; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024089 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024089
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive GH3 family protein
Genome locationscaffold26:332514..337510
RNA-Seq ExpressionMS024089
SyntenyMS024089
Gene Ontology termsNA
InterPro domainsIPR004993 - GH3 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2979261.1 Hypothetical predicted protein [Olea europaea subsp. europaea]6.5e-2964.29Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK    A    E + +V EKNK T+QFIED+T NADQVQ  VLAEILSRNA  EYL R+GL  ++  ETFKK +P+++Y+ I PDITR+ANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCS PISEFLT
Subjt:  ILCSSPISEFLT

CAA3002405.1 Hypothetical predicted protein [Olea europaea subsp. europaea]3.8e-2966.07Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK     +   E + +V EKNK T+QFIED+TANADQVQ  VLAEILSRNA  EYL R+GL  ++  ETFKK +P+I+Y+ I PDITRIANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCS PISEFLT
Subjt:  ILCSSPISEFLT

XP_019196233.1 PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Ipomoea nil]5.0e-2966.07Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK C     EEE +  V  +NK  +QFIEDIT NADQVQ  VLAEILSRNA  EYL RHGL  +   +TFKKT+P+I+Y+ I PDI RIANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCS PISEFLT
Subjt:  ILCSSPISEFLT

XP_022142856.1 indole-3-acetic acid-amido synthetase GH3.6-like [Momordica charantia]4.6e-5196.43Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPKR VNAKVEEEAQKEVLEKNKATIQFIED+TANADQVQ CVL EILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCSSPISEFLT
Subjt:  ILCSSPISEFLT

XP_022880124.1 indole-3-acetic acid-amido synthetase GH3.6 [Olea europaea var. sylvestris]6.5e-2964.29Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK    A    E + +V EKNK T+QFIED+T NADQVQ  VLAEILSRNA  EYL R+GL  ++  ETFKK +P+++Y+ I PDITR+ANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCS PISEFLT
Subjt:  ILCSSPISEFLT

TrEMBL top hitse value%identityAlignment
A0A2R6QWX6 Indole-3-acetic acid-amido synthetase1.6e-2862.5Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK+ VN   +      + EKNK T+QFIED+T N D+VQ  VLAEILSR+A  EYL RHGL  ++  +TFKK +P+I Y+ I PDITRIANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCS PISEFLT
Subjt:  ILCSSPISEFLT

A0A6J1CDU3 indole-3-acetic acid-amido synthetase GH3.6-like5.4e-2973.12Show/hide
Query:  EVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        ++LEKNK ++QFIED+TANADQVQ  VLAEILSRNA  EYL RHGL  ++  +TFK T+P+ISY+ I PDI RIANGDSSPILCSSPISEFLT
Subjt:  EVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

A0A6J1CNF7 indole-3-acetic acid-amido synthetase GH3.6-like2.2e-5196.43Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPKR VNAKVEEEAQKEVLEKNKATIQFIED+TANADQVQ CVL EILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCSSPISEFLT
Subjt:  ILCSSPISEFLT

A0A6J1F6T2 indole-3-acetic acid-amido synthetase GH3.6-like4.5e-2873.12Show/hide
Query:  EVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        ++L++NK T+QFIED+TANA QVQ  VLAEILSRNA  EYL RHGL   + P+TFKKTIP+ISY+ I  DI RIANGDSSPILCSSPISEFLT
Subjt:  EVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

A0A7J0DEC6 Auxin-responsive GH3 family protein1.6e-2862.5Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK+ VN   +      + EKNK T+QFIED+T N D+VQ  VLAEILSR+A  EYL RHGL  ++  +TFKK +P+I Y+ I PDITRIANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        ILCS PISEFLT
Subjt:  ILCSSPISEFLT

SwissProt top hitse value%identityAlignment
O81829 Indole-3-acetic acid-amido synthetase GH3.55.0e-2455.36Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK+    +  E     + +KNK  +Q IE++T+NADQVQ  VL EIL+RNA  EYL RH L   +  ETFK  +P+I+Y+ I P+I RIANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        IL S PISEFLT
Subjt:  ILCSSPISEFLT

O82333 Probable indole-3-acetic acid-amido synthetase GH3.14.9e-1954.44Show/hide
Query:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        EK+   ++FIE++T NAD VQ  +LAEIL+RNA  EYL R  L   +  +TFK  IP+I+Y+ + P+I RIA+GD SPIL + PISEFLT
Subjt:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

P0C0M2 Probable indole-3-acetic acid-amido synthetase GH3.21.2e-1748.89Show/hide
Query:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        E++   ++FIE++T   D VQ  VLA IL+RN  AEYL RHG+   +  E FK  +P+++Y+ + P+I RIANGD S I+ S PI+EFLT
Subjt:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

Q9LSQ4 Indole-3-acetic acid-amido synthetase GH3.68.3e-2757.14Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK        E + + + EKNK  +QFIED+T NAD VQ  VL EILSRNA  EYL RHGL   +  ETFK  +P+++Y+ I P+I RIANGD S 
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        +LCS+PISEFLT
Subjt:  ILCSSPISEFLT

Q9SZT9 Indole-3-acetic acid-amido synthetase GH3.21.6e-1750Show/hide
Query:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        EK+   ++FIE++T N D VQ  VL EIL+RN++ EYL R  L      +TFK  +P+++Y+ + P+I RI+NGD SPIL S PI+EFLT
Subjt:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

Arabidopsis top hitse value%identityAlignment
AT2G14960.1 Auxin-responsive GH3 family protein3.4e-2054.44Show/hide
Query:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        EK+   ++FIE++T NAD VQ  +LAEIL+RNA  EYL R  L   +  +TFK  IP+I+Y+ + P+I RIA+GD SPIL + PISEFLT
Subjt:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

AT2G23170.1 Auxin-responsive GH3 family protein1.9e-1842.37Show/hide
Query:  KNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLTRHPINSRTTDN
        K+   ++FIE++T N D VQ  V+ EILSRN+  EYL R GL+  +  +TFK  +P++ YD + P+I RIANGD S IL S PI+EFLT    ++     
Subjt:  KNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLTRHPINSRTTDN

Query:  IMVWHLLPSPSSDKDQKR
             L+P+   D D+++
Subjt:  IMVWHLLPSPSSDKDQKR

AT4G27260.1 Auxin-responsive GH3 family protein3.6e-2555.36Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK+    +  E     + +KNK  +Q IE++T+NADQVQ  VL EIL+RNA  EYL RH L   +  ETFK  +P+I+Y+ I P+I RIANGD SP
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        IL S PISEFLT
Subjt:  ILCSSPISEFLT

AT4G37390.1 Auxin-responsive GH3 family protein1.1e-1850Show/hide
Query:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT
        EK+   ++FIE++T N D VQ  VL EIL+RN++ EYL R  L      +TFK  +P+++Y+ + P+I RI+NGD SPIL S PI+EFLT
Subjt:  EKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEFLT

AT5G54510.1 Auxin-responsive GH3 family protein5.9e-2857.14Show/hide
Query:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP
        MPEAPK        E + + + EKNK  +QFIED+T NAD VQ  VL EILSRNA  EYL RHGL   +  ETFK  +P+++Y+ I P+I RIANGD S 
Subjt:  MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSP

Query:  ILCSSPISEFLT
        +LCS+PISEFLT
Subjt:  ILCSSPISEFLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAAGCCCCAAAGAGGTGTGTGAACGCCAAGGTTGAAGAAGAAGCTCAGAAGGAGGTGCTGGAGAAAAACAAGGCCACTATCCAATTCATCGAAGACATCACGGC
CAACGCCGACCAAGTCCAGTGCTGCGTCCTCGCCGAAATCCTCTCCCGCAACGCCTCCGCCGAGTACTTGACCCGCCACGGCCTCCGCCCCAACTCCTCCCCAGAGACAT
TCAAAAAAACTATCCCTATCATCTCCTACGACCACATCCACCCTGACATCACCCGCATCGCCAATGGCGACTCCTCCCCCATCCTCTGCTCCTCCCCCATCTCCGAGTTC
TTAACCAGACACCCCATTAATTCAAGAACCACAGATAATATTATGGTATGGCATCTTCTTCCTTCTCCTTCTTCAGACAAAGACCAGAAGAGAGAGAGACATGAAGAAGA
TAAGGTAAGGACTGAGACAGCAGAGGCTGAGAGGTTGCTTTTTTTGAGGTTTCTGTGTTATGTTATTACTGTTGCAAGTGACAGCAACTGTTTCATCTGCATGCCTTTGG
TCTGGTCTCTTCCAGTTCTGCATGCACTGTCTCTTCATTTCCATGATTTTGCCCTTTCTTTCTTACCTTCTTCTCTTTTCTCTAATCTCTCTTCTTCAAAGCTCATTGAA
ACTAAAGACGGGTCCGTGAACTTTAGCGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAAGCCCCAAAGAGGTGTGTGAACGCCAAGGTTGAAGAAGAAGCTCAGAAGGAGGTGCTGGAGAAAAACAAGGCCACTATCCAATTCATCGAAGACATCACGGC
CAACGCCGACCAAGTCCAGTGCTGCGTCCTCGCCGAAATCCTCTCCCGCAACGCCTCCGCCGAGTACTTGACCCGCCACGGCCTCCGCCCCAACTCCTCCCCAGAGACAT
TCAAAAAAACTATCCCTATCATCTCCTACGACCACATCCACCCTGACATCACCCGCATCGCCAATGGCGACTCCTCCCCCATCCTCTGCTCCTCCCCCATCTCCGAGTTC
TTAACCAGACACCCCATTAATTCAAGAACCACAGATAATATTATGGTATGGCATCTTCTTCCTTCTCCTTCTTCAGACAAAGACCAGAAGAGAGAGAGACATGAAGAAGA
TAAGGTAAGGACTGAGACAGCAGAGGCTGAGAGGTTGCTTTTTTTGAGGTTTCTGTGTTATGTTATTACTGTTGCAAGTGACAGCAACTGTTTCATCTGCATGCCTTTGG
TCTGGTCTCTTCCAGTTCTGCATGCACTGTCTCTTCATTTCCATGATTTTGCCCTTTCTTTCTTACCTTCTTCTCTTTTCTCTAATCTCTCTTCTTCAAAGCTCATTGAA
ACTAAAGACGGGTCCGTGAACTTTAGCGTATAA
Protein sequenceShow/hide protein sequence
MPEAPKRCVNAKVEEEAQKEVLEKNKATIQFIEDITANADQVQCCVLAEILSRNASAEYLTRHGLRPNSSPETFKKTIPIISYDHIHPDITRIANGDSSPILCSSPISEF
LTRHPINSRTTDNIMVWHLLPSPSSDKDQKRERHEEDKVRTETAEAERLLFLRFLCYVITVASDSNCFICMPLVWSLPVLHALSLHFHDFALSFLPSSLFSNLSSSKLIE
TKDGSVNFSV