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MS024331 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024331
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationscaffold30:3941891..3942286
RNA-Seq ExpressionMS024331
SyntenyMS024331
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EFH43606.1 expressed protein, partial [Arabidopsis lyrata subsp. lyrata]3.5e-1168.22Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS
        M   +G+ ++  LVI   V+ +ES RVARKDLG+DLGG+GI  GVG G+GLGG SGSGAGAGSGSGS S S SSSSSSS S  SGSG SAGS AGS+AGS
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS

Query:  RGGSGSG
        R GSGSG
Subjt:  RGGSGSG

KAG7540899.1 hypothetical protein ISN45_Aa07g010460 [Arabidopsis thaliana x Arabidopsis arenosa]3.5e-1168.22Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS
        M   +G+ ++  LVI   V+ +ES RVARKDLG+DLGG+GI  GVG G+GLGG SGSGAGAGSGSGS S S SSSSSSS S  SGSG SAGS AGS+AGS
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS

Query:  RGGSGSG
        R GSGSG
Subjt:  RGGSGSG

XP_004146662.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]5.4e-1267.94Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLG-GASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSR
        MG+++ + + A LV  ++V++S+S RVARKDLG+DLGGVGIGVG GVG+G G SGSGAG+GSGSGS SSS SSSSSSS S  SGSGS +GS+AGSYAGSR
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLG-GASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSR

Query:  GGSGSGGSGNGGGSGGGYGEGHGSGGGGGGG
         GSGSGG    GG G GYG G+GSG GGG G
Subjt:  GGSGSGGSGNGGGSGGGYGEGHGSGGGGGGG

XP_020872241.1 counting factor 45-1 [Arabidopsis lyrata subsp. lyrata]3.5e-1168.22Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS
        M   +G+ ++  LVI   V+ +ES RVARKDLG+DLGG+GI  GVG G+GLGG SGSGAGAGSGSGS S S SSSSSSS S  SGSG SAGS AGS+AGS
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS

Query:  RGGSGSG
        R GSGSG
Subjt:  RGGSGSG

XP_022135223.1 putative glycine-rich cell wall structural protein 1 [Momordica charantia]8.8e-3999.24Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRG
        MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRG
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRG

Query:  GSGSGGSGNGGGSGGGYGEGHGSGGGGGGGN
        GSGSGGSGNGGGSGGGYG+GHGSGGGGGGGN
Subjt:  GSGSGGSGNGGGSGGGYGEGHGSGGGGGGGN

TrEMBL top hitse value%identityAlignment
A0A1S3X249 putative glycine-rich cell wall structural protein 18.4e-1166.42Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSG---SSSSSHSSSSSSSGSGGSGSGSSAGSDAGSY
        M  ++  S + FLV   +V+ SES RVAR DLG+DLGGVG+  GVG G+GLGG SGSGAGAGSGSG   SSSSS SSSSSSS +GG G GS AGS AGSY
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSG---SSSSSHSSSSSSSGSGGSGSGSSAGSDAGSY

Query:  AGSRGGSGSGGSGNGGGS--GGGYGEGHGSGGGG
        AGSR GSGSG  G  GG   GGGYG GHG G GG
Subjt:  AGSRGGSGSGGSGNGGGS--GGGYGEGHGSGGGG

A0A6J1C481 putative glycine-rich cell wall structural protein 14.3e-3999.24Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRG
        MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRG
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRG

Query:  GSGSGGSGNGGGSGGGYGEGHGSGGGGGGGN
        GSGSGGSGNGGGSGGGYG+GHGSGGGGGGGN
Subjt:  GSGSGGSGNGGGSGGGYGEGHGSGGGGGGGN

A0A6J1E2L6 glycine-rich cell wall structural protein 2-like8.4e-1167.19Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLG-GASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSR
        MG+ + + + A LV  + V+ SES RVARKDLG+DLGGVG+G+G G+G+G G SGSG+G+GSGSGSSSSS SSSSSSS S  SGSGS +GS+AGSYAGSR
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLG-GASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSR

Query:  GGSGSGGSGNGG-GSGGGYGEGHGSGGG
         GSGSGG G GG G GGGYG G+G G G
Subjt:  GGSGSGGSGNGG-GSGGGYGEGHGSGGG

A0A6J1JMR8 glycine-rich cell wall structural protein 2-like1.7e-1167.97Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLG-GASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSR
        MG ++ + + A LV  + V+ SES RVARKDLG+DLGGVG+G+G G+G+G G SGSG+G+GSGSGSSSSS SSSSSSS S  SGSGS +GS+AGSYAGSR
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLG-GASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSR

Query:  GGSGSGGSGNGG-GSGGGYGEGHGSGGG
         GSGSGGSG GG G GGGYG G+G G G
Subjt:  GGSGSGGSGNGG-GSGGGYGEGHGSGGG

A0A7N2L1G7 Uncharacterized protein3.8e-1169.12Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGV--GLGGASGSGAGA--GSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYA
        M A + +++VA L++ + VI  ESGRVARKDLGVDLGGVG+GVG GV  GLGG SGSGAGA  GSGSGS SSS SSS SSS S GSGSGS AGS AGSYA
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGV--GLGGASGSGAGA--GSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYA

Query:  GSRGGSGSGGS-GNGGGSGGGYGEGHGSGGGGGGGN
        GSR GSGSGG+ G G GSG G G G GSG G G G+
Subjt:  GSRGGSGSGGS-GNGGGSGGGYGEGHGSGGGGGGGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein2.1e-1466.36Show/hide
Query:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS
        M    G+ ++  +VI   V+ +ES R+ARKDLG+DLGG+GI  GVG G+GLGG SGSGAGAGSGSGS S S SSSSSSS S  SGSG SAGS AGS+AGS
Subjt:  MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGI--GVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGS

Query:  RGGSGSG
        R GSGSG
Subjt:  RGGSGSG

AT4G30460.1 glycine-rich protein8.3e-1166.4Show/hide
Query:  IVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGL-GGASGSGAGAGSGS-GSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRGGSGSGG
        I+  L++   V+ SES RVARKDLG+DLGG+G G+G G+G+ GG SGSGAGAGSGS G  SSS SSSSSSS S   G G  AGS+AGSYAGS  GSGSGG
Subjt:  IVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGL-GGASGSGAGAGSGS-GSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRGGSGSGG

Query:  -SGNGGGSGGGYGEGHGSGGGGGGG
         SG+G G G G G GHG GGGGGGG
Subjt:  -SGNGGGSGGGYGEGHGSGGGGGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCAATGAGGGGCGTTAGCATTGTGGCTTTTCTAGTAATTGGCGTGTGGGTGATTGCTTCAGAAAGCGGTCGTGTGGCCAGGAAGGACTTGGGCGTCGACCTTGG
AGGGGTTGGCATCGGCGTCGGAACGGGAGTCGGCTTGGGCGGTGCCAGTGGCTCGGGAGCCGGAGCTGGCTCTGGCTCTGGATCTTCTTCCTCATCACACTCCTCCTCCT
CCTCCTCCTCAGGCTCCGGCGGGTCCGGGTCCGGGTCCAGCGCAGGGTCCGATGCTGGTTCCTACGCTGGCTCTCGGGGAGGCTCGGGGTCTGGTGGAAGTGGGAACGGC
GGTGGATCCGGGGGCGGATACGGCGAGGGTCATGGTTCTGGCGGTGGCGGCGGCGGCGGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCAATGAGGGGCGTTAGCATTGTGGCTTTTCTAGTAATTGGCGTGTGGGTGATTGCTTCAGAAAGCGGTCGTGTGGCCAGGAAGGACTTGGGCGTCGACCTTGG
AGGGGTTGGCATCGGCGTCGGAACGGGAGTCGGCTTGGGCGGTGCCAGTGGCTCGGGAGCCGGAGCTGGCTCTGGCTCTGGATCTTCTTCCTCATCACACTCCTCCTCCT
CCTCCTCCTCAGGCTCCGGCGGGTCCGGGTCCGGGTCCAGCGCAGGGTCCGATGCTGGTTCCTACGCTGGCTCTCGGGGAGGCTCGGGGTCTGGTGGAAGTGGGAACGGC
GGTGGATCCGGGGGCGGATACGGCGAGGGTCATGGTTCTGGCGGTGGCGGCGGCGGCGGAAACTAG
Protein sequenceShow/hide protein sequence
MGAMRGVSIVAFLVIGVWVIASESGRVARKDLGVDLGGVGIGVGTGVGLGGASGSGAGAGSGSGSSSSSHSSSSSSSGSGGSGSGSSAGSDAGSYAGSRGGSGSGGSGNG
GGSGGGYGEGHGSGGGGGGGN