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MS024558 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024558
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhomeobox-leucine zipper protein ATHB-7-like
Genome locationscaffold963:26366..32591
RNA-Seq ExpressionMS024558
SyntenyMS024558
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141070.1 homeobox-leucine zipper protein ATHB-7-like [Momordica charantia]6.2e-0676.47Show/hide
Query:  LSTEDGSYETSDKWCAFDSDDGVIFEHQPCSSLQ
        L   +GSYETSDKWC FDSD GV+FE+QPCSSLQ
Subjt:  LSTEDGSYETSDKWCAFDSDDGVIFEHQPCSSLQ
TrEMBL top hitse value%identityAlignment
A0A6J1CGX7 homeobox-leucine zipper protein ATHB-7-like3.0e-0676.47Show/hide
Query:  LSTEDGSYETSDKWCAFDSDDGVIFEHQPCSSLQ
        L   +GSYETSDKWC FDSD GV+FE+QPCSSLQ
Subjt:  LSTEDGSYETSDKWCAFDSDDGVIFEHQPCSSLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGGCTCCGACGATTCCCACGGGTTGAAGCCACCGTCACATGTCAAAAACGAGCTACCGAGTATGGCGTCGGATGGGAAAGTGGCCGGAAAAGTGGACAGCAT
GGCGGCGGAATTTCTTTGTAGGTGGTGGGGAGGGAGGGAGGAGGAAAGGGAAGAAAGGCAGTGTGGTGGTGCGGTATTTATAGCTGGCACTACCGGTGGGGTCCACGAAA
AGGAACCACCGTGTGATATTATTACAACCCTTTTTAGCTTAGCTATGAAGAAACAAAGCCTAGTAGGTCCATGGGGACACGTGTCCTCGGCTTCGGATGGCTCGGCATGG
CTAGATAACTCGCAGTCAGAGCTGAATGAAGCGTTTTTCGCCGTCTATTCCTTCATTTCAAAGAGCCTCCGGCGACCGTTCCTGTCTACTGAAGATGGATCATATGAAAC
ATCTGATAAATGGTGCGCTTTCGACTCAGATGATGGTGTCATCTTTGAACATCAGCCCTGTAGCAGTTTGCAGAGGCAAGTTTCTGGGGATGACAACGATTTCTTGTTTG
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGGCTCCGACGATTCCCACGGGTTGAAGCCACCGTCACATGTCAAAAACGAGCTACCGAGTATGGCGTCGGATGGGAAAGTGGCCGGAAAAGTGGACAGCAT
GGCGGCGGAATTTCTTTGTAGGTGGTGGGGAGGGAGGGAGGAGGAAAGGGAAGAAAGGCAGTGTGGTGGTGCGGTATTTATAGCTGGCACTACCGGTGGGGTCCACGAAA
AGGAACCACCGTGTGATATTATTACAACCCTTTTTAGCTTAGCTATGAAGAAACAAAGCCTAGTAGGTCCATGGGGACACGTGTCCTCGGCTTCGGATGGCTCGGCATGG
CTAGATAACTCGCAGTCAGAGCTGAATGAAGCGTTTTTCGCCGTCTATTCCTTCATTTCAAAGAGCCTCCGGCGACCGTTCCTGTCTACTGAAGATGGATCATATGAAAC
ATCTGATAAATGGTGCGCTTTCGACTCAGATGATGGTGTCATCTTTGAACATCAGCCCTGTAGCAGTTTGCAGAGGCAAGTTTCTGGGGATGACAACGATTTCTTGTTTG
AATAG
Protein sequenceShow/hide protein sequence
MENGSDDSHGLKPPSHVKNELPSMASDGKVAGKVDSMAAEFLCRWWGGREEEREERQCGGAVFIAGTTGGVHEKEPPCDIITTLFSLAMKKQSLVGPWGHVSSASDGSAW
LDNSQSELNEAFFAVYSFISKSLRRPFLSTEDGSYETSDKWCAFDSDDGVIFEHQPCSSLQRQVSGDDNDFLFE