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MS024126 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024126
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c biogenesis FN
Genome locationscaffold236:376005..376640
RNA-Seq ExpressionMS024126
SyntenyMS024126
Gene Ontology termsGO:0015886 - heme transport (biological process)
GO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015232 - heme transporter activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDY45536.1 BnaCnng12950D [Brassica napus]8.8e-0647.67Show/hide
Query:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        Y+     +A  R P    GK   G PL       +V P  + G        L DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
QJS07740.1 cytochrome c biogenesis FN [Cleome violacea]5.1e-0683.33Show/hide
Query:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        GL DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
VDD65135.1 unnamed protein product [Brassica oleracea]8.8e-0647.67Show/hide
Query:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        Y+     +A  R P    GK   G PL       +V P  + G        L DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
YP_003587247.1 cytochrome c biogenesis FN [Citrullus lanatus]7.9e-0786.11Show/hide
Query:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        GL DTGREQAKRVV NGKKETTTSLLCWTAGA + V
Subjt:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
YP_009913607.1 cytochrome c biogenesis FN [Luffa acutangula]7.9e-0786.11Show/hide
Query:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        GL DTGREQAKRVV NGKKETTTSLLCWTAGA + V
Subjt:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
TrEMBL top hitse value%identityAlignment
A0A078I6P9 BnaCnng12950D protein4.3e-0647.67Show/hide
Query:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        Y+     +A  R P    GK   G PL       +V P  + G        L DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
A0A3P6H9J6 Cytochrom_C_asm domain-containing protein4.3e-0647.67Show/hide
Query:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        Y+     +A  R P    GK   G PL       +V P  + G        L DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  YQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGGGXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
A0A6M4PBZ4 Cytochrome c biogenesis FN2.5e-0683.33Show/hide
Query:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        GL DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
A0A7D6BZF6 Cytochrome c biogenesis FN3.8e-0786.11Show/hide
Query:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        GL DTGREQAKRVV NGKKETTTSLLCWTAGA + V
Subjt:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
D5I3B7 Cytochrome c biogenesis FN3.8e-0786.11Show/hide
Query:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        GL DTGREQAKRVV NGKKETTTSLLCWTAGA + V
Subjt:  GLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
SwissProt top hitse value%identityAlignment
Q04647 Probable cytochrome c biosynthesis protein5.7e-0880Show/hide
Query:  LADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        L DTGREQAKRVV NGKK+TTTS LCWTAGA + V
Subjt:  LADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
Q04648 Probable cytochrome c biosynthesis protein3.1e-0674.29Show/hide
Query:  LADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        L DTGREQAKRVV NGKK+T TS L WTAGA + V
Subjt:  LADTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
Q33884 Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment)4.8e-0781.82Show/hide
Query:  DTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        DTGREQAKRVV NGKKETTT  LCWTAGA + V
Subjt:  DTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
Arabidopsis top hitse value%identityAlignment
ATMG00960.1 Cytochrome C assembly protein6.9e-0984.85Show/hide
Query:  DTGREQAKRVVPNGKKETTTSLLCWTAGALSFV
        DTGREQAKRVV NGKKETTTS LCWTAGA + V
Subjt:  DTGREQAKRVVPNGKKETTTSLLCWTAGALSFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCGACCCGTCAACAAAGAGTGATGCATGTAGCTATAGAAGAGAGCAACAAGATATGAAAGAGGATCCCTGCTCACTCGCCCTACTTGTAAGTCTCTATAGAAA
ATGTGGGAGAGGGTTTCACTATCTCTGGGAGAAGGTCAAACTCTGGGTGGGCTGCCAGGTTTCGCCTACGCTACGCTACCAAGCCCCCCTTCAAACCCTTGCCAGAAGGA
GGTGCCCCTCTAAGATTCCCGGTAAACTCGGGCTCGGGGGGCCTTTGCCTTCATTTCTTGAAAAGCACAAGGTCACCCCGCACCGAGTTTTCGGGGGGGGGGGGGGGGGG
GGGGNAGGGCTAGCAGACACGGGGAGGGAGCAGGCAAAGCGTGTCGTTCCTAATGGAAAGAAAGAGACCACTACTTCACTTCTTTGTTGGACCGCCGGCGCACTCTCCTT
CGTTCTCTCACGCGCCCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCGACCCGTCAACAAAGAGTGATGCATGTAGCTATAGAAGAGAGCAACAAGATATGAAAGAGGATCCCTGCTCACTCGCCCTACTTGTAAGTCTCTATAGAAA
ATGTGGGAGAGGGTTTCACTATCTCTGGGAGAAGGTCAAACTCTGGGTGGGCTGCCAGGTTTCGCCTACGCTACGCTACCAAGCCCCCCTTCAAACCCTTGCCAGAAGGA
GGTGCCCCTCTAAGATTCCCGGTAAACTCGGGCTCGGGGGGCCTTTGCCTTCATTTCTTGAAAAGCACAAGGTCACCCCGCACCGAGTTTTCGGGGGGGGGGGGGGGGGG
GGGGNAGGGCTAGCAGACACGGGGAGGGAGCAGGCAAAGCGTGTCGTTCCTAATGGAAAGAAAGAGACCACTACTTCACTTCTTTGTTGGACCGCCGGCGCACTCTCCTT
CGTTCTCTCACGCGCCCGATAA
Protein sequenceShow/hide protein sequence
MACDPSTKSDACSYRREQQDMKEDPCSLALLVSLYRKCGRGFHYLWEKVKLWVGCQVSPTLRYQAPLQTLARRRCPSKIPGKLGLGGPLPSFLEKHKVTPHRVFGGGGGG
GXGLADTGREQAKRVVPNGKKETTTSLLCWTAGALSFVLSRAR