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MS024490 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024490
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:427766..428035
RNA-Seq ExpressionMS024490
SyntenyMS024490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578680.1 hypothetical protein SDJN03_23128, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1265.85Show/hide
Query:  MEPLMAFTSRDFFLSSFLRLGILSFFSLLLIEALPTI--PNLIPDRRLDLPNDSSNSSLYLSLRYRNLPADAVSDSAMAVLE
        MEP MAFTSRD FL SF RLGILSFF+LL IEAL  +  PNL+    LDL    S+SSL  SLRYRNL ADA+S SAM  LE
Subjt:  MEPLMAFTSRDFFLSSFLRLGILSFFSLLLIEALPTI--PNLIPDRRLDLPNDSSNSSLYLSLRYRNLPADAVSDSAMAVLE

KAG6602403.1 E3 ubiquitin-protein ligase RGLG2, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1164.71Show/hide
Query:  MAFTSRDFFLSSFLRLGILSFFSLLLIEA---------LPT--IPNLIPDRRLDLPNDSSNSSLYLSLRYRNLPADA-VSDSAMA
        MA TSRDF L+SFLRLG LSFF+LL IEA         LPT  +  L+   RLDLPN SSNSSLYLSLRYRNLP  A VS S MA
Subjt:  MAFTSRDFFLSSFLRLGILSFFSLLLIEA---------LPT--IPNLIPDRRLDLPNDSSNSSLYLSLRYRNLPADA-VSDSAMA

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTCTCATGGCTTTCACAAGCCGCGATTTCTTCCTCAGCAGCTTCCTGAGGCTAGGGATTTTGAGCTTCTTCAGCCTCCTCCTAATCGAAGCCCTTCCGACAAT
TCCTAACCTGATCCCTGATCGTCGCCTGGATCTTCCGAACGACTCCTCAAATTCGTCGCTGTATCTCAGCCTCCGGTACCGGAATTTGCCTGCGGACGCGGTTTCGGACT
CCGCCATGGCGGTTTTAGAGAGAGAAATCGATCGGCGTGCTCTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTCTCATGGCTTTCACAAGCCGCGATTTCTTCCTCAGCAGCTTCCTGAGGCTAGGGATTTTGAGCTTCTTCAGCCTCCTCCTAATCGAAGCCCTTCCGACAAT
TCCTAACCTGATCCCTGATCGTCGCCTGGATCTTCCGAACGACTCCTCAAATTCGTCGCTGTATCTCAGCCTCCGGTACCGGAATTTGCCTGCGGACGCGGTTTCGGACT
CCGCCATGGCGGTTTTAGAGAGAGAAATCGATCGGCGTGCTCTGAAGTAG
Protein sequenceShow/hide protein sequence
MEPLMAFTSRDFFLSSFLRLGILSFFSLLLIEALPTIPNLIPDRRLDLPNDSSNSSLYLSLRYRNLPADAVSDSAMAVLEREIDRRALK