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MS024667 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024667
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionR3h domain containing protein
Genome locationscaffold92:403744..406087
RNA-Seq ExpressionMS024667
SyntenyMS024667
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2669445.1 hypothetical protein I3760_14G034900 [Carya illinoinensis]3.5e-1150Show/hide
Query:  LPGFSESSRAILD-----ALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        + G  ES   +LD     +LGISK+EEK + G++D+NS  GLI+ STSS    R   EKE +GR KPNS+VAI  DREVD KD DY  S  R     D
Subjt:  LPGFSESSRAILD-----ALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

KAG2669446.1 hypothetical protein I3760_14G034900 [Carya illinoinensis]3.5e-1150Show/hide
Query:  LPGFSESSRAILD-----ALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        + G  ES   +LD     +LGISK+EEK + G++D+NS  GLI+ STSS    R   EKE +GR KPNS+VAI  DREVD KD DY  S  R     D
Subjt:  LPGFSESSRAILD-----ALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

KAG6573881.1 R3H domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1163.64Show/hide
Query:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGR-HKPNSRVAILMDREVDCKDLDYGMSCVRNY
        +LG +KVEEKMISGV D N SRGLI+ STS    SRS  +KEL  R HKPNSRVAI  DRE+D KD DY     RNY
Subjt:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGR-HKPNSRVAILMDREVDCKDLDYGMSCVRNY

XP_022150546.1 R3H domain-containing protein 2-like [Momordica charantia]6.3e-1361.25Show/hide
Query:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        ALG SK EEK+ISGVSD N SRGLI+ STS    SRS  +KE+  RHKPNSRVAI  DRE+D KD DY  S  R     D
Subjt:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

XP_023541781.1 R3H domain-containing protein 1-like [Cucurbita pepo subsp. pepo]4.5e-1163.64Show/hide
Query:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGR-HKPNSRVAILMDREVDCKDLDYGMSCVRNY
        +LG +KVEEKMISGV D N SRGLI+ STS    SRS  +KEL  R HKPNSRVAI  DRE+D KD DY     RNY
Subjt:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGR-HKPNSRVAILMDREVDCKDLDYGMSCVRNY

TrEMBL top hitse value%identityAlignment
A0A061FPB8 Single-stranded nucleic acid binding R3H protein isoform 22.9e-1160.26Show/hide
Query:  GISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        G+ K+EEK +S VSDINSSRGLIE STSS    RS  EKE +GR KPN+RVAI  DRE D KD DY  S  R     D
Subjt:  GISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

A0A2N9GJN3 Uncharacterized protein2.2e-1147.92Show/hide
Query:  PRILPGFSESSRAILDALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        P   P   +SS+ +  +L I K+EE  +SG+SD+NS RGL++ S+SS    RS  EKE +GR+KPN+RVAI  DRE+D KD DY  S  R     D
Subjt:  PRILPGFSESSRAILDALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

A0A2N9J7X2 Uncharacterized protein2.2e-1147.92Show/hide
Query:  PRILPGFSESSRAILDALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        P   P   +SS+ +  +L I K+EE  +SG+SD+NS RGL++ S+SS    RS  EKE +GR+KPN+RVAI  DRE+D KD DY  S  R     D
Subjt:  PRILPGFSESSRAILDALGISKVEEKMISGVSDINSSRGLIEYSTSS----RSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

A0A6J1DB08 R3H domain-containing protein 2-like3.1e-1361.25Show/hide
Query:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD
        ALG SK EEK+ISGVSD N SRGLI+ STS    SRS  +KE+  RHKPNSRVAI  DRE+D KD DY  S  R     D
Subjt:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLD

A0A6J1HWM6 R3H domain-containing protein 1-like2.2e-1163.64Show/hide
Query:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGR-HKPNSRVAILMDREVDCKDLDYGMSCVRNY
        +LG +KVEEKMISGV D N SRGLI+ STS    SRS  +KEL  R HKPNSRVAI  DRE+D KD DY     RNY
Subjt:  ALGISKVEEKMISGVSDINSSRGLIEYSTS----SRSGNEKELLGR-HKPNSRVAILMDREVDCKDLDYGMSCVRNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCTTTTGCTGCATGGAGCTTGGAGTTCTAGTCTTTCTTCTTACCATGGAGGCCTCTGCAGCAGAGGATCTCGAAGGTCCTGAGTCATGGGAGGTCGCTGACAT
GGTTGAGGCCATGAGACGAATGGCGTTGCGCTCCCTGCTTATTCTTCATCTTCATTTTCTCTTGACAATGAATCCGAGGATTCTACCAGGCTTTTCAGAGTCATCGCGAG
CGATTCTCGATGCTTTAGGCATTTCAAAGGTTGAAGAGAAGATGATTTCTGGAGTTTCTGATATAAATTCTAGCAGGGGTTTGATTGAATATTCAACTAGTAGTAGAAGC
GGGAATGAAAAGGAACTGCTTGGTAGACACAAACCAAATAGTAGGGTAGCTATTCTTATGGATCGTGAGGTTGATTGCAAAGATCTTGATTATGGCATGAGCTGTGTAAG
GAATTACCACAACTTGGATCTGTCCCGTCTTCTGGATCTCATCCTCCGGAGACAGGTTAAAGTACAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCTTTTGCTGCATGGAGCTTGGAGTTCTAGTCTTTCTTCTTACCATGGAGGCCTCTGCAGCAGAGGATCTCGAAGGTCCTGAGTCATGGGAGGTCGCTGACAT
GGTTGAGGCCATGAGACGAATGGCGTTGCGCTCCCTGCTTATTCTTCATCTTCATTTTCTCTTGACAATGAATCCGAGGATTCTACCAGGCTTTTCAGAGTCATCGCGAG
CGATTCTCGATGCTTTAGGCATTTCAAAGGTTGAAGAGAAGATGATTTCTGGAGTTTCTGATATAAATTCTAGCAGGGGTTTGATTGAATATTCAACTAGTAGTAGAAGC
GGGAATGAAAAGGAACTGCTTGGTAGACACAAACCAAATAGTAGGGTAGCTATTCTTATGGATCGTGAGGTTGATTGCAAAGATCTTGATTATGGCATGAGCTGTGTAAG
GAATTACCACAACTTGGATCTGTCCCGTCTTCTGGATCTCATCCTCCGGAGACAGGTTAAAGTACAAGTTTAG
Protein sequenceShow/hide protein sequence
MPRFCCMELGVLVFLLTMEASAAEDLEGPESWEVADMVEAMRRMALRSLLILHLHFLLTMNPRILPGFSESSRAILDALGISKVEEKMISGVSDINSSRGLIEYSTSSRS
GNEKELLGRHKPNSRVAILMDREVDCKDLDYGMSCVRNYHNLDLSRLLDLILRRQVKVQV