFRPIRNHCRCEKVTYLGLFAW