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MS024146 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024146
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRagB/susD domain protein
Genome locationscaffold36:272551..273120
RNA-Seq ExpressionMS024146
SyntenyMS024146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB54451.1 hypothetical protein L484_019010 [Morus notabilis]4.9e-0664.41Show/hide
Query:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRAS
        EE +E EEGGGE+FL+ +FGGER ALI   N +GG+AA SY SMR  RSSS+V+ET+AS
Subjt:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRAS

GAY36256.1 hypothetical protein CUMW_020950, partial [Citrus unshiu]1.5e-0762.12Show/hide
Query:  EEEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGN
        ++++EE EE G E+FL    G ER ALI K  ++GG+A RSYSSMR ARSSSEV+ET+ASRSS+GN
Subjt:  EEEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGN

GER51554.1 ragB/susD domain protein [Striga asiatica]1.4e-0550Show/hide
Query:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS
        EEE+E E+GG       +F  ERNALI      GG  AR YSS+R ARSSS+V +T ASRSS+GNW   L  T+ PH   +   SS
Subjt:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS

KAG5524875.1 hypothetical protein RHGRI_031521 [Rhododendron griersonianum]1.4e-0538.75Show/hide
Query:  MEEEEEEREE--GGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSSVPYHVLQLLQ
        M  +E+ R E   GGE+FL  +F G   A+I +      E  R YSS+RL  SSSEV+ TR SRSS+GN   K+ +   PHS  NL  SS          
Subjt:  MEEEEEEREE--GGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSSVPYHVLQLLQ

Query:  LEYRIQSTEHRTRIQRNEAVTSKGNGAANGKKAGFATVVAEFAVGIAREDLAAVAAEELE
                      +     T + +G  NG+ +G A  VAE AVG  RED A VA EEL+
Subjt:  LEYRIQSTEHRTRIQRNEAVTSKGNGAANGKKAGFATVVAEFAVGIAREDLAAVAAEELE

RWV81689.1 hypothetical protein GW17_00056862 [Ensete ventricosum]7.8e-0447.06Show/hide
Query:  EEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS
        EEEE ++GG        F GE  + +          A SYSS RLARSSSEV ETRASRSS+G+W R+LT    PH+  +   SS
Subjt:  EEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS

TrEMBL top hitse value%identityAlignment
A0A2H5N7S5 Uncharacterized protein (Fragment)7.3e-0862.12Show/hide
Query:  EEEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGN
        ++++EE EE G E+FL    G ER ALI K  ++GG+A RSYSSMR ARSSSEV+ET+ASRSS+GN
Subjt:  EEEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGN

A0A444C740 Uncharacterized protein3.8e-0447.06Show/hide
Query:  EEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS
        EEEE ++GG        F GE  + +          A SYSS RLARSSSEV ETRASRSS+G+W R+LT    PH+  +   SS
Subjt:  EEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS

A0A5A7R5D1 RagB/susD domain protein6.9e-0650Show/hide
Query:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS
        EEE+E E+GG       +F  ERNALI      GG  AR YSS+R ARSSS+V +T ASRSS+GNW   L  T+ PH   +   SS
Subjt:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSS

W9QU37 Uncharacterized protein2.4e-0664.41Show/hide
Query:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRAS
        EE +E EEGGGE+FL+ +FGGER ALI   N +GG+AA SY SMR  RSSS+V+ET+AS
Subjt:  EEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGAGGAGGAGGAGAGGGAGGAAGGAGGAGGGGAGATGTTTTTGGTATATAATTTTGGAGGTGAAAGGAATGCTCTGATCTTGAAATTGAATGACGAGGGTGG
AGAAGCGGCTCGATCGTACTCTTCGATGAGATTGGCGAGATCTTCGTCGGAGGTGATGGAAACTAGGGCATCCAGGTCTTCTCTTGGCAATTGGCAACGGAAGCTCACAC
AAACGGATGTTCCGCACAGCTGCCCGAACTTGAACAACAGCTCTGTACCGTACCATGTATTACAGTTATTGCAATTAGAATACAGAATACAGAGTACAGAACACAGAACA
CGAATACAGAGAAATGAAGCGGTTACCAGTAAAGGAAATGGAGCGGCTAACGGCAAGAAGGCGGGTTTCGCCACCGTGGTAGCGGAGTTTGCCGTCGGGATAGCGAGGGA
GGATCTTGCCGCCGTAGCTGCAGAGGAACTTGAGGGTGAGAGCGTTGCGGTGGAGGGGAGGTCTGCCCATGTATCAGCTATTGGAATTGGATATTGGATATTGGATATTG
GATATTGGATTACCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGAGGAGGAGGAGAGGGAGGAAGGAGGAGGGGAGATGTTTTTGGTATATAATTTTGGAGGTGAAAGGAATGCTCTGATCTTGAAATTGAATGACGAGGGTGG
AGAAGCGGCTCGATCGTACTCTTCGATGAGATTGGCGAGATCTTCGTCGGAGGTGATGGAAACTAGGGCATCCAGGTCTTCTCTTGGCAATTGGCAACGGAAGCTCACAC
AAACGGATGTTCCGCACAGCTGCCCGAACTTGAACAACAGCTCTGTACCGTACCATGTATTACAGTTATTGCAATTAGAATACAGAATACAGAGTACAGAACACAGAACA
CGAATACAGAGAAATGAAGCGGTTACCAGTAAAGGAAATGGAGCGGCTAACGGCAAGAAGGCGGGTTTCGCCACCGTGGTAGCGGAGTTTGCCGTCGGGATAGCGAGGGA
GGATCTTGCCGCCGTAGCTGCAGAGGAACTTGAGGGTGAGAGCGTTGCGGTGGAGGGGAGGTCTGCCCATGTATCAGCTATTGGAATTGGATATTGGATATTGGATATTG
GATATTGGATTACCAAATGA
Protein sequenceShow/hide protein sequence
MEEEEEEREEGGGEMFLVYNFGGERNALILKLNDEGGEAARSYSSMRLARSSSEVMETRASRSSLGNWQRKLTQTDVPHSCPNLNNSSVPYHVLQLLQLEYRIQSTEHRT
RIQRNEAVTSKGNGAANGKKAGFATVVAEFAVGIAREDLAAVAAEELEGESVAVEGRSAHVSAIGIGYWILDIGYWITK