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MS024552 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024552
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:3719953..3726531
RNA-Seq ExpressionMS024552
SyntenyMS024552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155953.1 uncharacterized protein LOC111022947 [Momordica charantia]1.8e-6672.96Show/hide
Query:  RLPKFCKSQSITVQPLPKEGKAKLVSFSKVNQTKFFHKKAFIGSTTTEEGTSTATRKDKGKQPESDGMSAFSNLSEVSFSSIGSQMSSRDMEGSEGQREE
        R  K C  Q +T +PLPKE K KLVSFSKVNQTK FHKKA IGST+TEEGT+ ATRKDKGK+PESDGMS F +LSEVSFSSIGSQ+SSRD+EGS  Q E 
Subjt:  RLPKFCKSQSITVQPLPKEGKAKLVSFSKVNQTKFFHKKAFIGSTTTEEGTSTATRKDKGKQPESDGMSAFSNLSEVSFSSIGSQMSSRDMEGSEGQREE

Query:  SGSLPPSALDPPDDYFICFEEGERTVEADRPGSGAEDGQREDEDDQHLDIDEEAHFPFTWKIVKALRVFNMCLRPISSKAAMKGSSVKTKEAREMI
         GSLPP  LDP DDYF+ FEE E TVE +   S AE+ QREDEDDQ  +IDE  HFPFT K+VKALRVFNMCLRPISSKAAMKG+S K KEAREM+
Subjt:  SGSLPPSALDPPDDYFICFEEGERTVEADRPGSGAEDGQREDEDDQHLDIDEEAHFPFTWKIVKALRVFNMCLRPISSKAAMKGSSVKTKEAREMI
TrEMBL top hitse value%identityAlignment
A0A6J1DPA4 uncharacterized protein LOC1110229478.6e-6772.96Show/hide
Query:  RLPKFCKSQSITVQPLPKEGKAKLVSFSKVNQTKFFHKKAFIGSTTTEEGTSTATRKDKGKQPESDGMSAFSNLSEVSFSSIGSQMSSRDMEGSEGQREE
        R  K C  Q +T +PLPKE K KLVSFSKVNQTK FHKKA IGST+TEEGT+ ATRKDKGK+PESDGMS F +LSEVSFSSIGSQ+SSRD+EGS  Q E 
Subjt:  RLPKFCKSQSITVQPLPKEGKAKLVSFSKVNQTKFFHKKAFIGSTTTEEGTSTATRKDKGKQPESDGMSAFSNLSEVSFSSIGSQMSSRDMEGSEGQREE

Query:  SGSLPPSALDPPDDYFICFEEGERTVEADRPGSGAEDGQREDEDDQHLDIDEEAHFPFTWKIVKALRVFNMCLRPISSKAAMKGSSVKTKEAREMI
         GSLPP  LDP DDYF+ FEE E TVE +   S AE+ QREDEDDQ  +IDE  HFPFT K+VKALRVFNMCLRPISSKAAMKG+S K KEAREM+
Subjt:  SGSLPPSALDPPDDYFICFEEGERTVEADRPGSGAEDGQREDEDDQHLDIDEEAHFPFTWKIVKALRVFNMCLRPISSKAAMKGSSVKTKEAREMI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTTTACCAAAATTTTGCAAATCACAAAGCATAACGGTTCAACCTTTACCAAAAGAAGGAAAAGCTAAATTAGTTTCCTTCTCAAAAGTTAATCAGACCAAGTT
CTTTCACAAGAAAGCTTTTATTGGGTCCACAACTACGGAGGAAGGTACTTCAACGGCCACAAGAAAAGATAAGGGGAAACAGCCAGAGTCAGACGGGATGTCTGCTTTTT
CTAATTTGTCCGAGGTATCCTTTTCTAGCATTGGTAGCCAAATGTCTAGTAGAGACATGGAGGGTAGCGAAGGCCAAAGAGAGGAGTCAGGCTCTTTACCTCCCTCAGCT
CTGGATCCTCCGGATGATTATTTTATTTGTTTTGAAGAGGGAGAACGGACTGTTGAGGCAGATCGGCCAGGCAGTGGTGCAGAGGATGGTCAAAGAGAAGATGAAGACGA
CCAACATCTAGATATAGATGAAGAAGCTCATTTCCCTTTTACATGGAAGATAGTGAAAGCCCTTAGAGTGTTTAATATGTGCCTTAGACCTATCTCTTCGAAAGCTGCTA
TGAAGGGAAGTTCAGTTAAAACGAAAGAAGCTAGAGAGATGATTGCTCAAATAAAGGCATGGGAAAAGAAGATAGAGGAGGCAGGTCAAAATACCAAAAACAAGGTGGGC
TTGTCAAAGGTGCTTTACTTAAATGGCCGAAACAAATTAAACTCCAACTTTCTTCTAACCCGAACCTCTTCGCAAGAAACCATTTCCTTTTGCAATCTTACCAATTCCAG
ATTTAGAGGCTTAATCTATCTTTCTAAGGCAATAGAAGAATTGGAAGGATCTCCAATAGAGGATTTTGAGGGAGGGGATGAGATGTCATCTCAATTGGCAAGAACTCAAG
AAAAAGCTCCCCGTCAATGCCTGGAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTTTACCAAAATTTTGCAAATCACAAAGCATAACGGTTCAACCTTTACCAAAAGAAGGAAAAGCTAAATTAGTTTCCTTCTCAAAAGTTAATCAGACCAAGTT
CTTTCACAAGAAAGCTTTTATTGGGTCCACAACTACGGAGGAAGGTACTTCAACGGCCACAAGAAAAGATAAGGGGAAACAGCCAGAGTCAGACGGGATGTCTGCTTTTT
CTAATTTGTCCGAGGTATCCTTTTCTAGCATTGGTAGCCAAATGTCTAGTAGAGACATGGAGGGTAGCGAAGGCCAAAGAGAGGAGTCAGGCTCTTTACCTCCCTCAGCT
CTGGATCCTCCGGATGATTATTTTATTTGTTTTGAAGAGGGAGAACGGACTGTTGAGGCAGATCGGCCAGGCAGTGGTGCAGAGGATGGTCAAAGAGAAGATGAAGACGA
CCAACATCTAGATATAGATGAAGAAGCTCATTTCCCTTTTACATGGAAGATAGTGAAAGCCCTTAGAGTGTTTAATATGTGCCTTAGACCTATCTCTTCGAAAGCTGCTA
TGAAGGGAAGTTCAGTTAAAACGAAAGAAGCTAGAGAGATGATTGCTCAAATAAAGGCATGGGAAAAGAAGATAGAGGAGGCAGGTCAAAATACCAAAAACAAGGTGGGC
TTGTCAAAGGTGCTTTACTTAAATGGCCGAAACAAATTAAACTCCAACTTTCTTCTAACCCGAACCTCTTCGCAAGAAACCATTTCCTTTTGCAATCTTACCAATTCCAG
ATTTAGAGGCTTAATCTATCTTTCTAAGGCAATAGAAGAATTGGAAGGATCTCCAATAGAGGATTTTGAGGGAGGGGATGAGATGTCATCTCAATTGGCAAGAACTCAAG
AAAAAGCTCCCCGTCAATGCCTGGAAAATTAA
Protein sequenceShow/hide protein sequence
MARLPKFCKSQSITVQPLPKEGKAKLVSFSKVNQTKFFHKKAFIGSTTTEEGTSTATRKDKGKQPESDGMSAFSNLSEVSFSSIGSQMSSRDMEGSEGQREESGSLPPSA
LDPPDDYFICFEEGERTVEADRPGSGAEDGQREDEDDQHLDIDEEAHFPFTWKIVKALRVFNMCLRPISSKAAMKGSSVKTKEAREMIAQIKAWEKKIEEAGQNTKNKVG
LSKVLYLNGRNKLNSNFLLTRTSSQETISFCNLTNSRFRGLIYLSKAIEELEGSPIEDFEGGDEMSSQLARTQEKAPRQCLEN