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MS024303 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024303
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnon-specific lipid-transfer protein 2
Genome locationscaffold30:2623240..2623524
RNA-Seq ExpressionMS024303
SyntenyMS024303
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4991971.1 hypothetical protein JHK87_025428 [Glycine soja]2.8e-2673.49Show/hide
Query:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        LV V++   V+V  AVTCSP+Q+S CV AI SS+PPS LCCSKIKEQKPCLC YLKNP+L+ FVDSPNARRVAS CGTPFP C
Subjt:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

KAG6587662.1 L-Ala-D/L-amino acid epimerase, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2885.51Show/hide
Query:  AVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        AVTC+PMQMSPC+ AIISS+PPS LCC+KIKEQKPCLC YLKNPSLR+FVDSPNAR+VA+DCGTPFPTC
Subjt:  AVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

XP_022135324.1 non-specific lipid-transfer protein 2 [Momordica charantia]1.5e-4397.87Show/hide
Query:  MKVNSWGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        MKVNSWG +AILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
Subjt:  MKVNSWGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

XP_022933706.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]3.8e-2867.74Show/hide
Query:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        SW  +  ++AV++   +  + +  AVTC+PMQMSPC+ AIISS+PPS LCC+KIKEQKPCLC YLKNPSLR+FVDSPNAR+VA+DCGTPFPTC
Subjt:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

XP_023530164.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]5.0e-2867.74Show/hide
Query:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        SW  +  ++AV++   +  + +  AVTC+PMQMSPC+ AIISS+PPS LCC+KIKEQKPCLC YLKNPSLR+FVDSPNAR+VA+DCGTPFPTC
Subjt:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

TrEMBL top hitse value%identityAlignment
A0A151RN87 Non-specific lipid-transfer protein 22.3e-2666.67Show/hide
Query:  ILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        +LVA+++  V+  G +VTCSP+++SPC+GAI SSSPPS+ CC K++EQ+PCLCGYLKNPSLR +V+SP ARRVAS CG PFPTC
Subjt:  ILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

A0A6J1C151 non-specific lipid-transfer protein 27.0e-4497.87Show/hide
Query:  MKVNSWGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        MKVNSWG +AILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
Subjt:  MKVNSWGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

A0A6J1EZT8 non-specific lipid-transfer protein 2-like1.9e-2867.74Show/hide
Query:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        SW  +  ++AV++   +  + +  AVTC+PMQMSPC+ AIISS+PPS LCC+KIKEQKPCLC YLKNPSLR+FVDSPNAR+VA+DCGTPFPTC
Subjt:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

A0A6J1KNL1 non-specific lipid-transfer protein 21.9e-2867.74Show/hide
Query:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        SW  +  ++AV++   +  + +  AVTC+PMQMSPC+ AIISS+PPS LCC+KIKEQKPCLC YLKNPSLR+FVDSPNAR+VA+DCGTPFPTC
Subjt:  SWGRVAILVAVVV---AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

C6SZF0 AAI domain-containing protein2.3e-2673.49Show/hide
Query:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        LV V +   V+V  AVTCSP+Q+S CV AI SS+PPS LCCSKIKEQKPCLC YLKNP+L+ FVDSPNARRVAS CGTPFP C
Subjt:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 24.0e-1240.86Show/hide
Query:  RVAILVAVVV------AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        R+A+LV  V        GVV V  A +C+  Q++ C GAI   + P+A CCS ++ Q+ C C + K+P    +V+SPNAR+  S CG   PTC
Subjt:  RVAILVAVVV------AGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

P82353 Non-specific lipid-transfer protein 28.6e-2364.71Show/hide
Query:  VTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        VTCSP+Q+SPC+G I S +P    CC K++EQ+PCLCGYLKNPSLR +V+SPNAR++AS+CG P P C
Subjt:  VTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

P86809 Non-specific lipid-transfer protein 21.2e-1963.93Show/hide
Query:  TCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCG
        TCS +Q+SPC+ AI  ++PPSA CC+K+KEQKPCLCGYLK+P+L+++V+SP AR+ AS CG
Subjt:  TCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCG

Q10ST8 Non-specific lipid-transfer protein 28.9e-1242.17Show/hide
Query:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        +VA    GVV V  A  C+  Q++ C GAI   + P+A CCS ++ Q+ C C + K+P    +V+SPNAR+  S CG   PTC
Subjt:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

Q43681 Probable non-specific lipid-transfer protein AKCS91.5e-1951.19Show/hide
Query:  ILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        ++VA+ +  V  V  AVTC+P ++S CV AI   S PS+ CCSK+K Q+PCLC Y+KNPSL+ +V+SP A++V S+CG  +P C
Subjt:  ILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-2352.81Show/hide
Query:  WGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        W  V  L A ++   V V   VTCSPMQ++ C  A+ SSSPPS  CC+K++EQ+PCLCGY++NP+LR +V SPNAR+V++ C  P P+C
Subjt:  WGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.6e-1647.06Show/hide
Query:  VTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        VTC   Q+ PC+ AI     PS  CC+K+ EQ+ CLCG+ KNP+   ++ SPNAR+V   C   +PTC
Subjt:  VTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.1e-2050Show/hide
Query:  ILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        IL+ ++VA    V     C+P Q+SPC+  I+  S PS LCCSK+KEQ+ C+C YLKNP+ +SF++SPNA+ +A+DC  P+P C
Subjt:  ILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.5e-2662.65Show/hide
Query:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        L AV++  +     AVTCSPMQ+SPC  AI SSSPPSALCC+K+KEQ+PCLCGY++NPSLR FV +PNAR+V+  C  P P C
Subjt:  LVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1548.53Show/hide
Query:  VTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC
        VTC   Q+S CV A+ + +PPS  CC K+KE + CLC Y++NP   S+V SPNAR+  + C   +PTC
Subjt:  VTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGAACTCGTGGGGACGGGTGGCGATTTTGGTGGCAGTGGTTGTTGCGGGAGTGGTGGAGGTGGGATGGGCGGTGACATGCAGCCCAATGCAAATGAGCCCGTG
CGTGGGCGCCATAATATCATCGAGCCCGCCGTCGGCGCTGTGCTGCAGCAAGATCAAGGAGCAGAAGCCGTGCCTGTGCGGCTACCTCAAAAACCCTTCGCTTAGGAGCT
TCGTGGACTCTCCCAATGCCAGGAGAGTCGCCTCTGACTGTGGAACTCCATTCCCCACTTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGAACTCGTGGGGACGGGTGGCGATTTTGGTGGCAGTGGTTGTTGCGGGAGTGGTGGAGGTGGGATGGGCGGTGACATGCAGCCCAATGCAAATGAGCCCGTG
CGTGGGCGCCATAATATCATCGAGCCCGCCGTCGGCGCTGTGCTGCAGCAAGATCAAGGAGCAGAAGCCGTGCCTGTGCGGCTACCTCAAAAACCCTTCGCTTAGGAGCT
TCGTGGACTCTCCCAATGCCAGGAGAGTCGCCTCTGACTGTGGAACTCCATTCCCCACTTGCTAG
Protein sequenceShow/hide protein sequence
MKVNSWGRVAILVAVVVAGVVEVGWAVTCSPMQMSPCVGAIISSSPPSALCCSKIKEQKPCLCGYLKNPSLRSFVDSPNARRVASDCGTPFPTC