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MS024469 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024469
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold595_1:48332..49755
RNA-Seq ExpressionMS024469
SyntenyMS024469
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575375.1 hypothetical protein SDJN03_26014, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1339.31Show/hide
Query:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD
        L RG GKAGT  +GG                           +V+ATGK +E +GE  ED GE +  K +NNPK  +G ++  ++Y ++++    + DD+
Subjt:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD

Query:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL
        DIDEAEKKLM+ +  A      DD D +D+D   A  IPK+FSLKS  NN+YLRY  E+ D +G     GKN+
Subjt:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL

KAG7013916.1 hypothetical protein SDJN02_24085, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-1238.73Show/hide
Query:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD
        L RG GKAGT  +GG                           +V+ATGK +E +GE  ED GE +  K +NNPK  +G ++  ++Y           DD+
Subjt:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD

Query:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL
        DIDEAEKKLM+ +         D ED +D+D   A  IPK+FSLKS  NN+YLRY  E+ D +G     GKN+
Subjt:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL

XP_022155429.1 uncharacterized protein LOC111022577 [Momordica charantia]1.5e-5991.28Show/hide
Query:  MAGLFRGFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNE---EDQEYQEDEDPMEFEEDDDDIDEAEKKLMSSKEGAAMVEE
        MAGLF GFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNE   EDQEYQEDEDPMEFEEDDD IDEAEKKLMSSKEGAAM EE
Subjt:  MAGLFRGFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNE---EDQEYQEDEDPMEFEEDDDDIDEAEKKLMSSKEGAAMVEE

Query:  SDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSD---EEGGKNL
        SDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSD      GKN+
Subjt:  SDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSD---EEGGKNL

XP_022953933.1 uncharacterized protein LOC111456341 [Cucurbita moschata]4.1e-1238.73Show/hide
Query:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD
        L RG GKAGT  +GG                           +V+ATGK +E +GE  ED GE +  K +NNPK  +G ++  ++Y           DD+
Subjt:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD

Query:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL
        DIDEAEKKLM+ +         D ED +D+D   A  IPK+FSLKS  NN+YLRY  E+ D +G     GKN+
Subjt:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL

XP_022991799.1 uncharacterized protein LOC111488338 [Cucurbita maxima]2.0e-1139.31Show/hide
Query:  LFRGFGKAGTGLVGGLVQATGKVVETVGEAA---------------------------EDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD
        L RG GKAGT  +GG+++  GK+VETVG+ A                           ED GE +  K +NNPK  +G ++ D     D+D     ++D+
Subjt:  LFRGFGKAGTGLVGGLVQATGKVVETVGEAA---------------------------EDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD

Query:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL
        DIDEAEKKLM+ +  A      DD D +D+D   A  IP++FSLKS  NN+YLRY  E+ D +G     GKN+
Subjt:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL

TrEMBL top hitse value%identityAlignment
A0A1S3CBI1 uncharacterized protein LOC1034990804.1e-1037.08Show/hide
Query:  LFRGFGKAGTGLVGGLVQATGKVVET---------------------------VGEAAEDLGEALSGKKQNNPKTVEGHNE-----------EDQEYQED
        LF+G GKAGT ++GG V+  GK+VET                           VGEA ED GE +  K++  PK  E +++             ++Y+ED
Subjt:  LFRGFGKAGTGLVGGLVQATGKVVET---------------------------VGEAAEDLGEALSGKKQNNPKTVEGHNE-----------EDQEYQED

Query:  EDPM---EFEEDDDDIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSDEEGG
         D     +  EDDDDIDEAEKKLM S      +++S+ E+ E+E+ E   +IPK+ SLKS  N +YLRY   S+   G
Subjt:  EDPM---EFEEDDDDIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSDEEGG

A0A5A7T8Z0 Uncharacterized protein4.1e-1037.08Show/hide
Query:  LFRGFGKAGTGLVGGLVQATGKVVET---------------------------VGEAAEDLGEALSGKKQNNPKTVEGHNE-----------EDQEYQED
        LF+G GKAGT ++GG V+  GK+VET                           VGEA ED GE +  K++  PK  E +++             ++Y+ED
Subjt:  LFRGFGKAGTGLVGGLVQATGKVVET---------------------------VGEAAEDLGEALSGKKQNNPKTVEGHNE-----------EDQEYQED

Query:  EDPM---EFEEDDDDIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSDEEGG
         D     +  EDDDDIDEAEKKLM S      +++S+ E+ E+E+ E   +IPK+ SLKS  N +YLRY   S+   G
Subjt:  EDPM---EFEEDDDDIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSDEEGG

A0A6J1DQ91 uncharacterized protein LOC1110225777.4e-6091.28Show/hide
Query:  MAGLFRGFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNE---EDQEYQEDEDPMEFEEDDDDIDEAEKKLMSSKEGAAMVEE
        MAGLF GFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNE   EDQEYQEDEDPMEFEEDDD IDEAEKKLMSSKEGAAM EE
Subjt:  MAGLFRGFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNE---EDQEYQEDEDPMEFEEDDDDIDEAEKKLMSSKEGAAMVEE

Query:  SDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSD---EEGGKNL
        SDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSD      GKN+
Subjt:  SDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRYDENSD---EEGGKNL

A0A6J1GPP7 uncharacterized protein LOC1114563412.0e-1238.73Show/hide
Query:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD
        L RG GKAGT  +GG                           +V+ATGK +E +GE  ED GE +  K +NNPK  +G ++  ++Y           DD+
Subjt:  LFRGFGKAGTGLVGG---------------------------LVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD

Query:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL
        DIDEAEKKLM+ +         D ED +D+D   A  IPK+FSLKS  NN+YLRY  E+ D +G     GKN+
Subjt:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL

A0A6J1JVU2 uncharacterized protein LOC1114883389.8e-1239.31Show/hide
Query:  LFRGFGKAGTGLVGGLVQATGKVVETVGEAA---------------------------EDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD
        L RG GKAGT  +GG+++  GK+VETVG+ A                           ED GE +  K +NNPK  +G ++ D     D+D     ++D+
Subjt:  LFRGFGKAGTGLVGGLVQATGKVVETVGEAA---------------------------EDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDD

Query:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL
        DIDEAEKKLM+ +  A      DD D +D+D   A  IP++FSLKS  NN+YLRY  E+ D +G     GKN+
Subjt:  DIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEEANLIPKHFSLKSKHNNRYLRY-DENSDEEG-----GKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGCCTTTTCAGGGGATTTGGGAAAGCTGGAACTGGCCTTGTGGGTGGCCTTGTTCAAGCAACAGGGAAGGTGGTTGAAACTGTGGGAGAAGCCGCTGAGGATCT
TGGTGAAGCATTGTCAGGCAAGAAACAAAATAACCCTAAAACTGTGGAGGGACACAATGAAGAAGATCAAGAATATCAAGAAGATGAAGATCCTATGGAGTTCGAGGAAG
ACGATGACGACATAGATGAAGCTGAGAAGAAGCTGATGAGCTCGAAAGAGGGAGCAGCAATGGTGGAAGAATCCGACGATGAAGATCATGAAGACGAAGATGGAGAAGAA
GCAAACTTAATCCCAAAGCACTTCTCCCTCAAATCCAAGCACAACAATCGATACCTTCGTTACGACGAGAACTCCGACGAAGAAGGTGGAAAGAACTTGGAGCTCTTCTG
TGTCGACTACCGTTGGATTGGCGGCAAAATTTACGACGAAGATTCCGACGGTTGGGAAATTGAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGCCTTTTCAGGGGATTTGGGAAAGCTGGAACTGGCCTTGTGGGTGGCCTTGTTCAAGCAACAGGGAAGGTGGTTGAAACTGTGGGAGAAGCCGCTGAGGATCT
TGGTGAAGCATTGTCAGGCAAGAAACAAAATAACCCTAAAACTGTGGAGGGACACAATGAAGAAGATCAAGAATATCAAGAAGATGAAGATCCTATGGAGTTCGAGGAAG
ACGATGACGACATAGATGAAGCTGAGAAGAAGCTGATGAGCTCGAAAGAGGGAGCAGCAATGGTGGAAGAATCCGACGATGAAGATCATGAAGACGAAGATGGAGAAGAA
GCAAACTTAATCCCAAAGCACTTCTCCCTCAAATCCAAGCACAACAATCGATACCTTCGTTACGACGAGAACTCCGACGAAGAAGGTGGAAAGAACTTGGAGCTCTTCTG
TGTCGACTACCGTTGGATTGGCGGCAAAATTTACGACGAAGATTCCGACGGTTGGGAAATTGAAGTTTGA
Protein sequenceShow/hide protein sequence
MAGLFRGFGKAGTGLVGGLVQATGKVVETVGEAAEDLGEALSGKKQNNPKTVEGHNEEDQEYQEDEDPMEFEEDDDDIDEAEKKLMSSKEGAAMVEESDDEDHEDEDGEE
ANLIPKHFSLKSKHNNRYLRYDENSDEEGGKNLELFCVDYRWIGGKIYDEDSDGWEIEV