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MS024625 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024625
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold127:465824..466364
RNA-Seq ExpressionMS024625
SyntenyMS024625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF33015.1 conserved hypothetical protein [Ricinus communis]3.4e-0932.58Show/hide
Query:  MGC-MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGK
        M C  LS +T LEN +  P+V    R  G F ++   + PG   D+ + +  I  N +R + + +++ G  E E    + LST  IRDNA++   Y N  
Subjt:  MGC-MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGK

Query:  FSVTEINGKLLTRIRCVVKVKDLKMKIWKKLN
         +   + G ++ RI C+V +K     IW+KLN
Subjt:  FSVTEINGKLLTRIRCVVKVKDLKMKIWKKLN

PON83623.1 hypothetical protein TorRG33x02_205800 [Trema orientale]1.2e-0632.73Show/hide
Query:  MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT
        +++R TRLEN H+ P+V +  +        +  I P RHV V +SD ++ YN +       YV      +      + TS +RDN  I FG+ NG  +  
Subjt:  MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT

Query:  EINGKLLTRI
         I GK L R+
Subjt:  EINGKLLTRI

XP_015580975.1 uncharacterized protein LOC8276201 [Ricinus communis]1.2e-0931.69Show/hide
Query:  MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKF
        M   +S  + LEN H+D ++  V +  G    +  +I PG   D+ + D  I  N +R   + V+V+G  E E     S   S IRD+A++   + NGK 
Subjt:  MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKF

Query:  SVTEINGKLLTRIRCVVK----VKDLKMKIWKKLNGQEIVNC
        +V  + G +L RI C+VK    + ++  ++ KKLN    V+C
Subjt:  SVTEINGKLLTRIRCVVK----VKDLKMKIWKKLNGQEIVNC

XP_030956942.1 uncharacterized protein LOC115979117 [Quercus lobata]4.8e-1136.09Show/hide
Query:  MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKF
        M  + SR T ++N  ++ +V +V R PGNF V E  I  G ++ + ++DF I +N +R V +RVYV   ++      L +  S+IRD+ +I  GY NG  
Subjt:  MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKF

Query:  SVTEINGKLLTRIRCVVKVKDLKMKIWKKLNGQ
        + T I+  ++ RI  ++K+K    KI KKL G+
Subjt:  SVTEINGKLLTRIRCVVKVKDLKMKIWKKLNGQ

XP_035544280.1 uncharacterized protein LOC109003737 [Juglans regia]5.5e-0732.35Show/hide
Query:  SRVTRLENHHSDPVVYRVIRGPGNFL--VLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT
        SR T ++N     +   VI  PGNFL      EI  G H  + ++DF I  NVNR V++  Y  G +E +      + TS+IRDN  I   Y+NGK    
Subjt:  SRVTRLENHHSDPVVYRVIRGPGNFL--VLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT

Query:  EINGKLLTRIRCVVKVKDLKMKI----WKKLNGQEI
         + G ++     ++ +K    KI    WK  + +E+
Subjt:  EINGKLLTRIRCVVKVKDLKMKI----WKKLNGQEI

TrEMBL top hitse value%identityAlignment
A0A2I4G196 uncharacterized protein LOC1090037372.7e-0732.35Show/hide
Query:  SRVTRLENHHSDPVVYRVIRGPGNFL--VLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT
        SR T ++N     +   VI  PGNFL      EI  G H  + ++DF I  NVNR V++  Y  G +E +      + TS+IRDN  I   Y+NGK    
Subjt:  SRVTRLENHHSDPVVYRVIRGPGNFL--VLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT

Query:  EINGKLLTRIRCVVKVKDLKMKI----WKKLNGQEI
         + G ++     ++ +K    KI    WK  + +E+
Subjt:  EINGKLLTRIRCVVKVKDLKMKI----WKKLNGQEI

A0A2P5A3Z1 Uncharacterized protein8.5e-0636.7Show/hide
Query:  LSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVTE
        LS  TRLEN H++P+V R  +           I PG  V V +SD  I YN ++   L  + +G+E       L   TS +R +  I FG+ NG  +V  
Subjt:  LSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVTE

Query:  INGKLLTRI
        I GK L RI
Subjt:  INGKLLTRI

A0A2P5EDL3 Uncharacterized protein5.9e-0732.73Show/hide
Query:  MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT
        +++R TRLEN H+ P+V +  +        +  I P RHV V +SD ++ YN +       YV      +      + TS +RDN  I FG+ NG  +  
Subjt:  MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVT

Query:  EINGKLLTRI
         I GK L R+
Subjt:  EINGKLLTRI

B9STM9 Uncharacterized protein1.7e-0932.58Show/hide
Query:  MGC-MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGK
        M C  LS +T LEN +  P+V    R  G F ++   + PG   D+ + +  I  N +R + + +++ G  E E    + LST  IRDNA++   Y N  
Subjt:  MGC-MLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGK

Query:  FSVTEINGKLLTRIRCVVKVKDLKMKIWKKLN
         +   + G ++ RI C+V +K     IW+KLN
Subjt:  FSVTEINGKLLTRIRCVVKVKDLKMKIWKKLN

B9STN0 Uncharacterized protein3.8e-0627.44Show/hide
Query:  MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKF
        M   +S  + LEN H+D ++  V +  G    +  +I PG   D+ + D  I  N +R   + V+V+G  E E     S   S IRD+A++   + NGK 
Subjt:  MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKF

Query:  SVTEINGKLLTRI----------------------RCVVK----VKDLKMKIWKKLNGQEIVNC
        +V  + G +L RI                       C+VK    + ++  ++ KKLN    V+C
Subjt:  SVTEINGKLLTRI----------------------RCVVK----VKDLKMKIWKKLNGQEIVNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGCATGCTTTCGCGGGTAACCCGGCTCGAGAACCACCACTCGGACCCGGTTGTGTACCGGGTAATCCGAGGACCCGGTAACTTTCTGGTACTGGAACACGAGAT
CCTTCCGGGCCGACATGTCGACGTTAGCCACAGCGACTTCAAAATCCGATACAACGTTAATCGTCGCGTTAAATTACGTGTGTATGTACAAGGTAGAGAAGAGGCTGAGG
CTGCGACATGTTTGTCTTTGTCCACCTCTCAAATTAGGGACAATGCCAGAATTCGATTTGGGTATGTGAATGGAAAATTCTCTGTAACTGAGATCAACGGGAAATTGTTG
ACTAGAATCAGATGTGTTGTAAAGGTAAAGGACTTGAAGATGAAGATTTGGAAGAAACTTAATGGGCAGGAGATCGTAAATTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGCATGCTTTCGCGGGTAACCCGGCTCGAGAACCACCACTCGGACCCGGTTGTGTACCGGGTAATCCGAGGACCCGGTAACTTTCTGGTACTGGAACACGAGAT
CCTTCCGGGCCGACATGTCGACGTTAGCCACAGCGACTTCAAAATCCGATACAACGTTAATCGTCGCGTTAAATTACGTGTGTATGTACAAGGTAGAGAAGAGGCTGAGG
CTGCGACATGTTTGTCTTTGTCCACCTCTCAAATTAGGGACAATGCCAGAATTCGATTTGGGTATGTGAATGGAAAATTCTCTGTAACTGAGATCAACGGGAAATTGTTG
ACTAGAATCAGATGTGTTGTAAAGGTAAAGGACTTGAAGATGAAGATTTGGAAGAAACTTAATGGGCAGGAGATCGTAAATTGCTGA
Protein sequenceShow/hide protein sequence
MGCMLSRVTRLENHHSDPVVYRVIRGPGNFLVLEHEILPGRHVDVSHSDFKIRYNVNRRVKLRVYVQGREEAEAATCLSLSTSQIRDNARIRFGYVNGKFSVTEINGKLL
TRIRCVVKVKDLKMKIWKKLNGQEIVNC