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MS024473 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024473
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold595_1:174435..175105
RNA-Seq ExpressionMS024473
SyntenyMS024473
Gene Ontology termsNA
InterPro domainsIPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039763.1 uncharacterized protein E6C27_scaffold122G00260 [Cucumis melo var. makuwa]3.1e-1068Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        HVTFKG NG+YLR  G+YLQ+SG D +HPSLIHEIFPQ DG + ++NV S
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

XP_004140503.3 uncharacterized protein LOC101208220 [Cucumis sativus]3.5e-0952.31Show/hide
Query:  FFRAQNWS----ISAHVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        F R  +W+       HVTFKG NGKYLR  G+YLQ+SG + +H SLIHEI+PQ DG + ++N+ S
Subjt:  FFRAQNWS----ISAHVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

XP_022155409.1 uncharacterized protein LOC111022557 [Momordica charantia]4.7e-1477.55Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVG
        HVTFKG NGKYL+ NG YLQ SGTDV++PS IHEIFP+NDGTIR++NVG
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVG

XP_038906851.1 uncharacterized protein LOC120092742 [Benincasa hispida]2.1e-1476Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        HVTFKG NGKYL+  G +LQ SGTD++HPSLIHEIFPQNDGT+R++NVGS
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

XP_038906982.1 uncharacterized protein LOC120092830 [Benincasa hispida]2.1e-1476Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        HVTFKG NGKYL+  G +LQ SGTD++HPSLIHEIFPQNDGT+R++NVGS
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

TrEMBL top hitse value%identityAlignment
A0A0A0KAP4 Agglutinin domain-containing protein4.9e-0962Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        HVTFKG NGKYLR  G+YLQ+SG + +H SLIHEI+PQ DG + ++N+ S
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

A0A0A0KFN1 Agglutinin domain-containing protein5.4e-0857.14Show/hide
Query:  VTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        VT KG NG+YLR  G+YLQ++G + +HPSLIHEI+PQ DG ++++N+ S
Subjt:  VTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

A0A5D3DM66 Agglutinin domain-containing protein1.5e-1068Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS
        HVTFKG NG+YLR  G+YLQ+SG D +HPSLIHEIFPQ DG + ++NV S
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS

A0A5D3DM92 Agglutinin domain-containing protein1.7e-0670Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQND
        HVTFKG NG+YLR  G+YLQ+SG + +HPS IHEIFPQ D
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQND

A0A6J1DQ71 uncharacterized protein LOC1110225572.3e-1477.55Show/hide
Query:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVG
        HVTFKG NGKYL+ NG YLQ SGTDV++PS IHEIFP+NDGTIR++NVG
Subjt:  HVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCTAGATTACTAATGAGAGTTGCTAATGAGGCAAAGTTAGAGGAGCTGGAAAACAAGTACAAAGCAATAACAGGAAAAACATCCGATGCAGCAACTCCCAAAAT
ATTTTGCTTTGCAACGATTCATCCCAAGTTCTTCAGAGCCCAAAACTGGAGCATATCTGCGCACGTGACCTTTAAGGGTCGCAATGGCAAGTACTTGAGACGCAATGGTG
AGTATTTGCAAATCTCTGGAACTGATGTTGATCATCCATCGCTTATCCATGAAATCTTCCCTCAGAATGATGGAACTATTCGTGTCAGAAATGTCGGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCTAGATTACTAATGAGAGTTGCTAATGAGGCAAAGTTAGAGGAGCTGGAAAACAAGTACAAAGCAATAACAGGAAAAACATCCGATGCAGCAACTCCCAAAAT
ATTTTGCTTTGCAACGATTCATCCCAAGTTCTTCAGAGCCCAAAACTGGAGCATATCTGCGCACGTGACCTTTAAGGGTCGCAATGGCAAGTACTTGAGACGCAATGGTG
AGTATTTGCAAATCTCTGGAACTGATGTTGATCATCCATCGCTTATCCATGAAATCTTCCCTCAGAATGATGGAACTATTCGTGTCAGAAATGTCGGTTCTTGA
Protein sequenceShow/hide protein sequence
MDPRLLMRVANEAKLEELENKYKAITGKTSDAATPKIFCFATIHPKFFRAQNWSISAHVTFKGRNGKYLRRNGEYLQISGTDVDHPSLIHEIFPQNDGTIRVRNVGS