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MS024439 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024439
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationscaffold66:702985..703338
RNA-Seq ExpressionMS024439
SyntenyMS024439
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142786.1 glycine-rich cell wall structural protein 1-like [Momordica charantia]1.0e-0657.3Show/hide
Query:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGGCCAG------CGGGGCCAGCSAGCGGGCGGGCGG
        ++RP P +A YRDVE+G+    S+TKDGGM IL GVG GLAT A V  LS+ GG    G       G GG C GC  GCGGGCGGGCGG
Subjt:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGGCCAG------CGGGGCCAGCSAGCGGGCGGGCGG
XP_022985127.1 glycine-rich protein 5-like [Cucurbita maxima]9.7e-0553.76Show/hide
Query:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGG----------CCAGCGGGGCCAGCSAGCGGGCGGGCGG
        A RP PR +  RD+ELG      + K+GGMTIL G   GLAT A V  LSN GGG             G GGGGC  GC  GCGGGCGGGCGG
Subjt:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGG----------CCAGCGGGGCCAGCSAGCGGGCGGGCGG
TrEMBL top hitse value%identityAlignment
A0A6J1CN85 glycine-rich cell wall structural protein 1-like5.0e-0757.3Show/hide
Query:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGGCCAG------CGGGGCCAGCSAGCGGGCGGGCGG
        ++RP P +A YRDVE+G+    S+TKDGGM IL GVG GLAT A V  LS+ GG    G       G GG C GC  GCGGGCGGGCGG
Subjt:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGGCCAG------CGGGGCCAGCSAGCGGGCGGGCGG
A0A6J1J409 glycine-rich protein 5-like4.7e-0553.76Show/hide
Query:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGG----------CCAGCGGGGCCAGCSAGCGGGCGGGCGG
        A RP PR +  RD+ELG      + K+GGMTIL G   GLAT A V  LSN GGG             G GGGGC  GC  GCGGGCGGGCGG
Subjt:  ASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGG----------CCAGCGGGGCCAGCSAGCGGGCGGGCGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTGCTTATCCTTTTCATTTTTGCTTGTCCTGCCATAATTGTTACTATAATTTTGTGTTATGCTTTTATATGTTGCGGCTGTCCTTCAATAAGACATGCCTCGAG
GCCACCCCCACGACGGGCGGTATACCGTGATGTGGAACTCGGGCAAGGCGCTCAAACAAGCCAAACCAAGGACGGAGGAATGACCATCTTGACCGGGGTAGGTCTCGGTT
TGGCTACCGGAGCTGCGGTTGCTGAGTTAAGCAACAGCGGAGGAGGCTGTTGCGCTGGCTGTGGTGGAGGTGGTTGTTGTGCTGGCTGCAGCGCTGGCTGTGGTGGTGGC
TGCGGTGGCGGTTGTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTGCTTATCCTTTTCATTTTTGCTTGTCCTGCCATAATTGTTACTATAATTTTGTGTTATGCTTTTATATGTTGCGGCTGTCCTTCAATAAGACATGCCTCGAG
GCCACCCCCACGACGGGCGGTATACCGTGATGTGGAACTCGGGCAAGGCGCTCAAACAAGCCAAACCAAGGACGGAGGAATGACCATCTTGACCGGGGTAGGTCTCGGTT
TGGCTACCGGAGCTGCGGTTGCTGAGTTAAGCAACAGCGGAGGAGGCTGTTGCGCTGGCTGTGGTGGAGGTGGTTGTTGTGCTGGCTGCAGCGCTGGCTGTGGTGGTGGC
TGCGGTGGCGGTTGTGGAGGTTGA
Protein sequenceShow/hide protein sequence
MSLLILFIFACPAIIVTIILCYAFICCGCPSIRHASRPPPRRAVYRDVELGQGAQTSQTKDGGMTILTGVGLGLATGAAVAELSNSGGGCCAGCGGGGCCAGCSAGCGGG
CGGGCGG