CuGenDBv2

Gene ID	MS024307
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Microbial collagenase
Genome location	scaffold30:2711664..2713033
RNA-Seq Expression	MS024307
Synteny	MS024307
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587672.1 hypothetical protein SDJN03_16237, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-111

81.47

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Query:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR
        + +S FSWFASSSS      PKIF KTPSNA   YPIS KSSN+PS  R  R KT A L  KDPNGAAPL V EE+SSS I++EEVE SVK+LK AAKTR
Subjt:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR

Query:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ
        RVAAEE+LSALS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGV+LGP+GSLTFEGR+SWKNRILAFIFE+
Subjt:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ

Query:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        IRIK GPL PLEI+LGKK+EREPSSKDPFFIWFYVDEE+AVARGRSGGTAFWCRCRRVN
Subjt:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

XP_022135523.1 uncharacterized protein LOC111007458 [Momordica charantia]

1.4e-136

99.21

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Query:  MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEE
        MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIM+EEVE SVKLLKSAAKTRRVAAEE
Subjt:  MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEE

Query:  ILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVG
        ILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVG
Subjt:  ILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVG

Query:  PLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN
        PLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN
Subjt:  PLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN

XP_022929153.1 uncharacterized protein LOC111435818 [Cucurbita moschata]

3.4e-111

81.47

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Query:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR
        + +S FSWFASSSS      PKIF KTPSNA   YPIS KSSN+PS  R  R KT A L  KDPNGAAPL V EE+SSS I++EEVE SVK+LK AAKTR
Subjt:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR

Query:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ
        RVAAEE+LSALS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGV+LGP+GSLTFEGR+SWKNRILAFIFE+
Subjt:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ

Query:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        IRIK GPL PLEI+LGKK+EREPSSKDPFFIWFYVDEE+AVARGRSGGTAFWCRCRRVN
Subjt:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

XP_023005200.1 uncharacterized protein LOC111498299 [Cucurbita maxima]

1.3e-110

81.08

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Query:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR
        + +S FSWFASSSS      PKIF KTPSNA   YPIS KSSN+PS  R  R K  A L  KDPNGAAPL V EE+SSS I++EEVE SVK+LK AAKTR
Subjt:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR

Query:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ
        RVAAEE+LSALS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGV+LGP+GSLTFEGR+SWKNRILAFIFE+
Subjt:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ

Query:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        IRIK GPL PLEI+LGKK+EREPSSKDPFFIWFYVDEE+AVARGRSGGTAFWCRCRRVN
Subjt:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

XP_023529441.1 uncharacterized protein LOC111792300 [Cucurbita pepo subsp. pepo]

2.4e-109

80.31

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Query:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR
        + +S FSW ASSSS      PKIF KTPSNA   YPIS KSSN+PS  R  R K  A L  KDPNGAAPL V EE+SSS I++EEVE SVK+LK AAKTR
Subjt:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR

Query:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ
        RVAAEE+L+ALS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGV+LGP+GSLTFEGR+SWKNRILAFIFE+
Subjt:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ

Query:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        IRIK GPL PLEI+LGKK+EREPSSKDPFFIWFYVDEE+AVARGRSGGTAFWCRCRRVN
Subjt:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BXG3 uncharacterized protein LOC103494159

3.0e-105

76.6

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Query:  MAASTFS-----WFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENS-SSLIMNEEVETSVKLLK
        +AAS+FS      FASSSS      PK+F K P NA     ISFKSSN+PS+ R   +KT A LDGKDPNGA P+LV+EE+S SS I+NEEVE SVK+LK
Subjt:  MAASTFS-----WFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENS-SSLIMNEEVETSVKLLK

Query:  SAAKTRRVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRIL
        +AAKTR+V AEE+LSALS++EKAKLDPS FF+TLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRIENGV+LGP+GSLTFEGRLSWK RIL
Subjt:  SAAKTRRVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRIL

Query:  AFIFEQIRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        AFIFE++RIK+GPL+PLEI+LG+KEEREPS+KDP FIWFYVDEEIAVARGRSGGTAFWCRCRRVN
Subjt:  AFIFEQIRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

A0A5A7USJ0 Uncharacterized protein

3.0e-105

76.6

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Query:  MAASTFS-----WFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENS-SSLIMNEEVETSVKLLK
        +AAS+FS      FASSSS      PK+F K P NA     ISFKSSN+PS+ R   +KT A LDGKDPNGA P+LV+EE+S SS I+NEEVE SVK+LK
Subjt:  MAASTFS-----WFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENS-SSLIMNEEVETSVKLLK

Query:  SAAKTRRVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRIL
        +AAKTR+V AEE+LSALS++EKAKLDPS FF+TLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRIENGV+LGP+GSLTFEGRLSWK RIL
Subjt:  SAAKTRRVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRIL

Query:  AFIFEQIRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        AFIFE++RIK+GPL+PLEI+LG+KEEREPS+KDP FIWFYVDEEIAVARGRSGGTAFWCRCRRVN
Subjt:  AFIFEQIRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

A0A6J1C517 uncharacterized protein LOC111007458

6.6e-137

99.21

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Query:  MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEE
        MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIM+EEVE SVKLLKSAAKTRRVAAEE
Subjt:  MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEE

Query:  ILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVG
        ILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVG
Subjt:  ILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVG

Query:  PLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN
        PLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN
Subjt:  PLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN

A0A6J1ERA0 uncharacterized protein LOC111435818

1.6e-111

81.47

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Query:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR
        + +S FSWFASSSS      PKIF KTPSNA   YPIS KSSN+PS  R  R KT A L  KDPNGAAPL V EE+SSS I++EEVE SVK+LK AAKTR
Subjt:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR

Query:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ
        RVAAEE+LSALS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGV+LGP+GSLTFEGR+SWKNRILAFIFE+
Subjt:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ

Query:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        IRIK GPL PLEI+LGKK+EREPSSKDPFFIWFYVDEE+AVARGRSGGTAFWCRCRRVN
Subjt:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

A0A6J1KWT0 uncharacterized protein LOC111498299

6.2e-111

81.08

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Query:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR
        + +S FSWFASSSS      PKIF KTPSNA   YPIS KSSN+PS  R  R K  A L  KDPNGAAPL V EE+SSS I++EEVE SVK+LK AAKTR
Subjt:  MAASTFSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTR

Query:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ
        RVAAEE+LSALS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGV+LGP+GSLTFEGR+SWKNRILAFIFE+
Subjt:  RVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQ

Query:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN
        IRIK GPL PLEI+LGKK+EREPSSKDPFFIWFYVDEE+AVARGRSGGTAFWCRCRRVN
Subjt:  IRIKVGPLSPLEINLGKKEEREPSSKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G18060.1 unknown protein

7.8e-82

68.75

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Query:  ISFKSSNQPSLSRLLRVKTL-AALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPG
        +S  SS+    SR  R+  + A +DG+  N   P   ++      I N++V  SV +LK+AAKTR+VAA+EIL+A S IEKAK+DPS F +TLGG  SPG
Subjt:  ISFKSSNQPSLSRLLRVKTL-AALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEEILSALSIIEKAKLDPSRFFDTLGGTSSPG

Query:  RTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVGPLSPLEINLGKKEE-REPSSKDPFFIWFY
        RTWMLIFTAEKKL KGRYFPLTA+QRFDAAGKRIENGVYLGP G+LTFEGR SWKNRILAF+FEQIRIK+GPL PLE +LGKK+   EPS+KDPFFIWFY
Subjt:  RTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVGPLSPLEINLGKKEE-REPSSKDPFFIWFY

Query:  VDEEIAVARGRSGGTAFWCRCRRV
        +DEEIAVARGRSGGTAFWCRCRR+
Subjt:  VDEEIAVARGRSGGTAFWCRCRRV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGCTTCCACCTTCAGCTGGTTCGCTTCGAGTTCATCACCAAAAATCTTCCCTAAAACCCCTTCTAATGCCAACCCGTCATACCCCATTTCATTCAAATCCTCGAA
TCAGCCTTCACTTTCAAGATTGCTGAGAGTGAAAACATTGGCAGCTTTGGATGGAAAAGACCCAAATGGAGCAGCCCCTCTTCTGGTAGAGGAAGAGAATTCCAGCAGTC
TTATTATGAATGAGGAAGTGGAAACGAGTGTCAAATTGCTAAAAAGTGCGGCAAAGACAAGACGGGTAGCAGCAGAAGAAATTCTGTCAGCCCTTTCCATAATTGAGAAG
GCAAAACTTGATCCTTCAAGGTTTTTTGACACACTTGGTGGAACAAGCTCTCCCGGGAGAACCTGGATGCTTATTTTCACAGCTGAGAAAAAATTGGAAAAGGGGCGGTA
CTTTCCTCTCACAGCCATCCAGAGGTTTGATGCCGCTGGAAAAAGAATAGAGAATGGAGTGTATCTGGGGCCTGTTGGAAGCTTAACATTTGAAGGTAGACTTTCATGGA
AGAATAGAATACTGGCGTTCATTTTCGAGCAAATTCGGATAAAAGTTGGACCTTTAAGCCCTTTAGAGATAAATCTTGGTAAAAAGGAAGAAAGGGAGCCAAGCAGCAAG
GATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTCTGGTGCCGGTGTCGCCGTGTCAATAATTAG

mRNA sequence

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Protein sequence

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MAASTFSWFASSSSPKIFPKTPSNANPSYPISFKSSNQPSLSRLLRVKTLAALDGKDPNGAAPLLVEEENSSSLIMNEEVETSVKLLKSAAKTRRVAAEEILSALSIIEK
AKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVGPLSPLEINLGKKEEREPSSK
DPFFIWFYVDEEIAVARGRSGGTAFWCRCRRVNN

MS024307 (gene) of Bitter gourd (TR) v1 genome