; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024721 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024721
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold622:82597..82947
RNA-Seq ExpressionMS024721
SyntenyMS024721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH05705.1 TatD related DNase [Prunus dulcis]1.9e-1638.53Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+ L    E  +LNL +++  +  +SGMKIN AKS +  +N   + L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

BBN68784.1 TatD related DNase [Prunus dulcis]2.4e-1638.53Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+      E  +LNL +M+  +  +SGMKIN AKS +  +N   + L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

BBN69274.1 TatD related DNase [Prunus dulcis]2.4e-1638.53Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+      E  +LNL +M+  +  +SGMKIN AKS +  +N   + L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]2.4e-1638.53Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+      E  +LNL +M+  +  +SGMKIN AKS +  +N   + L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]4.9e-1741.12Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++EK      ++GL +G   ++I+HLQFADDT+   A++E  + NL E++  +  ISG+KIN AK  +A +N   + L+ +AD WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGK
         + +GG+
Subjt:  EMQVGGK

TrEMBL top hitse value%identityAlignment
M5VS59 Reverse transcriptase domain-containing protein (Fragment)6.9e-1738.53Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+ L    E  +LNL +++  +  +SGMKIN AKS +  +N   + L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)2.4e-1739.45Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+ L    E  +LNL +++  +  +SGMKIN AKS +  +N   D L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)1.4e-1739.45Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+ L    E  +LNL +++  + ++SGMKIN AKS +  +N   D L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)6.9e-1738.53Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+ L    E  +LNL +++  +  +SGMKIN AKS +  +N   + L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)1.4e-1739.45Show/hide
Query:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL
        +SR++E+      + G++ G+  ++++HLQFADDT+ L    E  +LNL +++  + ++SGMKIN AKS +  +N   D L N+A  WGC+ G WP+ YL
Subjt:  MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYL

Query:  EMQVGGKHR
         + +GG  R
Subjt:  EMQVGGKHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGAATGTTGGAAAAAGGCTCTAGAGAAGGCTGGTTGGAAGGGCTAATAGTAGGGAACAGCGACCTTCAAATCAACCACCTTCAATTCGCTGATGATACACTAAT
TCTTTCAGCTGATAATGAGGTTTGTTTTCTGAATCTTAAAGAGATGGTTTGCTGTTATGATAAGATCTCCGGCATGAAGATCAATTTAGCAAAATCGATGGTGGCGGAGT
TGAATGTGGGTGGTGATGATTTGCAGAACTTAGCAGACAGATGGGGTTGCAAGGCTGGTCCATGGCCTTTACCTTATCTGGAAATGCAAGTGGGGGGAAAGCATAGAAAG
CAGCTTTCTGGGAACCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGAATGTTGGAAAAAGGCTCTAGAGAAGGCTGGTTGGAAGGGCTAATAGTAGGGAACAGCGACCTTCAAATCAACCACCTTCAATTCGCTGATGATACACTAAT
TCTTTCAGCTGATAATGAGGTTTGTTTTCTGAATCTTAAAGAGATGGTTTGCTGTTATGATAAGATCTCCGGCATGAAGATCAATTTAGCAAAATCGATGGTGGCGGAGT
TGAATGTGGGTGGTGATGATTTGCAGAACTTAGCAGACAGATGGGGTTGCAAGGCTGGTCCATGGCCTTTACCTTATCTGGAAATGCAAGTGGGGGGAAAGCATAGAAAG
CAGCTTTCTGGGAACCAATAG
Protein sequenceShow/hide protein sequence
MSRMLEKGSREGWLEGLIVGNSDLQINHLQFADDTLILSADNEVCFLNLKEMVCCYDKISGMKINLAKSMVAELNVGGDDLQNLADRWGCKAGPWPLPYLEMQVGGKHRK
QLSGNQ