; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024404 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024404
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationscaffold111:191514..195826
RNA-Seq ExpressionMS024404
SyntenyMS024404
Gene Ontology termsGO:0009585 - red, far-red light phototransduction (biological process)
GO:0010018 - far-red light signaling pathway (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:1900056 - negative regulation of leaf senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR031052 - FHY3/FAR1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136410.1 protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Momordica charantia]2.4e-11298.62Show/hide
Query:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
        S  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
Subjt:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET

Query:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
        DMI+VEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
Subjt:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ

Query:  DEQHLRSAQLHGSTSRHT
        DEQHLRSAQLHGSTSRHT
Subjt:  DEQHLRSAQLHGSTSRHT

XP_022136412.1 protein FAR-RED IMPAIRED RESPONSE 1 isoform X2 [Momordica charantia]8.4e-11097.71Show/hide
Query:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
        S  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
Subjt:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET

Query:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
        DMI+VEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGL  LNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
Subjt:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ

Query:  DEQHLRSAQLHGSTSRHT
        DEQHLRSAQLHGSTSRHT
Subjt:  DEQHLRSAQLHGSTSRHT

XP_022931375.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucurbita moschata]7.4e-9888.84Show/hide
Query:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI
        TEFRQNR QRYNDLCK+AIELSEEGS SEECYNIA+RTLVEALK CVNINNSKSAPAESSV+AHGLR EE+ENQGSITAKTNK+KS +RKRKVQ+E  MI
Subjt:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI

Query:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ
        LVE Q+NLQQMDSLTSDS+T++GYYGTQQNVQGLVQLNLMEPPHDA SYYV QQSIQGLGQLNTIA NHDGYFGAQH+SIHALVDYRPATSYNYSLQDEQ
Subjt:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ

Query:  HLRSAQLHGSTSRHT
        HLRSAQLHGS+SRHT
Subjt:  HLRSAQLHGSTSRHT

XP_023552434.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucurbita pepo subsp. pepo]7.4e-9888.84Show/hide
Query:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI
        TEFRQNR QRYNDLCK+AIELSEEGS SEECYNIA+RTLVEALK CVNINNSKSAPAESSV+AHGLR EE+ENQGSITAKTNK+KS +RKRKVQ+E  MI
Subjt:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI

Query:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ
        LVE Q+NLQQMDSLTSDS+T++GYYGTQQNVQGLVQLNLMEPPHDA SYYV QQSIQGLGQLNTIA NHDGYFGAQH+SIHALVDYRPATSYNYSLQDEQ
Subjt:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ

Query:  HLRSAQLHGSTSRHT
        HLRSAQLHGS+SRHT
Subjt:  HLRSAQLHGSTSRHT

XP_038881047.1 protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Benincasa hispida]1.1e-9889.3Show/hide
Query:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI
        TEFRQNRVQRYNDLCK+AIELSEEGS SEECYNIAIRTLVEALK CVNINNSKSAPAESSV+AHGLR EEEENQGSITAK NK+KST+RKRKVQ ETDMI
Subjt:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI

Query:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ
        LVE Q+NLQQMD LTSDS+T++GYYGTQQNVQGLVQLNLMEPPHDA +YYVSQQSIQGLGQLNTIA NHDG+FG QHNSIH LVDYRPATSY+YSLQ+EQ
Subjt:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ

Query:  HLRSAQLHGSTSRHT
        HLRSAQLHGSTSRHT
Subjt:  HLRSAQLHGSTSRHT

TrEMBL top hitse value%identityAlignment
A0A0A0KXC8 Protein FAR1-RELATED SEQUENCE5.2e-9787.91Show/hide
Query:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI
        TEFRQNRVQRYNDLCK+AIELSEEGS SEECYNIAIRTLVEALK CVNINNSKSAPA+S V+AHGLR EEEENQGSITAK NK+KST+RKRKVQ ETDMI
Subjt:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI

Query:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ
        LVE Q+NLQ MDSLTSDS+ + GYYGTQQNVQGLVQLNLMEPPHDA SYYVSQQSIQGLGQLNTIA NHDG+FG QHNSIH LVDYRP TSY+YSLQ+EQ
Subjt:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ

Query:  HLRSAQLHGSTSRHT
        HLRSAQLHGSTSRHT
Subjt:  HLRSAQLHGSTSRHT

A0A6J1C3T9 Protein FAR1-RELATED SEQUENCE1.1e-11298.62Show/hide
Query:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
        S  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
Subjt:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET

Query:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
        DMI+VEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
Subjt:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ

Query:  DEQHLRSAQLHGSTSRHT
        DEQHLRSAQLHGSTSRHT
Subjt:  DEQHLRSAQLHGSTSRHT

A0A6J1C5G0 Protein FAR1-RELATED SEQUENCE4.1e-11097.71Show/hide
Query:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
        S  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET
Subjt:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAET

Query:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
        DMI+VEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGL  LNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ
Subjt:  DMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQ

Query:  DEQHLRSAQLHGSTSRHT
        DEQHLRSAQLHGSTSRHT
Subjt:  DEQHLRSAQLHGSTSRHT

A0A6J1EYG5 Protein FAR1-RELATED SEQUENCE3.6e-9888.84Show/hide
Query:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI
        TEFRQNR QRYNDLCK+AIELSEEGS SEECYNIA+RTLVEALK CVNINNSKSAPAESSV+AHGLR EE+ENQGSITAKTNK+KS +RKRKVQ+E  MI
Subjt:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI

Query:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ
        LVE Q+NLQQMDSLTSDS+T++GYYGTQQNVQGLVQLNLMEPPHDA SYYV QQSIQGLGQLNTIA NHDGYFGAQH+SIHALVDYRPATSYNYSLQDEQ
Subjt:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ

Query:  HLRSAQLHGSTSRHT
        HLRSAQLHGS+SRHT
Subjt:  HLRSAQLHGSTSRHT

A0A6J1J902 Protein FAR1-RELATED SEQUENCE3.6e-9888.84Show/hide
Query:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI
        TEFRQNR QRYNDLCK+AIELSEEGS SEECYNIA+RTLVEALK CVNINNSKSAPAESSV+AHGLR EE+ENQGSITAKTNK+KS +RKRKVQ+E  MI
Subjt:  TEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMI

Query:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ
        LVE Q+NLQQMDSLTSDS+T++GYYGTQQNVQGLVQLNLMEPPHDA SYYV QQSIQGLGQLNTIA NHDGYFGAQH+SIHALVDYRPATSYNYSLQDEQ
Subjt:  LVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQ

Query:  HLRSAQLHGSTSRHT
        HLRSAQLHGS+SRHT
Subjt:  HLRSAQLHGSTSRHT

SwissProt top hitse value%identityAlignment
Q3EBQ3 Protein FAR1-RELATED SEQUENCE 27.9e-1025.59Show/hide
Query:  NRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAE-SSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG
        NR+ R++DLC+R ++L    S+S+E    A++ L E +K CV+++NS   P+E   +   G    E E      +K +K+K   +KRKV    +      
Subjt:  NRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAE-SSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG

Query:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGY------FGAQHNSIHALVDYRPATSYNYSLQD
        +E  Q+ + ++S + T    Y  Q N++   +  L         YY +QQ+ QG   +++I   + G+       G  H+    +  Y    S   + Q 
Subjt:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGY------FGAQHNSIHALVDYRPATSYNYSLQD

Query:  EQHLRSAQLHG
        +   R + + G
Subjt:  EQHLRSAQLHG

Q5UBY2 Protein FAR1-RELATED SEQUENCE 12.1e-0730Show/hide
Query:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAES-SVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAE
        S +T+    + QRY DLC R+++LSEE S+SEE YN  +  L EAL+   N +N      ES SV A  L   EE+N      K +    T ++  +Q  
Subjt:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAES-SVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAE

Query:  TDMILVEGQEN--------------LQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEP
          +  ++ Q N                +M  + S +   NGY    QN+  L   ++  P
Subjt:  TDMILVEGQEN--------------LQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEP

Q6NQJ7 Protein FAR1-RELATED SEQUENCE 42.1e-0731.98Show/hide
Query:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTC-VNINNSK-SAPAESSVNAHGLREEEEENQGSIT-----------------
        S   E  Q+ ++R+NDLC+RAI L EEGS+S+E Y+IA+  + EA K C V IN  K  A  E +    G   +EE   GS +                 
Subjt:  SARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTC-VNINNSK-SAPAESSVNAHGLREEEEENQGSIT-----------------

Query:  AKTNKRK-----STSRKRKVQAETDMILVEGQENLQQM-DSLTSDSLTMNGYYGTQQNV-QGLVQLNLMEPP
        A+T + K     +TS+K K  A+++ +    QE  Q + D   S ++    ++ T   V Q L+  N    P
Subjt:  AKTNKRK-----STSRKRKVQAETDMILVEGQENLQQM-DSLTSDSLTMNGYYGTQQNV-QGLVQLNLMEPP

Q9LIE5 Protein FAR-RED ELONGATED HYPOCOTYL 32.5e-4043.87Show/hide
Query:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNS-KSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVE
        Q R+ RYNDLC+RA++L+EE S+S+E YNIA   +  A+  C  IN S +S P   +    GL   EE+N      KT+K+K+ ++KRKV  E D++ V 
Subjt:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNS-KSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVE

Query:  GQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQHLR
          E+LQQMD L+  ++ +  YYGTQQ+VQG+VQLNLM P  D  ++Y +QQ++QGL QLN+IA ++D Y+G Q       VD+    +++Y ++D+ ++R
Subjt:  GQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQHLR

Query:  SAQLHGSTSRHT
        + QLH   SRH+
Subjt:  SAQLHGSTSRHT

Q9SWG3 Protein FAR-RED IMPAIRED RESPONSE 15.6e-4854.03Show/hide
Query:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG
        Q RVQRYNDLC RA ELSEEG +SEE YNIA+RTLVE LK CV++NN+++   ES+   +     EEENQ     K  K+K+  RKRK Q E   +L E 
Subjt:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG

Query:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQH--NSIHALVDYRPATSYNYSLQDEQHL
        Q++LQ M++++S+++ MNGYYG QQNVQGL  LNLMEPPH+   YYV Q++IQGLGQLN+IA   D +F  Q   + +   +D+RP  ++ Y+LQ E+HL
Subjt:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQH--NSIHALVDYRPATSYNYSLQDEQHL

Query:  RSAQLHGSTSR
         SAQL GS+SR
Subjt:  RSAQLHGSTSR

Arabidopsis top hitse value%identityAlignment
AT2G32250.1 FAR1-related sequence 25.6e-1125.59Show/hide
Query:  NRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAE-SSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG
        NR+ R++DLC+R ++L    S+S+E    A++ L E +K CV+++NS   P+E   +   G    E E      +K +K+K   +KRKV    +      
Subjt:  NRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAE-SSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG

Query:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGY------FGAQHNSIHALVDYRPATSYNYSLQD
        +E  Q+ + ++S + T    Y  Q N++   +  L         YY +QQ+ QG   +++I   + G+       G  H+    +  Y    S   + Q 
Subjt:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGY------FGAQHNSIHALVDYRPATSYNYSLQD

Query:  EQHLRSAQLHG
        +   R + + G
Subjt:  EQHLRSAQLHG

AT2G32250.3 FAR1-related sequence 25.6e-1125.59Show/hide
Query:  NRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAE-SSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG
        NR+ R++DLC+R ++L    S+S+E    A++ L E +K CV+++NS   P+E   +   G    E E      +K +K+K   +KRKV    +      
Subjt:  NRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAE-SSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG

Query:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGY------FGAQHNSIHALVDYRPATSYNYSLQD
        +E  Q+ + ++S + T    Y  Q N++   +  L         YY +QQ+ QG   +++I   + G+       G  H+    +  Y    S   + Q 
Subjt:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGY------FGAQHNSIHALVDYRPATSYNYSLQD

Query:  EQHLRSAQLHG
        +   R + + G
Subjt:  EQHLRSAQLHG

AT3G22170.1 far-red elongated hypocotyls 31.8e-4143.87Show/hide
Query:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNS-KSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVE
        Q R+ RYNDLC+RA++L+EE S+S+E YNIA   +  A+  C  IN S +S P   +    GL   EE+N      KT+K+K+ ++KRKV  E D++ V 
Subjt:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNS-KSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVE

Query:  GQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQHLR
          E+LQQMD L+  ++ +  YYGTQQ+VQG+VQLNLM P  D  ++Y +QQ++QGL QLN+IA ++D Y+G Q       VD+    +++Y ++D+ ++R
Subjt:  GQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQHLR

Query:  SAQLHGSTSRHT
        + QLH   SRH+
Subjt:  SAQLHGSTSRHT

AT3G22170.2 far-red elongated hypocotyls 31.8e-4143.87Show/hide
Query:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNS-KSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVE
        Q R+ RYNDLC+RA++L+EE S+S+E YNIA   +  A+  C  IN S +S P   +    GL   EE+N      KT+K+K+ ++KRKV  E D++ V 
Subjt:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNS-KSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVE

Query:  GQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQHLR
          E+LQQMD L+  ++ +  YYGTQQ+VQG+VQLNLM P  D  ++Y +QQ++QGL QLN+IA ++D Y+G Q       VD+    +++Y ++D+ ++R
Subjt:  GQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHNSIHALVDYRPATSYNYSLQDEQHLR

Query:  SAQLHGSTSRHT
        + QLH   SRH+
Subjt:  SAQLHGSTSRHT

AT4G15090.1 FRS (FAR1 Related Sequences) transcription factor family4.0e-4954.03Show/hide
Query:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG
        Q RVQRYNDLC RA ELSEEG +SEE YNIA+RTLVE LK CV++NN+++   ES+   +     EEENQ     K  K+K+  RKRK Q E   +L E 
Subjt:  QNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLREEEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEG

Query:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQH--NSIHALVDYRPATSYNYSLQDEQHL
        Q++LQ M++++S+++ MNGYYG QQNVQGL  LNLMEPPH+   YYV Q++IQGLGQLN+IA   D +F  Q   + +   +D+RP  ++ Y+LQ E+HL
Subjt:  QENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQH--NSIHALVDYRPATSYNYSLQDEQHL

Query:  RSAQLHGSTSR
         SAQL GS+SR
Subjt:  RSAQLHGSTSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACGATGTCTGTTTCATTGTCACGCTCGGGAAGAGGGGTGGGTCTGGGTTTTGCGACGGAGCGTGTGAAAAGCGAGTGAATTTGACCCAATTCTTCCCCCACGG
TTTTCGATCGGCGAGAACAGAATTCAGACAGAACAGAGTACAGCGTTATAATGATTTATGTAAAAGAGCAATTGAATTGAGTGAAGAAGGATCGATTTCTGAGGAGTGTT
ATAATATTGCCATTCGTACATTAGTTGAAGCTTTGAAGACTTGTGTGAATATTAATAACTCCAAAAGTGCTCCAGCAGAATCTAGCGTTAATGCCCATGGTCTACGTGAG
GAAGAAGAAGAGAATCAAGGAAGCATAACTGCTAAAACAAATAAGAGGAAGAGTACCAGCAGAAAACGAAAGGTACAAGCAGAAACAGATATGATACTTGTTGAAGGACA
GGAAAACTTACAGCAAATGGATAGCTTAACGTCGGATAGCTTGACCATGAACGGATATTACGGAACTCAACAGAATGTTCAAGGATTGGTACAGTTGAACTTGATGGAGC
CTCCTCATGATGCGTCGTCGTACTATGTCAGTCAACAAAGCATTCAAGGGCTGGGACAATTAAATACTATTGCAACCAATCATGATGGATATTTTGGGGCTCAGCATAAT
AGCATTCATGCGCTGGTGGATTATCGGCCAGCGACGAGTTATAATTATAGTTTACAGGATGAGCAACATTTGAGATCTGCACAGCTTCATGGCAGTACTTCAAGACATAC
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACGATGTCTGTTTCATTGTCACGCTCGGGAAGAGGGGTGGGTCTGGGTTTTGCGACGGAGCGTGTGAAAAGCGAGTGAATTTGACCCAATTCTTCCCCCACGG
TTTTCGATCGGCGAGAACAGAATTCAGACAGAACAGAGTACAGCGTTATAATGATTTATGTAAAAGAGCAATTGAATTGAGTGAAGAAGGATCGATTTCTGAGGAGTGTT
ATAATATTGCCATTCGTACATTAGTTGAAGCTTTGAAGACTTGTGTGAATATTAATAACTCCAAAAGTGCTCCAGCAGAATCTAGCGTTAATGCCCATGGTCTACGTGAG
GAAGAAGAAGAGAATCAAGGAAGCATAACTGCTAAAACAAATAAGAGGAAGAGTACCAGCAGAAAACGAAAGGTACAAGCAGAAACAGATATGATACTTGTTGAAGGACA
GGAAAACTTACAGCAAATGGATAGCTTAACGTCGGATAGCTTGACCATGAACGGATATTACGGAACTCAACAGAATGTTCAAGGATTGGTACAGTTGAACTTGATGGAGC
CTCCTCATGATGCGTCGTCGTACTATGTCAGTCAACAAAGCATTCAAGGGCTGGGACAATTAAATACTATTGCAACCAATCATGATGGATATTTTGGGGCTCAGCATAAT
AGCATTCATGCGCTGGTGGATTATCGGCCAGCGACGAGTTATAATTATAGTTTACAGGATGAGCAACATTTGAGATCTGCACAGCTTCATGGCAGTACTTCAAGACATAC
CTGA
Protein sequenceShow/hide protein sequence
MKNDVCFIVTLGKRGGSGFCDGACEKRVNLTQFFPHGFRSARTEFRQNRVQRYNDLCKRAIELSEEGSISEECYNIAIRTLVEALKTCVNINNSKSAPAESSVNAHGLRE
EEEENQGSITAKTNKRKSTSRKRKVQAETDMILVEGQENLQQMDSLTSDSLTMNGYYGTQQNVQGLVQLNLMEPPHDASSYYVSQQSIQGLGQLNTIATNHDGYFGAQHN
SIHALVDYRPATSYNYSLQDEQHLRSAQLHGSTSRHT