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MS024621 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024621
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1597:658060..658329
RNA-Seq ExpressionMS024621
SyntenyMS024621
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP55648.1 hypothetical protein KK1_001870 [Cajanus cajan]1.6e-0436.7Show/hide
Query:  IRFLQLIACVL-----LLLFHGWF---------LVGGGGQSDRKVSISGKGDDMS-YLHRHRVAAGDPW--------WPTRTEIVGRRYGYDYETDKHIV
        IRF  L++ +L      LLFHGWF         L+      +RK+  +G G D + +LHRHR     P          P +TEI  R     Y  +K +V
Subjt:  IRFLQLIACVL-----LLLFHGWF---------LVGGGGQSDRKVSISGKGDDMS-YLHRHRVAAGDPW--------WPTRTEIVGRRYGYDYETDKHIV

Query:  PSGPNPLHH
        P+GPNPLHH
Subjt:  PSGPNPLHH
TrEMBL top hitse value%identityAlignment
A0A151SLI2 Uncharacterized protein8.0e-0536.7Show/hide
Query:  IRFLQLIACVL-----LLLFHGWF---------LVGGGGQSDRKVSISGKGDDMS-YLHRHRVAAGDPW--------WPTRTEIVGRRYGYDYETDKHIV
        IRF  L++ +L      LLFHGWF         L+      +RK+  +G G D + +LHRHR     P          P +TEI  R     Y  +K +V
Subjt:  IRFLQLIACVL-----LLLFHGWF---------LVGGGGQSDRKVSISGKGDDMS-YLHRHRVAAGDPW--------WPTRTEIVGRRYGYDYETDKHIV

Query:  PSGPNPLHH
        P+GPNPLHH
Subjt:  PSGPNPLHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCATCAGATTTTTGCAGCTCATTGCCTGTGTATTATTGTTACTCTTTCATGGCTGGTTCCTTGTCGGCGGCGGCGGCCAGAGCGACAGGAAAGTTTCGATCTC
CGGGAAGGGGGACGACATGTCGTATTTACACCGCCACCGGGTTGCCGCCGGAGACCCGTGGTGGCCGACAAGAACCGAGATCGTCGGTCGACGGTACGGTTACGATTACG
AAACTGACAAACACATCGTTCCGAGTGGTCCAAATCCTCTGCATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCATCAGATTTTTGCAGCTCATTGCCTGTGTATTATTGTTACTCTTTCATGGCTGGTTCCTTGTCGGCGGCGGCGGCCAGAGCGACAGGAAAGTTTCGATCTC
CGGGAAGGGGGACGACATGTCGTATTTACACCGCCACCGGGTTGCCGCCGGAGACCCGTGGTGGCCGACAAGAACCGAGATCGTCGGTCGACGGTACGGTTACGATTACG
AAACTGACAAACACATCGTTCCGAGTGGTCCAAATCCTCTGCATCACTAA
Protein sequenceShow/hide protein sequence
MKSIRFLQLIACVLLLLFHGWFLVGGGGQSDRKVSISGKGDDMSYLHRHRVAAGDPWWPTRTEIVGRRYGYDYETDKHIVPSGPNPLHH