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MS024349 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024349
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:485826..486236
RNA-Seq ExpressionMS024349
SyntenyMS024349
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143694.1 S-protein homolog 1-like [Momordica charantia]6.7e-5875.18Show/hide
Query:  MIVVALVLLGCSTSVSSL-PLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHH
        MIVVALVLL CST  SS  P   TWHVNI+NELNS + LFVHC+S+DDDLGEHN+ VGTQYSF FKDNIW TTLFWCYL+KPNN+HA FDVYW+D    +
Subjt:  MIVVALVLLGCSTSVSSL-PLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHH

Query:  WLYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        WLYTRC+WKTCIWIAK+DGIYIK+IP+NQ++L+HKWE
Subjt:  WLYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

XP_022152463.1 S-protein homolog 1-like [Momordica charantia]1.1e-5573.53Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        +IVVALVLLGCST   +   + TW V+I+NEL++G++LFVHCKS+DDDLGEHNLD G QY FTFKDN+W TTLFWCYL+KP+N+HAAFDVYW D S  HW
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRCD+K CIWIAK DGIYIKNIP NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

XP_022959591.1 S-protein homolog 1-like [Cucurbita moschata]1.5e-4158.09Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        MIV  L L+  ST       L TW V ++N L  G+ L  HCKS++DD+G+ N+  G  YSFTFKDN+W TT FWC L KPNNAHA+FDVYW DTS   W
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRC   TC+WI K+DG+YIKN   NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

XP_023005093.1 S-protein homolog 1-like [Cucurbita maxima]8.8e-4258.82Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        MIV  L L+  ST       L  W V ++N L  G+ L  HCKS++DDLG+HNL  G  +SFTFKDN+W TT FWC L KPNNAHA+FDVYW DTS   W
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRC   TC+WI K+DG+YIKN   NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

XP_023514776.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.5e-4158.09Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        MIV  L L+  ST       + TW V ++N L  G+ L  HCKS++DDLG+ N+  G  YSFTFKDN+W TT FWC L KPNNAHA+FDVYW DTS   W
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRC   TC+WI K+DG+YIKN   NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ33 S-protein homolog3.3e-5875.18Show/hide
Query:  MIVVALVLLGCSTSVSSL-PLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHH
        MIVVALVLL CST  SS  P   TWHVNI+NELNS + LFVHC+S+DDDLGEHN+ VGTQYSF FKDNIW TTLFWCYL+KPNN+HA FDVYW+D    +
Subjt:  MIVVALVLLGCSTSVSSL-PLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHH

Query:  WLYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        WLYTRC+WKTCIWIAK+DGIYIK+IP+NQ++L+HKWE
Subjt:  WLYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

A0A6J1CQW3 S-protein homolog9.5e-4256.3Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        +I+VA+VL+  ST+ +       W V+I+N L+SG+ LF+HCKS+DDDLG HNL VG ++ + F+DN+W TTLFWCY++KP+NA+A+F+VYW D S   W
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKW
        LY  C+W+ CIW AK+DGIYIKNI  N++EL HKW
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKW

A0A6J1DEX4 S-protein homolog5.2e-5673.53Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        +IVVALVLLGCST   +   + TW V+I+NEL++G++LFVHCKS+DDDLGEHNLD G QY FTFKDN+W TTLFWCYL+KP+N+HAAFDVYW D S  HW
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRCD+K CIWIAK DGIYIKNIP NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

A0A6J1H5A3 S-protein homolog7.3e-4258.09Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        MIV  L L+  ST       L TW V ++N L  G+ L  HCKS++DD+G+ N+  G  YSFTFKDN+W TT FWC L KPNNAHA+FDVYW DTS   W
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRC   TC+WI K+DG+YIKN   NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

A0A6J1L199 S-protein homolog4.3e-4258.82Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW
        MIV  L L+  ST       L  W V ++N L  G+ L  HCKS++DDLG+HNL  G  +SFTFKDN+W TT FWC L KPNNAHA+FDVYW DTS   W
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHW

Query:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE
        LYTRC   TC+WI K+DG+YIKN   NQ+ELVH WE
Subjt:  LYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 67.1e-1032.85Show/hide
Query:  MIVVALVLLGCSTSVSSLPLL-MTWHVNIINELNSGEKLF-VHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSH
        + +V + L+GC T      +  M   +  +   N  + L  VHCKSRDDD G H L  G  Y + F  N  N+TL++C   +       FD+Y     S 
Subjt:  MIVVALVLLGCSTSVSSLPLL-MTWHVNIINELNSGEKLF-VHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSH

Query:  HWLYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKW
            +RC  + C W AK DGIY       +  L +KW
Subjt:  HWLYTRCDWKTCIWIAKNDGIYIKNIPLNQEELVHKW

F4JLQ5 S-protein homolog 22.9e-1133.64Show/hide
Query:  VNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKNDGIYIKNIP
        V I N+L +   L  HCKS+DDDLG   L  G  +SF+F    +  TL++C    PN +H +FD+Y     S      +C+   C+W  + +G    N  
Subjt:  VNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKNDGIYIKNIP

Query:  LNQEELVHKW
          Q +L + W
Subjt:  LNQEELVHKW

F4JLS0 S-protein homolog 11.7e-2742.52Show/hide
Query:  GCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKT
        G +T    +P +  W V ++N L +GE LF+HCKS++DDLGE NL    ++S+ F +N+ ++T FWCY+ K +N H   +V+W D      L+ RC WK 
Subjt:  GCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKT

Query:  CIWIAKNDGIYIKNIPLNQEELVHKWE
        CIW AK DG+Y+ N    ++ L  KWE
Subjt:  CIWIAKNDGIYIKNIPLNQEELVHKWE

Q2HQ46 S-protein homolog 742.4e-2642.02Show/hide
Query:  LPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKND
        +P +  W V + N L +GE LF+HCKS+++DLG+ NL    ++S+ F +N+ ++TLFWCY+ K ++ H    V+W D      L+ RCDWK C+W AKND
Subjt:  LPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKND

Query:  GIYIKNIPLNQEELVHKWE
        G+Y+ N  + ++ L  KW+
Subjt:  GIYIKNIPLNQEELVHKWE

Q9LW22 S-protein homolog 218.4e-1139.05Show/hide
Query:  VNIINELNSGEK--LFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQK-PN-------NAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAK
        + + NELN   K  L VHCKS+++D+G   L +G   SF+FK N W TT FWC L K P+        A+ A  ++  D SS++WL            A+
Subjt:  VNIINELNSGEK--LFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQK-PN-------NAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAK

Query:  NDGIY
        +DGIY
Subjt:  NDGIY

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.0e-1233.64Show/hide
Query:  VNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKNDGIYIKNIP
        V I N+L +   L  HCKS+DDDLG   L  G  +SF+F    +  TL++C    PN +H +FD+Y     S      +C+   C+W  + +G    N  
Subjt:  VNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKNDGIYIKNIP

Query:  LNQEELVHKW
          Q +L + W
Subjt:  LNQEELVHKW

AT4G16295.1 S-protein homologue 11.2e-2842.52Show/hide
Query:  GCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKT
        G +T    +P +  W V ++N L +GE LF+HCKS++DDLGE NL    ++S+ F +N+ ++T FWCY+ K +N H   +V+W D      L+ RC WK 
Subjt:  GCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKT

Query:  CIWIAKNDGIYIKNIPLNQEELVHKWE
        CIW AK DG+Y+ N    ++ L  KWE
Subjt:  CIWIAKNDGIYIKNIPLNQEELVHKWE

AT4G29035.1 Plant self-incompatibility protein S1 family1.7e-2742.02Show/hide
Query:  LPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKND
        +P +  W V + N L +GE LF+HCKS+++DLG+ NL    ++S+ F +N+ ++TLFWCY+ K ++ H    V+W D      L+ RCDWK C+W AKND
Subjt:  LPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKND

Query:  GIYIKNIPLNQEELVHKWE
        G+Y+ N  + ++ L  KW+
Subjt:  GIYIKNIPLNQEELVHKWE

AT5G04347.1 Plant self-incompatibility protein S1 family1.4e-1334.51Show/hide
Query:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQK-PN-NAHAAFDVYWIDTSSH
        + +  ++L  C  +   +  L+     + NELN+ + L V C+S+DD+LG+H L VG      F DN+W  TLFWC L K P+   H AFD Y       
Subjt:  MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQK-PN-NAHAAFDVYWIDTSSH

Query:  HWLYTRCDWKTCI-----WIAKNDGIYIKNIPLNQEELVHKW
             R  WK  I     WIA+ DGIY    P    +  + W
Subjt:  HWLYTRCDWKTCI-----WIAKNDGIYIKNIPLNQEELVHKW

AT5G04350.1 Plant self-incompatibility protein S1 family1.2e-1542.71Show/hide
Query:  VNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYL-QKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKNDGIY
        V + N+L   + L VHC+S+DDDLGEH L +G  Y FTF DNIW TT F C + Q PN  H       +D  ++   +++    +C WI + DGIY
Subjt:  VNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYL-QKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTCIWIAKNDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGGTGGCTTTGGTTCTTCTTGGATGTTCCACATCAGTTTCGTCATTGCCACTCTTGATGACATGGCATGTGAACATCATCAATGAGTTGAATAGTGGAGAGAA
GCTATTCGTGCACTGTAAATCAAGGGACGACGATTTGGGAGAACACAACCTCGATGTTGGAACTCAATACAGCTTTACTTTCAAAGACAATATATGGAATACTACACTTT
TTTGGTGCTACTTGCAGAAGCCAAACAATGCTCATGCTGCTTTTGATGTGTACTGGATTGACACAAGTAGTCATCATTGGCTTTATACAAGATGCGACTGGAAAACTTGC
ATTTGGATCGCCAAAAATGATGGAATTTACATAAAGAATATCCCTTTGAATCAAGAGGAGCTTGTTCACAAGTGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGGTGGCTTTGGTTCTTCTTGGATGTTCCACATCAGTTTCGTCATTGCCACTCTTGATGACATGGCATGTGAACATCATCAATGAGTTGAATAGTGGAGAGAA
GCTATTCGTGCACTGTAAATCAAGGGACGACGATTTGGGAGAACACAACCTCGATGTTGGAACTCAATACAGCTTTACTTTCAAAGACAATATATGGAATACTACACTTT
TTTGGTGCTACTTGCAGAAGCCAAACAATGCTCATGCTGCTTTTGATGTGTACTGGATTGACACAAGTAGTCATCATTGGCTTTATACAAGATGCGACTGGAAAACTTGC
ATTTGGATCGCCAAAAATGATGGAATTTACATAAAGAATATCCCTTTGAATCAAGAGGAGCTTGTTCACAAGTGGGAATGA
Protein sequenceShow/hide protein sequence
MIVVALVLLGCSTSVSSLPLLMTWHVNIINELNSGEKLFVHCKSRDDDLGEHNLDVGTQYSFTFKDNIWNTTLFWCYLQKPNNAHAAFDVYWIDTSSHHWLYTRCDWKTC
IWIAKNDGIYIKNIPLNQEELVHKWE