; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024466 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024466
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold359:349021..352354
RNA-Seq ExpressionMS024466
SyntenyMS024466
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583676.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.1e-12080.78Show/hide
Query:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG
        MKIAP+S SSLKNLV SD PKLKP K FF AANYG GP  PC+F+ESD       +AA AA PF GVLQDEDLLRKTH+ S +TST STGLYVLDLINHG
Subjt:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG

Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
         LEP+RTLYSKMLNKCT LRKLK GRVIH+HIQGS+FE+DLV+QN ILNMYAKCGSLEEA N+FDKMPTRDMVSWTV+ISG+SQSG A EAL LFPQM H
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        QGFQPNEFTLSSLLKASG  PSDDHGRQLHAFSLKYG+D+NVHVGSSLLDMYAR GHM+EA+AIF+GLA KNVVSWNALIA
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

XP_022142695.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia]6.1e-15799.28Show/hide
Query:  MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSL
        MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDL+NHGSL
Subjt:  MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSL

Query:  EPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQG
        EPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGS+EEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQG
Subjt:  EPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQG

Query:  FQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        FQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
Subjt:  FQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

XP_022927532.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Cucurbita moschata]2.1e-12080.78Show/hide
Query:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG
        MKIAP+S SSLKNLV SD PKLKP K FF AANYG GP  PC+F+ESD       +AA AA PF GVLQDEDLLRKTH+ S +TST STGLYVLDLINHG
Subjt:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG

Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
         LEP+RTLYSKMLNKCT LRKLK GRVIH+HIQGS+FE+DLV+QN ILNMYAKCGSLEEA N+FDKMPTRDMVSWTV+ISG+SQSG A EAL LFPQM H
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        QGFQPNEFTLSSLLKASG  PSDDHGRQLHAFSLKYG+D+NVHVGSSLLDMYAR GHM+EA+AIF+GLA KNVVSWNALIA
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

XP_022973115.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Cucurbita maxima]6.6e-12782.21Show/hide
Query:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG
        MKIAP+S SSL+NLV SD PKLKP KCFF AANYG G + PC+ +ESD+AEGR+WNAA AA PF GVLQDEDLLRKTHI S +TST STGLYVLDLINHG
Subjt:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG

Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
         LEP+RTLYSKMLNKCTHLRKLK GRVIH+HIQGS+FE+DLV+QN ILNMYAKCGSLEEA N+FDKMPTRDMVSWTV+ISG+SQSG A EAL LFPQM H
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        QGFQPNEFTLSSLLKASG  PSD+HGRQLHAFSLKYG+++NVHVGSSLLDMYAR GHM+EA+AIF+GLA KNVVSWNALIA
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

XP_023520189.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Cucurbita pepo subsp. pepo]2.8e-11777.59Show/hide
Query:  MKIAPL---------SLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGL
        MKIAP+         S SSLKNLV S+ PKL P KCFF AANYG G + PC+ +ESD       +AA AA PF GVLQDEDLLRKTHI S +TST STGL
Subjt:  MKIAPL---------SLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGL

Query:  YVLDLINHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEA
        YVLDLINHG LEP+RTLYSKMLNKCT LRKLK GRVIH+HIQGS+FE+DLV+QN ILNMYAKCGSLEEA N+FDKMPTRDMVSWTV+ISG+SQSG A EA
Subjt:  YVLDLINHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEA

Query:  LALFPQMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        L LFPQM HQGFQPNEFTLSSLLKASG  PSDDHGRQLHAFSLKYG+D+NVHVGSSLLDMYAR GHM+EA+AIF+GLA KNVVSWNALIA
Subjt:  LALFPQMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

TrEMBL top hitse value%identityAlignment
A0A1S3CMN0 pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X11.7e-11279.03Show/hide
Query:  LVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHGSLEPDRTLYSKMLN
        L  S  KLK L+CF FAA YG G  APCAF+ES+ AE ++WN A A  PF GVLQDEDLLR THI S   S+ STGLYVLDLIN GSLEP+RTLYSKMLN
Subjt:  LVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHGSLEPDRTLYSKMLN

Query:  KCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFTLSSLL
        KCT+LRKLKQGR IHAHIQ S+FE+D VL NFILNMYAKCGSLEEA+++FDKMPT+D VSWTV+ISG+SQS  ASEALALFP+MLH GFQPNEFTLSSLL
Subjt:  KCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFTLSSLL

Query:  KASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        KASG GPSDDHGRQLHAFSLKYGYD+NVHVGSSLLDMYAR GHMREAK IF  LA KNVVSWNALIA
Subjt:  KASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

A0A5D3CU56 Pentatricopeptide repeat-containing protein1.7e-11279.03Show/hide
Query:  LVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHGSLEPDRTLYSKMLN
        L  S  KLK L+CF FAA YG G  APCAF+ES+ AE ++WN A A  PF GVLQDEDLLR THI S   S+ STGLYVLDLIN GSLEP+RTLYSKMLN
Subjt:  LVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHGSLEPDRTLYSKMLN

Query:  KCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFTLSSLL
        KCT+LRKLKQGR IHAHIQ S+FE+D VL NFILNMYAKCGSLEEA+++FDKMPT+D VSWTV+ISG+SQS  ASEALALFP+MLH GFQPNEFTLSSLL
Subjt:  KCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFTLSSLL

Query:  KASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        KASG GPSDDHGRQLHAFSLKYGYD+NVHVGSSLLDMYAR GHMREAK IF  LA KNVVSWNALIA
Subjt:  KASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

A0A6J1CNX3 pentatricopeptide repeat-containing protein At3g24000, mitochondrial3.0e-15799.28Show/hide
Query:  MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSL
        MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDL+NHGSL
Subjt:  MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSL

Query:  EPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQG
        EPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGS+EEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQG
Subjt:  EPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQG

Query:  FQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        FQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
Subjt:  FQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

A0A6J1EHG0 pentatricopeptide repeat-containing protein At3g24000, mitochondrial1.0e-12080.78Show/hide
Query:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG
        MKIAP+S SSLKNLV SD PKLKP K FF AANYG GP  PC+F+ESD       +AA AA PF GVLQDEDLLRKTH+ S +TST STGLYVLDLINHG
Subjt:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG

Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
         LEP+RTLYSKMLNKCT LRKLK GRVIH+HIQGS+FE+DLV+QN ILNMYAKCGSLEEA N+FDKMPTRDMVSWTV+ISG+SQSG A EAL LFPQM H
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        QGFQPNEFTLSSLLKASG  PSDDHGRQLHAFSLKYG+D+NVHVGSSLLDMYAR GHM+EA+AIF+GLA KNVVSWNALIA
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

A0A6J1IAI9 pentatricopeptide repeat-containing protein At3g24000, mitochondrial3.2e-12782.21Show/hide
Query:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG
        MKIAP+S SSL+NLV SD PKLKP KCFF AANYG G + PC+ +ESD+AEGR+WNAA AA PF GVLQDEDLLRKTHI S +TST STGLYVLDLINHG
Subjt:  MKIAPLSLSSLKNLVFSD-PKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHI-SPQTSTPSTGLYVLDLINHG

Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
         LEP+RTLYSKMLNKCTHLRKLK GRVIH+HIQGS+FE+DLV+QN ILNMYAKCGSLEEA N+FDKMPTRDMVSWTV+ISG+SQSG A EAL LFPQM H
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        QGFQPNEFTLSSLLKASG  PSD+HGRQLHAFSLKYG+++NVHVGSSLLDMYAR GHM+EA+AIF+GLA KNVVSWNALIA
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

SwissProt top hitse value%identityAlignment
A8MQA3 Pentatricopeptide repeat-containing protein At4g210651.5e-3640.33Show/hide
Query:  GSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQML
        G +EPD   Y  ++   T +  ++ G  IH+ +  S F S + +QN +L++YA CG +  A  VFDKMP +D+V+W  +I+GF+++G   EALAL+ +M 
Subjt:  GSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQML

Query:  HQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALI
         +G +P+ FT+ SLL A     +   G+++H + +K G   N+H  + LLD+YARCG + EAK +FD +  KN VSW +LI
Subjt:  HQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALI

P93011 Pentatricopeptide repeat-containing protein At2g337601.4e-3435.91Show/hide
Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
        ++ P    ++ ++  C  L  L+ G+ +H H   S F  D  +Q  ++  Y+KCG +E AR VFD+MP + +V+W  ++SGF Q+GLA EA+ +F QM  
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
         GF+P+  T  SLL A     +   G  +H + +  G D+NV +G++L+++Y+RCG + +A+ +FD +   NV +W A+I+
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic1.4e-3435.6Show/hide
Query:  INHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFP
        + +  +EP    ++ +L  C    +L+ G+ IH  +  S F  DL     + NMYAKC  + EAR VFD+MP RD+VSW  +++G+SQ+G+A  AL +  
Subjt:  INHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFP

Query:  QMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIAVKTDKE
         M  +  +P+  T+ S+L A         G+++H ++++ G+D  V++ ++L+DMYA+CG +  A+ +FDG+  +NVVSWN++I      E
Subjt:  QMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIAVKTDKE

Q9LIC3 Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial1.1e-3639.65Show/hide
Query:  AATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSLEPDRTL--YSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLE
        +++P N VLQ         I P +   S G     L+    L P+     Y  +LN C   R L+ G+ +HAH+  + +     L+  +L  Y KC  LE
Subjt:  AATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSLEPDRTL--YSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLE

Query:  EARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFT----LSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYAR
        +AR V D+MP +++VSWT MIS +SQ+G +SEAL +F +M+    +PNEFT    L+S ++ASG G     G+Q+H   +K+ YD ++ VGSSLLDMYA+
Subjt:  EARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFT----LSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYAR

Query:  CGHMREAKAIFDGLAGKNVVSWNALIA
         G ++EA+ IF+ L  ++VVS  A+IA
Subjt:  CGHMREAKAIFDGLAGKNVVSWNALIA

Q9LIQ7 Pentatricopeptide repeat-containing protein At3g24000, mitochondrial2.5e-5256.28Show/hide
Query:  GSLEP-DRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQM
        GS  P DR  Y+ +L KCT  + L QGR++HAHI  S F  D+V+ N +LNMYAKCGSLEEAR VF+KMP RD V+WT +ISG+SQ     +AL  F QM
Subjt:  GSLEP-DRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQM

Query:  LHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        L  G+ PNEFTLSS++KA+        G QLH F +K G+D NVHVGS+LLD+Y R G M +A+ +FD L  +N VSWNALIA
Subjt:  LHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

Arabidopsis top hitse value%identityAlignment
AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein9.8e-3635.6Show/hide
Query:  INHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFP
        + +  +EP    ++ +L  C    +L+ G+ IH  +  S F  DL     + NMYAKC  + EAR VFD+MP RD+VSW  +++G+SQ+G+A  AL +  
Subjt:  INHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFP

Query:  QMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIAVKTDKE
         M  +  +P+  T+ S+L A         G+++H ++++ G+D  V++ ++L+DMYA+CG +  A+ +FDG+  +NVVSWN++I      E
Subjt:  QMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIAVKTDKE

AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein9.8e-3635.91Show/hide
Query:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH
        ++ P    ++ ++  C  L  L+ G+ +H H   S F  D  +Q  ++  Y+KCG +E AR VFD+MP + +V+W  ++SGF Q+GLA EA+ +F QM  
Subjt:  SLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLH

Query:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
         GF+P+  T  SLL A     +   G  +H + +  G D+NV +G++L+++Y+RCG + +A+ +FD +   NV +W A+I+
Subjt:  QGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein8.0e-3839.65Show/hide
Query:  AATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSLEPDRTL--YSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLE
        +++P N VLQ         I P +   S G     L+    L P+     Y  +LN C   R L+ G+ +HAH+  + +     L+  +L  Y KC  LE
Subjt:  AATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSLEPDRTL--YSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLE

Query:  EARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFT----LSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYAR
        +AR V D+MP +++VSWT MIS +SQ+G +SEAL +F +M+    +PNEFT    L+S ++ASG G     G+Q+H   +K+ YD ++ VGSSLLDMYA+
Subjt:  EARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFT----LSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYAR

Query:  CGHMREAKAIFDGLAGKNVVSWNALIA
         G ++EA+ IF+ L  ++VVS  A+IA
Subjt:  CGHMREAKAIFDGLAGKNVVSWNALIA

AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-5356.28Show/hide
Query:  GSLEP-DRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQM
        GS  P DR  Y+ +L KCT  + L QGR++HAHI  S F  D+V+ N +LNMYAKCGSLEEAR VF+KMP RD V+WT +ISG+SQ     +AL  F QM
Subjt:  GSLEP-DRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQM

Query:  LHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA
        L  G+ PNEFTLSS++KA+        G QLH F +K G+D NVHVGS+LLD+Y R G M +A+ +FD L  +N VSWNALIA
Subjt:  LHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIA

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-3740.33Show/hide
Query:  GSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQML
        G +EPD   Y  ++   T +  ++ G  IH+ +  S F S + +QN +L++YA CG +  A  VFDKMP +D+V+W  +I+GF+++G   EALAL+ +M 
Subjt:  GSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQML

Query:  HQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALI
         +G +P+ FT+ SLL A     +   G+++H + +K G   N+H  + LLD+YARCG + EAK +FD +  KN VSW +LI
Subjt:  HQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTGCACCACTTTCTCTGTCTTCTCTGAAGAATTTAGTGTTTTCTGATCCAAAACTCAAACCATTAAAATGTTTCTTCTTCGCCGCAAACTACGGCGCAGGTCC
GGCGGCTCCTTGTGCCTTCTCAGAATCGGATACGGCGGAAGGCCGAGAGTGGAACGCCGCCGTCGCCGCCACCCCTTTCAACGGCGTCCTCCAAGATGAAGACCTTCTCC
GCAAGACCCACATTTCTCCTCAAACTTCCACTCCTTCTACTGGGCTGTACGTTCTGGACCTCATCAACCATGGTTCTTTAGAACCCGACCGAACCCTTTACAGTAAAATG
CTGAACAAATGCACCCATTTGCGCAAACTCAAGCAGGGCAGAGTCATTCACGCCCACATCCAGGGTTCTAGTTTCGAGAGTGATCTGGTTCTTCAGAATTTCATTCTAAA
CATGTATGCGAAATGTGGCAGTCTCGAGGAGGCACGGAACGTGTTTGATAAAATGCCTACGAGAGATATGGTTAGTTGGACTGTGATGATTAGTGGCTTTTCTCAGAGTG
GTCTAGCATCTGAGGCTCTGGCTTTGTTCCCGCAGATGCTCCATCAGGGCTTCCAGCCAAACGAGTTTACCTTGTCTAGCCTGTTGAAGGCTTCTGGAACTGGCCCCAGT
GATGACCATGGCAGACAACTTCACGCATTTTCTCTCAAATATGGCTACGATGTGAATGTTCATGTGGGAAGTTCACTGCTGGATATGTATGCTAGGTGCGGGCATATGCG
AGAAGCCAAAGCGATTTTTGACGGGCTGGCTGGGAAAAACGTGGTGTCTTGGAATGCTCTGATTGCTGTGAAGACTGACAAGGAATTTAATGCTGGTGGAGATGATCGAT
GGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTGCACCACTTTCTCTGTCTTCTCTGAAGAATTTAGTGTTTTCTGATCCAAAACTCAAACCATTAAAATGTTTCTTCTTCGCCGCAAACTACGGCGCAGGTCC
GGCGGCTCCTTGTGCCTTCTCAGAATCGGATACGGCGGAAGGCCGAGAGTGGAACGCCGCCGTCGCCGCCACCCCTTTCAACGGCGTCCTCCAAGATGAAGACCTTCTCC
GCAAGACCCACATTTCTCCTCAAACTTCCACTCCTTCTACTGGGCTGTACGTTCTGGACCTCATCAACCATGGTTCTTTAGAACCCGACCGAACCCTTTACAGTAAAATG
CTGAACAAATGCACCCATTTGCGCAAACTCAAGCAGGGCAGAGTCATTCACGCCCACATCCAGGGTTCTAGTTTCGAGAGTGATCTGGTTCTTCAGAATTTCATTCTAAA
CATGTATGCGAAATGTGGCAGTCTCGAGGAGGCACGGAACGTGTTTGATAAAATGCCTACGAGAGATATGGTTAGTTGGACTGTGATGATTAGTGGCTTTTCTCAGAGTG
GTCTAGCATCTGAGGCTCTGGCTTTGTTCCCGCAGATGCTCCATCAGGGCTTCCAGCCAAACGAGTTTACCTTGTCTAGCCTGTTGAAGGCTTCTGGAACTGGCCCCAGT
GATGACCATGGCAGACAACTTCACGCATTTTCTCTCAAATATGGCTACGATGTGAATGTTCATGTGGGAAGTTCACTGCTGGATATGTATGCTAGGTGCGGGCATATGCG
AGAAGCCAAAGCGATTTTTGACGGGCTGGCTGGGAAAAACGTGGTGTCTTGGAATGCTCTGATTGCTGTGAAGACTGACAAGGAATTTAATGCTGGTGGAGATGATCGAT
GGTAG
Protein sequenceShow/hide protein sequence
MKIAPLSLSSLKNLVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLLRKTHISPQTSTPSTGLYVLDLINHGSLEPDRTLYSKM
LNKCTHLRKLKQGRVIHAHIQGSSFESDLVLQNFILNMYAKCGSLEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALALFPQMLHQGFQPNEFTLSSLLKASGTGPS
DDHGRQLHAFSLKYGYDVNVHVGSSLLDMYARCGHMREAKAIFDGLAGKNVVSWNALIAVKTDKEFNAGGDDRW