; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024457 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024457
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsecoisolariciresinol dehydrogenase-like
Genome locationscaffold359:192551..192820
RNA-Seq ExpressionMS024457
SyntenyMS024457
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142407.1 momilactone A synthase-like [Momordica charantia]3.0e-3881.73Show/hide
Query:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
        MTA  CSVIGGACPHAYTSSKHGMVGLMKNAAV               VVPTQM RDLFKLEDGD FPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
Subjt:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV

Query:  SGHN
        SGHN
Subjt:  SGHN

XP_022927564.1 secoisolariciresinol dehydrogenase-like isoform X1 [Cucurbita moschata]3.1e-2765.69Show/hide
Query:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG
        A  CS+IGG  P+AYTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FVSG
Subjt:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG

Query:  HN
        HN
Subjt:  HN

XP_022927565.1 secoisolariciresinol dehydrogenase-like isoform X2 [Cucurbita moschata]3.1e-2765.69Show/hide
Query:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG
        A  CS+IGG  P+AYTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FVSG
Subjt:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG

Query:  HN
        HN
Subjt:  HN

XP_022927566.1 secoisolariciresinol dehydrogenase-like isoform X3 [Cucurbita moschata]3.1e-2765.69Show/hide
Query:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG
        A  CS+IGG  P+AYTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FVSG
Subjt:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG

Query:  HN
        HN
Subjt:  HN

XP_022973162.1 secoisolariciresinol dehydrogenase-like [Cucurbita maxima]1.1e-2766.35Show/hide
Query:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
        MTA  CSVIGG  P+ YTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FV
Subjt:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV

Query:  SGHN
        SGHN
Subjt:  SGHN

TrEMBL top hitse value%identityAlignment
A0A6J1CMN7 momilactone A synthase-like1.4e-3881.73Show/hide
Query:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
        MTA  CSVIGGACPHAYTSSKHGMVGLMKNAAV               VVPTQM RDLFKLEDGD FPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
Subjt:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV

Query:  SGHN
        SGHN
Subjt:  SGHN

A0A6J1EI14 secoisolariciresinol dehydrogenase-like isoform X31.5e-2765.69Show/hide
Query:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG
        A  CS+IGG  P+AYTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FVSG
Subjt:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG

Query:  HN
        HN
Subjt:  HN

A0A6J1EID0 secoisolariciresinol dehydrogenase-like isoform X11.5e-2765.69Show/hide
Query:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG
        A  CS+IGG  P+AYTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FVSG
Subjt:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG

Query:  HN
        HN
Subjt:  HN

A0A6J1EPB9 secoisolariciresinol dehydrogenase-like isoform X21.5e-2765.69Show/hide
Query:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG
        A  CS+IGG  P+AYTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FVSG
Subjt:  AISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSG

Query:  HN
        HN
Subjt:  HN

A0A6J1I6S5 secoisolariciresinol dehydrogenase-like5.1e-2866.35Show/hide
Query:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
        MTA  CSVIGG  P+ YTSSKHG++GLMKNA V               VVP+QM RDLFKLEDGD FPN YSH KCG +L  EDIAEAALYL SDAS+FV
Subjt:  MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV

Query:  SGHN
        SGHN
Subjt:  SGHN

SwissProt top hitse value%identityAlignment
F1SWA0 Zerumbone synthase1.8e-0636.79Show/hide
Query:  SVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLF--------KLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASK
        SVI GA PH YT +KH +VGL K+ A                 VPT++              L     F    ++LK G  LM  D+AEA LYL ++ SK
Subjt:  SVIGGACPHAYTSSKHGMVGLMKNAAV---------------VVPTQMIRDLF--------KLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASK

Query:  FVSGHN
        +VSG N
Subjt:  FVSGHN

Q7FAE1 Momilactone A synthase2.5e-0836.19Show/hide
Query:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAA---------------VVVPTQMIRDLFKLEDG--DGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKF
        TA   S + GA  HAYT+SKH +VG  +NAA                 V T + R    ++D   +    + ++LK  G L  +DIA AAL+L SD  ++
Subjt:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAA---------------VVVPTQMIRDLFKLEDG--DGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKF

Query:  VSGHN
        VSG N
Subjt:  VSGHN

Q94K41 Short-chain dehydrogenase reductase 3b1.6e-0735.05Show/hide
Query:  IGGACPHAYTSSKHGMVGLMKNAA---------------VVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLME-EDIAEAALYLGSDASKFVSGHN
        I G  PH YT+SKHG++GL+K+A+                 V T ++ + FK+E      N  +     G++++   +AEAAL+L SD S +VSG N
Subjt:  IGGACPHAYTSSKHGMVGLMKNAA---------------VVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLME-EDIAEAALYLGSDASKFVSGHN

Q94KL7 Secoisolariciresinol dehydrogenase (Fragment)1.9e-0835.24Show/hide
Query:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAAVV---------------VPTQMIRDLFKLEDGDGFPN--HYSHLKCGGMLMEEDIAEAALYLGSDASKF
        TA   S +GG   HAY  SKH ++GL +N AV                +PT + +    +++ + F N  +++    G     ED+A AALYL SD +K+
Subjt:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAAVV---------------VPTQMIRDLFKLEDGDGFPN--HYSHLKCGGMLMEEDIAEAALYLGSDASKF

Query:  VSGHN
        VSGHN
Subjt:  VSGHN

Q9SCU0 Short-chain dehydrogenase reductase 2a5.5e-1140.35Show/hide
Query:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAAVV---------------VPTQMIRDLFK-----------LEDGDGFPNHYSHLKCGGMLMEEDIAEAAL
        TA    V+GG  PHAYT+SKH +VGL KNAA                 V T M+ + ++           +E+ + F    ++LK G  L   DIAEAAL
Subjt:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAAVV---------------VPTQMIRDLFK-----------LEDGDGFPNHYSHLKCGGMLMEEDIAEAAL

Query:  YLGSDASKFVSGHN
        YL SD SK+V+GHN
Subjt:  YLGSDASKFVSGHN

Arabidopsis top hitse value%identityAlignment
AT2G47130.1 NAD(P)-binding Rossmann-fold superfamily protein1.1e-0635.58Show/hide
Query:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAA----------------VVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV
        T    S IGG  PHAYT+SKH ++GL+K+A                  V      RD   +   + +      LK G +L    +AEAAL+L SD S +V
Subjt:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAA----------------VVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFV

Query:  SGHN
        SG N
Subjt:  SGHN

AT2G47140.1 NAD(P)-binding Rossmann-fold superfamily protein1.2e-0835.05Show/hide
Query:  IGGACPHAYTSSKHGMVGLMKNAA---------------VVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLME-EDIAEAALYLGSDASKFVSGHN
        I G  PH YT+SKHG++GL+K+A+                 V T ++ + FK+E      N  +     G++++   +AEAAL+L SD S +VSG N
Subjt:  IGGACPHAYTSSKHGMVGLMKNAA---------------VVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLME-EDIAEAALYLGSDASKFVSGHN

AT3G29250.1 NAD(P)-binding Rossmann-fold superfamily protein4.2e-0634.69Show/hide
Query:  IGGACPHAYTSSKHGMVGLMKNAAVVVPTQMIR--DLFKLEDGDGFPNHYS---------------HLKCGGMLMEEDIAEAALYLGSDASKFVSGHN
        IGG  PH+YT+SKH ++GL+++A   +    IR   +       G  + Y+               +LK G +L    IAEAAL+L SD S ++SG N
Subjt:  IGGACPHAYTSSKHGMVGLMKNAAVVVPTQMIR--DLFKLEDGDGFPNHYS---------------HLKCGGMLMEEDIAEAALYLGSDASKFVSGHN

AT3G29250.2 NAD(P)-binding Rossmann-fold superfamily protein4.2e-0634.69Show/hide
Query:  IGGACPHAYTSSKHGMVGLMKNAAVVVPTQMIR--DLFKLEDGDGFPNHYS---------------HLKCGGMLMEEDIAEAALYLGSDASKFVSGHN
        IGG  PH+YT+SKH ++GL+++A   +    IR   +       G  + Y+               +LK G +L    IAEAAL+L SD S ++SG N
Subjt:  IGGACPHAYTSSKHGMVGLMKNAAVVVPTQMIR--DLFKLEDGDGFPNHYS---------------HLKCGGMLMEEDIAEAALYLGSDASKFVSGHN

AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein3.9e-1240.35Show/hide
Query:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAAVV---------------VPTQMIRDLFK-----------LEDGDGFPNHYSHLKCGGMLMEEDIAEAAL
        TA    V+GG  PHAYT+SKH +VGL KNAA                 V T M+ + ++           +E+ + F    ++LK G  L   DIAEAAL
Subjt:  TAISCSVIGGACPHAYTSSKHGMVGLMKNAAVV---------------VPTQMIRDLFK-----------LEDGDGFPNHYSHLKCGGMLMEEDIAEAAL

Query:  YLGSDASKFVSGHN
        YL SD SK+V+GHN
Subjt:  YLGSDASKFVSGHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCAATCAGTTGCTCGGTCATTGGCGGGGCGTGCCCGCATGCATACACGAGCTCGAAGCATGGAATGGTGGGATTGATGAAGAATGCAGCTGTGGTAGTGCCCAC
ACAAATGATTAGGGACTTGTTTAAGCTTGAAGATGGTGATGGGTTTCCAAATCATTATTCTCATTTGAAATGTGGAGGTATGTTAATGGAAGAAGATATTGCAGAAGCTG
CTTTGTATTTAGGAAGTGATGCGTCTAAGTTTGTGAGTGGCCACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCGCAATCAGTTGCTCGGTCATTGGCGGGGCGTGCCCGCATGCATACACGAGCTCGAAGCATGGAATGGTGGGATTGATGAAGAATGCAGCTGTGGTAGTGCCCAC
ACAAATGATTAGGGACTTGTTTAAGCTTGAAGATGGTGATGGGTTTCCAAATCATTATTCTCATTTGAAATGTGGAGGTATGTTAATGGAAGAAGATATTGCAGAAGCTG
CTTTGTATTTAGGAAGTGATGCGTCTAAGTTTGTGAGTGGCCACAATTAA
Protein sequenceShow/hide protein sequence
MTAISCSVIGGACPHAYTSSKHGMVGLMKNAAVVVPTQMIRDLFKLEDGDGFPNHYSHLKCGGMLMEEDIAEAALYLGSDASKFVSGHN