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MS024706 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024706
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionconserved peptide upstream open reading frame 53
Genome locationscaffold262:157154..157518
RNA-Seq ExpressionMS024706
SyntenyMS024706
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2664121.1 hypothetical protein I3760_16G064500 [Carya illinoinensis]2.5e-1865.91Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQIACL--ALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSAGFDL +IGALLKL + S++  + L     CCM+LC F+Q LNL + SVSMRLRPKRTCSGVKCFGA H+KRF F L LF RGG T
Subjt:  MSAGFDLAVIGALLKLSVSSSSQIACL--ALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

KAG6579195.1 hypothetical protein SDJN03_23643, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2781.61Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRF-SFLLLLFRRGGFT
        MSAGFDLAVIGALL+L  SSSS  + L L CCMILCCF+QSLNL FPSVSMR RPKRTCSGVKCFGA H+KRF SF+LLLFRRGGFT
Subjt:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRF-SFLLLLFRRGGFT

KAG6672509.1 hypothetical protein I3842_16G060900 [Carya illinoinensis]5.6e-1865.91Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQIACL--ALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSAGFDL +IGALLKL + S +  + L     CCM+LC F+Q LNL + SVSMRLRPKRTCSGVKCFGA H+KRF F L LF RGG T
Subjt:  MSAGFDLAVIGALLKLSVSSSSQIACL--ALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

KGN45959.1 hypothetical protein Csa_005610 [Cucumis sativus]2.1e-2072.09Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSAGFDLAVIGALL+L  SS            +IL  F+QSLNL F SVSMRLRPKRTCSGVKCFGA H+KRFSFLLLLFR+GGFT
Subjt:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

OAY31310.1 hypothetical protein MANES_14G101800v8 [Manihot esculenta]3.3e-1862.92Show/hide
Query:  MSAGFDLAVIGALLKLSV---SSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSA FDLA+IGALLKL     +SS+   C    C M+LCCFQQSL+LGFP++SMRLR KRTCSGV+CFG  H+KRF F L L+ RG  T
Subjt:  MSAGFDLAVIGALLKLSV---SSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

TrEMBL top hitse value%identityAlignment
A0A0A0KAV1 Uncharacterized protein1.0e-2072.09Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSAGFDLAVIGALL+L  SS            +IL  F+QSLNL F SVSMRLRPKRTCSGVKCFGA H+KRFSFLLLLFR+GGFT
Subjt:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

A0A2C9UKK3 Uncharacterized protein1.6e-1862.92Show/hide
Query:  MSAGFDLAVIGALLKLSV---SSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSA FDLA+IGALLKL     +SS+   C    C M+LCCFQQSL+LGFP++SMRLR KRTCSGV+CFG  H+KRF F L L+ RG  T
Subjt:  MSAGFDLAVIGALLKLSV---SSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

A0A2H5P3Q3 Uncharacterized protein3.9e-1762.5Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQ--IACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSA FDLA+IGA LKL +SSSS   +  +++  CM+LC F+QSLNLG  SVSMRLR KRTC GVKCFG  H+K+  F L LF RG FT
Subjt:  MSAGFDLAVIGALLKLSVSSSSQ--IACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

A0A314XMT5 Uncharacterized protein2.2e-1561.63Show/hide
Query:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSA F LAVIGALLKL + +SS  +     C M+LCCF Q LN    SVSM LRPKRTCSG++ FGA H+KRFSF L LF RG  T
Subjt:  MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

A0A6J5TMY7 Uncharacterized protein4.8e-1565.52Show/hide
Query:  MSAGFDLAVIGALLKLSV-SSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT
        MSA F LAVIGALLKL + +SSS  ACLA+ C M+LC F+Q LN    SVSM LRPKRTCSG++ FGA H+KRFSF L LF RG  T
Subjt:  MSAGFDLAVIGALLKLSV-SSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25472.1 conserved peptide upstream open reading frame 541.7e-0442.86Show/hide
Query:  LAVIGALLKLSVSSSSQIACLALCCCMIL----CCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKR
        L +I   ++ S SSSS +    L    +L     C +Q L L  PS+SM LR KRTCSGV+ FG  H K+
Subjt:  LAVIGALLKLSVSSSSQIACLALCCCMIL----CCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKR

AT1G68552.1 conserved peptide upstream open reading frame 531.2e-1047.67Show/hide
Query:  MSAGFDLAVIGALLKLS--VSSSSQIACLALCCCMI----LCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVK--RFSFLLL
        MSAGF+  VI +L+ +S  +SSSS  +  +L  C++     CC +Q L L  PS+SMRLRPKRTCS V+ FG  H+K  +FSF ++
Subjt:  MSAGFDLAVIGALLKLS--VSSSSQIACLALCCCMI----LCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVK--RFSFLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGAAGCTCTCTGTTTCTTCTTCTTCTCAAATCGCTTGCTTGGCTCTCTGTTGCTGTATGATTCTCTGCTG
TTTCCAGCAGAGTCTGAATCTGGGGTTCCCATCTGTTTCGATGCGTTTGAGACCCAAGAGGACTTGTTCTGGAGTGAAGTGCTTTGGAGCTTCTCATGTAAAACGATTCT
CATTCCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGAAGCTCTCTGTTTCTTCTTCTTCTCAAATCGCTTGCTTGGCTCTCTGTTGCTGTATGATTCTCTGCTG
TTTCCAGCAGAGTCTGAATCTGGGGTTCCCATCTGTTTCGATGCGTTTGAGACCCAAGAGGACTTGTTCTGGAGTGAAGTGCTTTGGAGCTTCTCATGTAAAACGATTCT
CATTCCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACCTGA
Protein sequenceShow/hide protein sequence
MSAGFDLAVIGALLKLSVSSSSQIACLALCCCMILCCFQQSLNLGFPSVSMRLRPKRTCSGVKCFGASHVKRFSFLLLLFRRGGFT