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MS024402 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024402
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSWIB domain-containing protein
Genome locationscaffold111:65662..70583
RNA-Seq ExpressionMS024402
SyntenyMS024402
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9606954.1 putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus]4.5e-1252.94Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PE+
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI

KAG6577105.1 hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1769.01Show/hide
Query:  PAKITVAAHIL-SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG
        P  IT+   ++ +KK+Q KPQLCKFLGIPLV+PRGDIPILI+KFLK YQ QSPG+ KD  WEENLKA L G
Subjt:  PAKITVAAHIL-SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG

KAG7015106.1 hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2275Show/hide
Query:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG
        MAPAKI+V A +LS+K+Q KPQLCKFLGIPL++PRGDIPILI+KFLK YQ QSPG+ KD  WEENLKA L G
Subjt:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCG

XP_019421169.1 PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius]4.5e-1252.94Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PE+
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI

XP_022136393.1 uncharacterized protein LOC111008113 [Momordica charantia]7.4e-3986.46Show/hide
Query:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEIK-----DYKDSSMKS
        MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPE+       + DSS+++
Subjt:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEIK-----DYKDSSMKS

TrEMBL top hitse value%identityAlignment
A0A4P1QT43 SWIB domain-containing protein2.2e-1252.94Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PE+
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI

A0A4P1RHA4 SWIB domain-containing protein2.2e-1252.94Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PE+
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI

A0A6A4Q0B8 Putative transcription regulator SWI/SNF-BAF60b family2.2e-1252.94Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PE+
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI

A0A6A5MEA5 Putative transcription regulator SWI/SNF-BAF60b family2.2e-1252.94Show/hide
Query:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI
        SK  +   +LCKF+GIP  S R +I ++ISKFLKLY  +SPG++KD+IWE+NL+ +L GK+ +G PE+
Subjt:  SKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEI

A0A6J1C7G5 uncharacterized protein LOC1110081133.6e-3986.46Show/hide
Query:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEIK-----DYKDSSMKS
        MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPE+       + DSS+++
Subjt:  MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEIK-----DYKDSSMKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCGCCAAGATTACTGTCGCCGCTCATATTCTCAGCAAGAAACTTCAATTCAAACCTCAGCTCTGCAAGTTCCTCGGCATTCCTCTCGTTTCTCCCCGCGGCGA
TATTCCCATCCTAATCTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGGCTCAGAAAGGACAGGATCTGGGAGGAGAACTTGAAAGCCATATTATGCGGAAAAG
ACGGAGTTGGGATGCCAGAGATCAAGGACTACAAGGACAGCTCCATGAAGTCATGCTTGAGTCTCTGTCGAAGATCGATCAATGGAGTTGGAGTTGTGAGATTTAGTTGT
AGGGTCGTTGTTTGTGATGGAAGAGACGAAGGAGCGGTGTGTAGTTCAGGAGGAAGAAATGCATGTAGTGCACTAGTGAGTTTGGAAGGGAGAAACTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCGCCAAGATTACTGTCGCCGCTCATATTCTCAGCAAGAAACTTCAATTCAAACCTCAGCTCTGCAAGTTCCTCGGCATTCCTCTCGTTTCTCCCCGCGGCGA
TATTCCCATCCTAATCTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGGCTCAGAAAGGACAGGATCTGGGAGGAGAACTTGAAAGCCATATTATGCGGAAAAG
ACGGAGTTGGGATGCCAGAGATCAAGGACTACAAGGACAGCTCCATGAAGTCATGCTTGAGTCTCTGTCGAAGATCGATCAATGGAGTTGGAGTTGTGAGATTTAGTTGT
AGGGTCGTTGTTTGTGATGGAAGAGACGAAGGAGCGGTGTGTAGTTCAGGAGGAAGAAATGCATGTAGTGCACTAGTGAGTTTGGAAGGGAGAAACTCGTGA
Protein sequenceShow/hide protein sequence
MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDRIWEENLKAILCGKDGVGMPEIKDYKDSSMKSCLSLCRRSINGVGVVRFSC
RVVVCDGRDEGAVCSSGGRNACSALVSLEGRNS