; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024534 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024534
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
Genome locationscaffold234:3207988..3208368
RNA-Seq ExpressionMS024534
SyntenyMS024534
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV90122.1 hypothetical protein CFOL_v3_33531 [Cephalotus follicularis]7.2e-2254.47Show/hide
Query:  ADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGGNLHLVFGLGLGCGVGLGLGIGQGIGYGF
        +DS+S WNW G +N  +RKD N F +       R+K     +V   GGG G+GCG G+GFG+V  GGIG GG++  VFG+GLGCGVG+G G GQGIGYGF
Subjt:  ADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGGNLHLVFGLGLGCGVGLGLGIGQGIGYGF

Query:  SFESLHSYFSDDNSDSKHRPLIQ
        S +SL SYF +   DSK RPLI+
Subjt:  SFESLHSYFSDDNSDSKHRPLIQ

KAA0051071.1 fibroin heavy chain [Cucumis melo var. makuwa]5.5e-2264Show/hide
Query:  SSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGLGIGQ
        SSSPW      NNF       FS    FD +RR   E     LVLEAGGGAGVGCG+G GFGLV  GGIG GG     +LHLVFGLG GCGVGLGLGIGQ
Subjt:  SSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGLGIGQ

Query:  GIGYGFSFESLHSYFSDDNSDSKHR
        G GYGFSFESL SYFS  NSD KH+
Subjt:  GIGYGFSFESLHSYFSDDNSDSKHR

KAG6578355.1 hypothetical protein SDJN03_22803, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3367.41Show/hide
Query:  MNADSSSPWNWK-GISNNFQRK-DQNKFSLPNIFDANRRKPNE-PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGL
        M +DS+SPW W   I+NNF  K D + FSLPNIFDANRR   + P LVL+AGGGAGVGCGVGLGFGLV  GGIG GG     +LHLVFGLGLGCGVGLGL
Subjt:  MNADSSSPWNWK-GISNNFQRK-DQNKFSLPNIFDANRRKPNE-PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGL

Query:  GIGQGIGYGFSFESLHSYFSDDNSDSKHR-PLIQV
        GIG+GIGYG SF+SL SYFSD   + + + PLIQ+
Subjt:  GIGQGIGYGFSFESLHSYFSDDNSDSKHR-PLIQV

KGN63146.1 hypothetical protein Csa_022245 [Cucumis sativus]1.5e-1956.72Show/hide
Query:  MNADSS-SPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNE-PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGLG
        M +DSS SPW              N F     FD +RR   E P LVLEAGGGAGVGCG+G+GFGLV  GGIG  G     +LHLVFGLG GCGVGLGLG
Subjt:  MNADSS-SPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNE-PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGLG

Query:  IGQGIGYGFSFESLHSYFSD--DNSDSKHRPLIQ
        IGQG GYG SF+S+ SYFS    N   K   LIQ
Subjt:  IGQGIGYGFSFESLHSYFSD--DNSDSKHRPLIQ

XP_010108896.1 keratin, type II cytoskeletal 5 [Morus notabilis]6.1e-2152.76Show/hide
Query:  DSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIGQGIG
        DS++ WNW     N +R  + +F +    D +R++  E   VL  G GAG+GCGVGLGFGLV  GG G GG    +L LV G+GLGCGVGLG+G GQG G
Subjt:  DSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIGQGIG

Query:  YGFSFESLHSYFSDDNSDSKHRPLIQV
        YG+S ESL S  SD +SDS  R LIQ+
Subjt:  YGFSFESLHSYFSDDNSDSKHRPLIQV

TrEMBL top hitse value%identityAlignment
A0A1Q3DCD5 Uncharacterized protein3.5e-2254.47Show/hide
Query:  ADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGGNLHLVFGLGLGCGVGLGLGIGQGIGYGF
        +DS+S WNW G +N  +RKD N F +       R+K     +V   GGG G+GCG G+GFG+V  GGIG GG++  VFG+GLGCGVG+G G GQGIGYGF
Subjt:  ADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGGNLHLVFGLGLGCGVGLGLGIGQGIGYGF

Query:  SFESLHSYFSDDNSDSKHRPLIQ
        S +SL SYF +   DSK RPLI+
Subjt:  SFESLHSYFSDDNSDSKHRPLIQ

A0A2N9FV55 Uncharacterized protein1.5e-2051.52Show/hide
Query:  MNADSSSPWN-WKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIG
        + ADS+S WN W G ++N ++ ++ +F +      NR K  E  +VL  GGG G+GCGVG+GFGLV  GGIG GG    +L LVFG+G+GCGVG+G G G
Subjt:  MNADSSSPWN-WKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIG

Query:  QGIGYGFSFESLHSYFS-DDNSDSKHRPLIQV
        QGIG GFS +SL SY S   +SDSK R +I++
Subjt:  QGIGYGFSFESLHSYFS-DDNSDSKHRPLIQV

A0A5A7UC28 Fibroin heavy chain2.7e-2264Show/hide
Query:  SSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGLGIGQ
        SSSPW      NNF       FS    FD +RR   E     LVLEAGGGAGVGCG+G GFGLV  GGIG GG     +LHLVFGLG GCGVGLGLGIGQ
Subjt:  SSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG-----NLHLVFGLGLGCGVGLGLGIGQ

Query:  GIGYGFSFESLHSYFSDDNSDSKHR
        G GYGFSFESL SYFS  NSD KH+
Subjt:  GIGYGFSFESLHSYFSDDNSDSKHR

A0A6A1VGE8 Uncharacterized protein7.3e-2049.61Show/hide
Query:  MNADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIGQ
        + AD+ S WNWKG   N ++ ++ +F +      N++K  E I  L  GGGAG+GCG G+GFGLV  GG+G  G    +L L FG+G+GCGVG+GLG G 
Subjt:  MNADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIGQ

Query:  GIGYGFSFESLHSYFS-DDNSDSKHRPLI
        GIGYG S++SL SY S + +SDS+ R LI
Subjt:  GIGYGFSFESLHSYFS-DDNSDSKHRPLI

W9S8Y9 Uncharacterized protein2.9e-2152.76Show/hide
Query:  DSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIGQGIG
        DS++ WNW     N +R  + +F +    D +R++  E   VL  G GAG+GCGVGLGFGLV  GG G GG    +L LV G+GLGCGVGLG+G GQG G
Subjt:  DSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGG----NLHLVFGLGLGCGVGLGLGIGQGIG

Query:  YGFSFESLHSYFSDDNSDSKHRPLIQV
        YG+S ESL S  SD +SDS  R LIQ+
Subjt:  YGFSFESLHSYFSDDNSDSKHRPLIQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66820.1 glycine-rich protein5.3e-0746.97Show/hide
Query:  GGGAGVGCGVGLGFGLVGAGGIGLGGNL---HLVFGLGLGCGVGLGLGIGQGIGYGFSFESLHSYF
        G G G+GCG G+G GL G  GIG    L   ++V G G+GCG+G G G G G+G G+SF+ +   F
Subjt:  GGGAGVGCGVGLGFGLVGAGGIGLGGNL---HLVFGLGLGCGVGLGLGIGQGIGYGFSFESLHSYF

AT4G10330.1 glycine-rich protein4.5e-0649.21Show/hide
Query:  GAGVGCGVGLGFGLVGAGGIGLG-GNLHLVFGLGLGCGVGLGLGIGQGIGYGFSFESLHSYFS
        G GVGCG G G GL+  GG+G G G   L FGLG G G G+G+G G G+G G +++   SY++
Subjt:  GAGVGCGVGLGFGLVGAGGIGLG-GNLHLVFGLGLGCGVGLGLGIGQGIGYGFSFESLHSYFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCCGATTCCAGTTCGCCATGGAACTGGAAGGGAATTTCAAACAATTTTCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCG
GAAGCCCAACGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGGCTTGGTTTCGGTCTGGTCGGCGCCGGCGGGATTGGCCTCGGCG
GCAACCTTCACCTGGTCTTCGGGCTCGGTCTCGGCTGCGGCGTCGGGCTAGGGCTTGGAATCGGCCAAGGGATTGGCTACGGCTTTAGCTTCGAATCTTTACATTCTTAT
TTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGCCGATTCCAGTTCGCCATGGAACTGGAAGGGAATTTCAAACAATTTTCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCG
GAAGCCCAACGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGGCTTGGTTTCGGTCTGGTCGGCGCCGGCGGGATTGGCCTCGGCG
GCAACCTTCACCTGGTCTTCGGGCTCGGTCTCGGCTGCGGCGTCGGGCTAGGGCTTGGAATCGGCCAAGGGATTGGCTACGGCTTTAGCTTCGAATCTTTACATTCTTAT
TTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCAGGTTTGA
Protein sequenceShow/hide protein sequence
MNADSSSPWNWKGISNNFQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGGIGLGGNLHLVFGLGLGCGVGLGLGIGQGIGYGFSFESLHSY
FSDDNSDSKHRPLIQV