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MS024256 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024256
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAPO protein 3, mitochondrial
Genome locationscaffold30:102814..104907
RNA-Seq ExpressionMS024256
SyntenyMS024256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587392.1 APO protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3454.78Show/hide
Query:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        SRCSF W   N +D+Q+EE  +LRKLSI TL+SW+EMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             KGPPLDNKLKRFYGK+ AVVE C+QA API +Q+RSM+RLDVV PH D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

XP_022137877.1 APO protein 3, mitochondrial [Momordica charantia]6.4e-3557.62Show/hide
Query:  SFLWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------K
        SF WNI D+ NEEEA+LRKLSIKTLD WLEMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                      +
Subjt:  SFLWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------K

Query:  GPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
        GPPLDNKLKRFYG++ AVVE CVQA API +Q+RSMMRLDVV P  D++ L
Subjt:  GPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

XP_022928867.1 APO protein 3, mitochondrial-like [Cucurbita moschata]2.4e-3454.78Show/hide
Query:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        SRCSF W   N +D+Q+EE  +LRKLSI TL+SW+EMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             KGPPLDNKLKRFYGK+ AVVE C+QA API +Q+RSM+RLDVV PH D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

XP_023531656.1 APO protein 3, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]2.4e-3454.78Show/hide
Query:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        SRCSF W   N +D+Q+EE  +LRKLSI TL+SW+EMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             KGPPLDNKLKRFYGK+ AVVE C+QA API +Q+RSM+RLDVV PH D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

XP_023531657.1 APO protein 3, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]2.4e-3454.78Show/hide
Query:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        SRCSF W   N +D+Q+EE  +LRKLSI TL+SW+EMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             KGPPLDNKLKRFYGK+ AVVE C+QA API +Q+RSM+RLDVV PH D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

TrEMBL top hitse value%identityAlignment
A0A0A0KML8 Uncharacterized protein1.1e-2952.38Show/hide
Query:  NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPL
        N +D+Q E + ++R+LSI+TLDSWLEMVSGAK  M KY VQTCGYCPEVQVGP  HK                                      K PPL
Subjt:  NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPL

Query:  DNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
        DNKLKR+YGK+ AVVE CVQA API +Q+RSMMRLDVV P  D++ L
Subjt:  DNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

A0A1S3BNU7 APO protein 3, mitochondrial isoform X11.5e-2950.96Show/hide
Query:  SRCSF---LWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        S+ SF   L N +D+Q E + ++R+LSI+TLDSWLEMVSGAK  M KY VQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSF---LWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             + PPLDNKLKR+YGK+ AVVE CVQA API +Q+RSMMRLDVV P  D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

A0A6J1CBK2 APO protein 3, mitochondrial3.1e-3557.62Show/hide
Query:  SFLWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------K
        SF WNI D+ NEEEA+LRKLSIKTLD WLEMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                      +
Subjt:  SFLWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------K

Query:  GPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
        GPPLDNKLKRFYG++ AVVE CVQA API +Q+RSMMRLDVV P  D++ L
Subjt:  GPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

A0A6J1EL54 APO protein 3, mitochondrial-like1.2e-3454.78Show/hide
Query:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        SRCSF W   N +D+Q+EE  +LRKLSI TL+SW+EMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             KGPPLDNKLKRFYGK+ AVVE C+QA API +Q+RSM+RLDVV PH D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

A0A6J1IFT0 APO protein 3, mitochondrial1.3e-3354.14Show/hide
Query:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------
        SRCSF W   N +D+Q+EE  +L KLSI TL+SW+EMVSGAK  M KYRVQTCGYCPEVQVGP  HK                                 
Subjt:  SRCSFLW---NIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------

Query:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
             KGPPLDNKLKRFYGK+ AVVE C+QA API  Q+RSM+RLDVV PH D++ L
Subjt:  -----KGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

SwissProt top hitse value%identityAlignment
Q8W4A5 APO protein 2, chloroplastic5.0e-1435.88Show/hide
Query:  EAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYG
        E +   L+ +TL +W EM +GAK  M  YRV+ CGYCPEV VGP  HK                                       GPP+  +L+ FYG
Subjt:  EAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYG

Query:  KISAVVEPCVQATAPISNQHRSMMRLDVVLP
        +  AVVE C QA A +   +R+ MRL+V +P
Subjt:  KISAVVEPCVQATAPISNQHRSMMRLDVVLP

Q9FH50 APO protein 3, mitochondrial3.1e-2442.76Show/hide
Query:  DRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------------KGPPLDN
        DR  EE+  L++LS +T++SW EMV G +  M +YRV TCGYCPE+QVGP  HK                                        G  LDN
Subjt:  DRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------------KGPPLDN

Query:  KLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
         LKRFYGK  AV+E CVQ  AP+ +Q+ SMMRLDVV P  D++ L
Subjt:  KLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

Q9XIR4 APO protein 1, chloroplastic3.3e-1030.16Show/hide
Query:  KLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYGKISAV
        K++ +T+D++ ++  G    M K+ V+ CGYC EV VGP  H                                       KG PL   L+RFYGK  A+
Subjt:  KLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYGKISAV

Query:  VEPCVQATAPISNQHRSMMRLDVVLP
        VE C+ + A +  ++++MMRLD+++P
Subjt:  VEPCVQATAPISNQHRSMMRLDVVLP

Arabidopsis top hitse value%identityAlignment
AT1G64810.1 Arabidopsis thaliana protein of unknown function (DUF794)2.4e-1130.16Show/hide
Query:  KLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYGKISAV
        K++ +T+D++ ++  G    M K+ V+ CGYC EV VGP  H                                       KG PL   L+RFYGK  A+
Subjt:  KLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYGKISAV

Query:  VEPCVQATAPISNQHRSMMRLDVVLP
        VE C+ + A +  ++++MMRLD+++P
Subjt:  VEPCVQATAPISNQHRSMMRLDVVLP

AT5G57930.1 Arabidopsis thaliana protein of unknown function (DUF794)3.5e-1535.88Show/hide
Query:  EAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYG
        E +   L+ +TL +W EM +GAK  M  YRV+ CGYCPEV VGP  HK                                       GPP+  +L+ FYG
Subjt:  EAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYG

Query:  KISAVVEPCVQATAPISNQHRSMMRLDVVLP
        +  AVVE C QA A +   +R+ MRL+V +P
Subjt:  KISAVVEPCVQATAPISNQHRSMMRLDVVLP

AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794)3.5e-1535.88Show/hide
Query:  EAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYG
        E +   L+ +TL +W EM +GAK  M  YRV+ CGYCPEV VGP  HK                                       GPP+  +L+ FYG
Subjt:  EAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK--------------------------------------KGPPLDNKLKRFYG

Query:  KISAVVEPCVQATAPISNQHRSMMRLDVVLP
        +  AVVE C QA A +   +R+ MRL+V +P
Subjt:  KISAVVEPCVQATAPISNQHRSMMRLDVVLP

AT5G61930.1 Arabidopsis thaliana protein of unknown function (DUF794)2.2e-2542.76Show/hide
Query:  DRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------------KGPPLDN
        DR  EE+  L++LS +T++SW EMV G +  M +YRV TCGYCPE+QVGP  HK                                        G  LDN
Subjt:  DRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------------KGPPLDN

Query:  KLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
         LKRFYGK  AV+E CVQ  AP+ +Q+ SMMRLDVV P  D++ L
Subjt:  KLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL

AT5G61930.2 Arabidopsis thaliana protein of unknown function (DUF794)2.2e-2542.76Show/hide
Query:  DRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------------KGPPLDN
        DR  EE+  L++LS +T++SW EMV G +  M +YRV TCGYCPE+QVGP  HK                                        G  LDN
Subjt:  DRQNEEEAKLRKLSIKTLDSWLEMVSGAK--MGKYRVQTCGYCPEVQVGPGRHK---------------------------------------KGPPLDN

Query:  KLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL
         LKRFYGK  AV+E CVQ  AP+ +Q+ SMMRLDVV P  D++ L
Subjt:  KLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHHDDIAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGGTGTTCATTCTTATGGAATATTATGGATCGGCAGAATGAAGAAGAGGCTAAGTTGAGAAAATTGAGCATCAAAACACTGGACTCGTGGCTTGAAATGGTGTC
CGGAGCAAAGATGGGAAAGTACAGGGTGCAAACATGTGGATACTGTCCCGAGGTTCAGGTTGGTCCAGGAAGGCATAAGAAAGGGCCTCCTCTAGATAACAAGTTGAAGA
GATTTTACGGCAAAATTTCGGCGGTGGTTGAACCGTGCGTGCAAGCAACTGCACCTATTTCAAATCAGCATAGGAGCATGATGAGGCTCGATGTTGTTCTTCCACACCAT
GATGACATTGCTCTTAATTCCTCAAATGGAGAATCTGTTGAGCGTCTCACACTCAGAGAGATGTTGAATCACCATAATATGGAGATCAGAGTTCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGGTGTTCATTCTTATGGAATATTATGGATCGGCAGAATGAAGAAGAGGCTAAGTTGAGAAAATTGAGCATCAAAACACTGGACTCGTGGCTTGAAATGGTGTC
CGGAGCAAAGATGGGAAAGTACAGGGTGCAAACATGTGGATACTGTCCCGAGGTTCAGGTTGGTCCAGGAAGGCATAAGAAAGGGCCTCCTCTAGATAACAAGTTGAAGA
GATTTTACGGCAAAATTTCGGCGGTGGTTGAACCGTGCGTGCAAGCAACTGCACCTATTTCAAATCAGCATAGGAGCATGATGAGGCTCGATGTTGTTCTTCCACACCAT
GATGACATTGCTCTTAATTCCTCAAATGGAGAATCTGTTGAGCGTCTCACACTCAGAGAGATGTTGAATCACCATAATATGGAGATCAGAGTTCGATAG
Protein sequenceShow/hide protein sequence
MSRCSFLWNIMDRQNEEEAKLRKLSIKTLDSWLEMVSGAKMGKYRVQTCGYCPEVQVGPGRHKKGPPLDNKLKRFYGKISAVVEPCVQATAPISNQHRSMMRLDVVLPHH
DDIALNSSNGESVERLTLREMLNHHNMEIRVR