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MS024392 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024392
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioneukaryotic translation initiation factor 3 subunit C-like
Genome locationscaffold475:94390..97143
RNA-Seq ExpressionMS024392
SyntenyMS024392
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141935.1 eukaryotic translation initiation factor 3 subunit C-like [Momordica charantia]7.8e-1484.13Show/hide
Query:  MDTTESRAPKKTPDKKSKHGKTENEEPVKKRKDQPSKTKENNEKVAEKKKLKENHGRLSDKSE
        MDT ++RAPKKTPDKKSK GKTENEE VKKRKDQPSKTK N+EKVAEKKKLKEN+G LSDK E
Subjt:  MDTTESRAPKKTPDKKSKHGKTENEEPVKKRKDQPSKTKENNEKVAEKKKLKENHGRLSDKSE
TrEMBL top hitse value%identityAlignment
A0A6J1CJI4 eukaryotic translation initiation factor 3 subunit C-like3.8e-1484.13Show/hide
Query:  MDTTESRAPKKTPDKKSKHGKTENEEPVKKRKDQPSKTKENNEKVAEKKKLKENHGRLSDKSE
        MDT ++RAPKKTPDKKSK GKTENEE VKKRKDQPSKTK N+EKVAEKKKLKEN+G LSDK E
Subjt:  MDTTESRAPKKTPDKKSKHGKTENEEPVKKRKDQPSKTKENNEKVAEKKKLKENHGRLSDKSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACTACAGAGTCACGTGCACCTAAAAAGACGCCTGACAAAAAGTCAAAACATGGCAAAACAGAGAACGAAGAACCGGTGAAAAAGAGGAAAGACCAACCGAGTAA
AACAAAAGAGAATAATGAAAAGGTTGCCGAAAAGAAGAAACTCAAGGAGAACCATGGGCGGCTAAGTGACAAGAGCGAGTTGGAAGTGGTGCCAATGGAGCCAACCGAAA
AAGAACTAACCATGTCATATATGGCGTCATTCCTCGAAGATCAAGATGGAACAACAATGTGGGGCGTCCAAACCCTAGCATTTGGGAGTGCAATAGGGAAGCTTGATGGC
ATTATTACAAGCTTAAATATGATTCTTGAACAATTGAACACAAGTGATGGACTGGAGGATGACAGACTCGATAGGTTTATGATGATAGGGGATGTGAATGTGGGAACTGC
ATTCGAAACTGTCTACGAGGCATGCGATGGACTTGGTAATATTGATGAACAAATCAATGAGGTCATAAGATGTATTGACAAGGACAAAATTATTGAGAAGATGAAGAGGA
CCCAAGCAGCTGGGGCAACGGAGACATCCAAACTTAGACACCCTAAGCTTCCAAAGACACCAGTTAGTAGAGGAGTGAATAATTTGCAACGGGATCAAGTACTTCCCCAT
GAGGTTCGACTTTCAGAAGGGAGGTCAGCACTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACTACAGAGTCACGTGCACCTAAAAAGACGCCTGACAAAAAGTCAAAACATGGCAAAACAGAGAACGAAGAACCGGTGAAAAAGAGGAAAGACCAACCGAGTAA
AACAAAAGAGAATAATGAAAAGGTTGCCGAAAAGAAGAAACTCAAGGAGAACCATGGGCGGCTAAGTGACAAGAGCGAGTTGGAAGTGGTGCCAATGGAGCCAACCGAAA
AAGAACTAACCATGTCATATATGGCGTCATTCCTCGAAGATCAAGATGGAACAACAATGTGGGGCGTCCAAACCCTAGCATTTGGGAGTGCAATAGGGAAGCTTGATGGC
ATTATTACAAGCTTAAATATGATTCTTGAACAATTGAACACAAGTGATGGACTGGAGGATGACAGACTCGATAGGTTTATGATGATAGGGGATGTGAATGTGGGAACTGC
ATTCGAAACTGTCTACGAGGCATGCGATGGACTTGGTAATATTGATGAACAAATCAATGAGGTCATAAGATGTATTGACAAGGACAAAATTATTGAGAAGATGAAGAGGA
CCCAAGCAGCTGGGGCAACGGAGACATCCAAACTTAGACACCCTAAGCTTCCAAAGACACCAGTTAGTAGAGGAGTGAATAATTTGCAACGGGATCAAGTACTTCCCCAT
GAGGTTCGACTTTCAGAAGGGAGGTCAGCACTTCAATAG
Protein sequenceShow/hide protein sequence
MDTTESRAPKKTPDKKSKHGKTENEEPVKKRKDQPSKTKENNEKVAEKKKLKENHGRLSDKSELEVVPMEPTEKELTMSYMASFLEDQDGTTMWGVQTLAFGSAIGKLDG
IITSLNMILEQLNTSDGLEDDRLDRFMMIGDVNVGTAFETVYEACDGLGNIDEQINEVIRCIDKDKIIEKMKRTQAAGATETSKLRHPKLPKTPVSRGVNNLQRDQVLPH
EVRLSEGRSALQ