; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024648 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024648
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeucine-rich receptor-like protein kinase family protein
Genome locationscaffold543:168231..168713
RNA-Seq ExpressionMS024648
SyntenyMS024648
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599941.1 putative LRR receptor-like serine/threonine-protein kinase IRK, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2852.9Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M SL+TLDFSGNNF GHIPTTMGNLQYLK+LNLSSNGFTDS PESV KC +LL+          NL  I                      ++ DLKA  
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN
        +LDLSRNRLNESI + IGG V LM+LKLDENF+G         C  LT++   +N
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN

XP_022146786.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Momordica charantia]2.4e-2855.13Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------NLSQI----------------SVTDLKASS
        M SL+TLDFSGNNF GHIPTTMGNLQYLK+LNLSSNGFT + P SV KC SLLA                NL Q+                ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------NLSQI----------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSIVLPYNFVSFISLFSS
        ILDLSRNRLN+SI + IGG + LM+LKLDENF+G GI  SI    N  S  +LF S
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSIVLPYNFVSFISLFSS

XP_022941816.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Cucurbita moschata]4.8e-2953.55Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M SL+TLDFSGNNF GHIPTTMGNLQYLK+LNLSSN FTDS PES  KC +LLA          NL  I                      ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN
        +LDLSRNRLNESI K IGG V LM+LKLDENF+G         C  LT++   +N
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN

XP_022994974.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Cucurbita maxima]2.4e-2852.9Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M SL+TLDFSGNNF GHIP TMGNLQYLK+LNLSSNGFTDS PE V KC +LLA          NL  I                      ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN
        +LDLSRNRLNESI + IGG V LM+LKLDENF+G         C  LT++   +N
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN

XP_023532285.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Cucurbita pepo subsp. pepo]3.6e-2953.55Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M  L+TLDFSGNNF GHIPTTMGNLQYLK+LNLSSNGFTDS PESV KC +LLA          NL  I                      ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN
        +LDLSRNRLNESI + IGG V LM+LKLDENF+G         C  LT++   +N
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN

TrEMBL top hitse value%identityAlignment
A0A5D3BED0 Putative LRR receptor-like serine/threonine-protein kinase IRK3.8e-2451.28Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M SL+T+DFSGNNF G IP TM NLQYLK+LNLSSNGFTDS PESV KC SLLA          NL +I                      ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSIVLPYNFVSFISLFSS
        ILDLS N+LNE+I   IGG V L++LKLD NF+G  I  SI    +  S  +LF+S
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSIVLPYNFVSFISLFSS

A0A6J1D0E6 probable LRR receptor-like serine/threonine-protein kinase IRK1.1e-2855.13Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------NLSQI----------------SVTDLKASS
        M SL+TLDFSGNNF GHIPTTMGNLQYLK+LNLSSNGFT + P SV KC SLLA                NL Q+                ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------NLSQI----------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSIVLPYNFVSFISLFSS
        ILDLSRNRLN+SI + IGG + LM+LKLDENF+G GI  SI    N  S  +LF S
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSIVLPYNFVSFISLFSS

A0A6J1FNJ0 probable LRR receptor-like serine/threonine-protein kinase IRK2.3e-2953.55Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M SL+TLDFSGNNF GHIPTTMGNLQYLK+LNLSSN FTDS PES  KC +LLA          NL  I                      ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN
        +LDLSRNRLNESI K IGG V LM+LKLDENF+G         C  LT++   +N
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN

A0A6J1FSP4 probable LRR receptor-like serine/threonine-protein kinase IRK1.3e-2454.61Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA------------------------NLSQIS--------VTDLKASS
        M SL+TLDFSGNNF G IP+TM NLQYLK+L+LSSNGFTDS PESV KC SLLA                        NLS  S        + DLK+ S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA------------------------NLSQIS--------VTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSI
        ILDLS NRLNE+I   IGG V L++LKLD NF+G  I +SI
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGILTSI

A0A6J1K4D1 probable LRR receptor-like serine/threonine-protein kinase IRK1.1e-2852.9Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS
        M SL+TLDFSGNNF GHIP TMGNLQYLK+LNLSSNGFTDS PE V KC +LLA          NL  I                      ++ DLKA S
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------NLSQI----------------------SVTDLKASS

Query:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN
        +LDLSRNRLNESI + IGG V LM+LKLDENF+G         C  LT++   +N
Subjt:  ILDLSRNRLNESILKEIGGVVPLMKLKLDENFIG---------CGILTSIVLPYN

SwissProt top hitse value%identityAlignment
F4J8G2 Receptor-like protein 335.7e-0938.71Show/hide
Query:  LDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN
        LDFSGN F G IP ++G L+ L +LNLSSNGFT  +P S+                +L+    LD+SRN+L+  I +E+G +  L  +    N
Subjt:  LDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN

P93194 Receptor-like protein kinase4.4e-0935.34Show/hide
Query:  SLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLP---------ESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMK
        +L   D SGNNF G IP ++GNL+ +  + LSSN  + S+P         E +   +++L  +    +++    S LD S N LN SI   +G +  L K
Subjt:  SLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLP---------ESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMK

Query:  LKLDENFIGCGILTSI
        L L EN    GI TS+
Subjt:  LKLDENFIGCGILTSI

Q7FZR1 Receptor-like protein 524.4e-0936.89Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN-
        +N+  T+DFSGN F G IP ++G L+ L +LNLS+NGFT  +P S       + NL ++          LD+S+N+L+  I  E+G +  L  +   +N 
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN-

Query:  FIG
        F+G
Subjt:  FIG

Q9LY03 Probable LRR receptor-like serine/threonine-protein kinase IRK3.9e-1028.93Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------------------------------------
        M SL+TLD S N F G +P ++GNL  LK+LN S NG   SLP S A C +LLA                                              
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------------------------------------

Query:  --------------------NLSQISVT--------DLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI---------GCGILTSIVLPYN
                            +LS+ S+T        +LK  S+LD+S N+LN  I +E GG V L +L+L+ N +          C  L S++L +N
Subjt:  --------------------NLSQISVT--------DLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI---------GCGILTSIVLPYN

Q9MA83 Receptor-like protein 306.7e-1038.14Show/hide
Query:  KTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI
        + +DFSGN F G+IP ++G L+ L+LLNLS N FT ++P+S       LANL+ +          LDLSRN+L+  I +++G +  L  +    N +
Subjt:  KTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI

Arabidopsis top hitse value%identityAlignment
AT3G05360.1 receptor like protein 304.8e-1138.14Show/hide
Query:  KTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI
        + +DFSGN F G+IP ++G L+ L+LLNLS N FT ++P+S       LANL+ +          LDLSRN+L+  I +++G +  L  +    N +
Subjt:  KTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI

AT3G05660.1 receptor like protein 334.0e-1038.71Show/hide
Query:  LDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN
        LDFSGN F G IP ++G L+ L +LNLSSNGFT  +P S+                +L+    LD+SRN+L+  I +E+G +  L  +    N
Subjt:  LDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN

AT3G23120.1 receptor like protein 385.3e-1038.14Show/hide
Query:  KTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI
        K +DFSGN F GHIP ++G L  L  LNLS N FT ++P S+A            ++T+L+    LDLSRN L+  I + +G +  L  +    N +
Subjt:  KTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI

AT3G56370.1 Leucine-rich repeat protein kinase family protein2.8e-1128.93Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------------------------------------
        M SL+TLD S N F G +P ++GNL  LK+LN S NG   SLP S A C +LLA                                              
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLA----------------------------------------------

Query:  --------------------NLSQISVT--------DLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI---------GCGILTSIVLPYN
                            +LS+ S+T        +LK  S+LD+S N+LN  I +E GG V L +L+L+ N +          C  L S++L +N
Subjt:  --------------------NLSQISVT--------DLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFI---------GCGILTSIVLPYN

AT5G25910.1 receptor like protein 523.1e-1036.89Show/hide
Query:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN-
        +N+  T+DFSGN F G IP ++G L+ L +LNLS+NGFT  +P S       + NL ++          LD+S+N+L+  I  E+G +  L  +   +N 
Subjt:  MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDEN-

Query:  FIG
        F+G
Subjt:  FIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGCCTCAAAACTCTTGACTTCTCTGGGAACAATTTTGTTGGTCACATTCCAACTACAATGGGGAATCTTCAATATCTTAAACTATTGAATCTCTCTTCA
AATGGCTTTACTGATAGCCTTCCAGAGTCTGTGGCGAAATGCTATAGCCTTTTGGCCAATTTAAGTCAAATTTCAGTCACGGATCTGAAAGCTTCGAGCATTCTT
GATTTGAGTAGAAATCGGCTGAATGAGAGCATTCTCAAGGAAATTGGAGGAGTCGTGCCTCTAATGAAGCTGAAGCTGGATGAAAATTTTATAGGGTGTGGAATT
CTCACTTCAATTGTTCTTCCCTACAACTTTGTAAGCTTCATTTCCTTGTTTTCCTCTATACTTTTGATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGCCTCAAAACTCTTGACTTCTCTGGGAACAATTTTGTTGGTCACATTCCAACTACAATGGGGAATCTTCAATATCTTAAACTATTGAATCTCTCTTCA
AATGGCTTTACTGATAGCCTTCCAGAGTCTGTGGCGAAATGCTATAGCCTTTTGGCCAATTTAAGTCAAATTTCAGTCACGGATCTGAAAGCTTCGAGCATTCTT
GATTTGAGTAGAAATCGGCTGAATGAGAGCATTCTCAAGGAAATTGGAGGAGTCGTGCCTCTAATGAAGCTGAAGCTGGATGAAAATTTTATAGGGTGTGGAATT
CTCACTTCAATTGTTCTTCCCTACAACTTTGTAAGCTTCATTTCCTTGTTTTCCTCTATACTTTTGATTGTTTAA
Protein sequenceShow/hide protein sequence
MNSLKTLDFSGNNFVGHIPTTMGNLQYLKLLNLSSNGFTDSLPESVAKCYSLLANLSQISVTDLKASSILDLSRNRLNESILKEIGGVVPLMKLKLDENFIGCGI
LTSIVLPYNFVSFISLFSSILLIV