CuGenDBv2

Gene ID	MS024311
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AT-hook motif nuclear-localized protein 16
Genome location	scaffold30:2759224..2759445
RNA-Seq Expression	MS024311
Synteny	MS024311
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0010208 - pollen wall assembly (biological process) GO:0010228 - vegetative to reproductive phase transition of meristem (biological process) GO:0010529 - negative regulation of transposition (biological process) GO:0035067 - negative regulation of histone acetylation (biological process) GO:1900111 - positive regulation of histone H3-K9 dimethylation (biological process) GO:0005634 - nucleus (cellular component) GO:0003680 - AT DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0031490 - chromatin DNA binding (molecular function)
InterPro domains	IPR014476 - AT-hook motif nuclear-localized protein 15-29

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058128.1 AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa]

5.1e-28

86.49

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  A MQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LY+WA AGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

KAE8652473.1 hypothetical protein Csa_013658 [Cucumis sativus]

2.3e-28

87.84

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  A MQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LYSWA AGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

XP_011649113.1 AT-hook motif nuclear-localized protein 16 [Cucumis sativus]

2.3e-28

87.84

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  A MQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LYSWA AGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

XP_022135397.1 AT-hook motif nuclear-localized protein 16 [Momordica charantia]

1.4e-33

100

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

XP_038880552.1 AT-hook motif nuclear-localized protein 16 [Benincasa hispida]

2.7e-29

90.54

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  AAMQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LYSWAAAGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS82 PPC domain-containing protein

1.1e-28

87.84

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  A MQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LYSWA AGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

A0A1S3BX46 AT-hook motif nuclear-localized protein 16

2.5e-28

86.49

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  A MQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LY+WA AGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

A0A5A7USJ9 AT-hook motif nuclear-localized protein 16

2.5e-28

86.49

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  A MQSQHY QNGRSHHHLDVSDLYGVPQNLITN++LPP+LY+WA AGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

A0A6J1C2K6 AT-hook motif nuclear-localized protein 16

6.7e-34

100

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

A0A6J1JFT0 AT-hook motif nuclear-localized protein 16-like

2.5e-28

86.49

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT
        MAATFMNATFDRLPSDD+E  +A+QSQHY QNGRSHHH+DVSDLYGVPQNLITN+ LPP+LYSWAAAGRTMSKT
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

SwissProt top hits

e value

%identity

Alignment

Q9SJG4 AT-hook motif nuclear-localized protein 16

4.6e-16

56.94

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSK
        MAA+FMNA FDRLP DDDEA +    Q+YQNGRS     + D++G+PQNL+TN     D+YSW  A R MSK
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSK

Arabidopsis top hits

e value

%identity

Alignment

AT2G42940.1 Predicted AT-hook DNA-binding family protein

3.3e-17

56.94

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Query:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSK
        MAA+FMNA FDRLP DDDEA +    Q+YQNGRS     + D++G+PQNL+TN     D+YSW  A R MSK
Subjt:  MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSK

Sequences

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CDS sequence

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ATGGCGGCAACGTTCATGAACGCAACATTTGACCGCCTGCCGTCGGATGACGACGAAGCCACCGCCGCCATGCAGAGCCAACACTACCAGAACGGGCGGAGCCACCACCA
CCTCGATGTTTCCGATCTGTACGGAGTGCCGCAGAACTTGATCACCAACACCACTCTTCCGCCGGACTTATACTCTTGGGCGGCGGCGGGCAGAACCATGTCGAAGACTT
AG

mRNA sequence

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Protein sequence

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MAATFMNATFDRLPSDDDEATAAMQSQHYQNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT

MS024311 (gene) of Bitter gourd (TR) v1 genome