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MS024804 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024804
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNase H domain-containing protein
Genome locationscaffold741:186936..187229
RNA-Seq ExpressionMS024804
SyntenyMS024804
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]1.1e-0646.38Show/hide
Query:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRAL
        ME GI PI LE DS RI+NLF +  E +S+ G I+  V+  L  +   S+ FT+R GN   H + RRAL
Subjt:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRAL

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]7.0e-1751.06Show/hide
Query:  GIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL
        G+ P+ LE DS RIFNLF Q +ED+SE GEIV+  +         SF F +REGN+A H + RRA LLRE  IW+E WP E  S   +ECL+ L
Subjt:  GIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.6e-0847.22Show/hide
Query:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL
        ED+SE GEIV+  +         SF F +REGN+A H + RRA LL E  IW+E WP E  S   +ECL+ L
Subjt:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]4.6e-0841.49Show/hide
Query:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC
        +EAG    Q+E DS RIFNL      D SEVG +  +++  L   A   SF FT R GN   H + + AL      IW+E WP E  SV A++C
Subjt:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC

TrEMBL top hitse value%identityAlignment
A0A6J1CDQ4 uncharacterized protein LOC1110105335.4e-0746.38Show/hide
Query:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRAL
        ME GI PI LE DS RI+NLF +  E +S+ G I+  V+  L  +   S+ FT+R GN   H + RRAL
Subjt:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRAL

A0A6J1CIF1 uncharacterized protein LOC1110112373.4e-1751.06Show/hide
Query:  GIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL
        G+ P+ LE DS RIFNLF Q +ED+SE GEIV+  +         SF F +REGN+A H + RRA LLRE  IW+E WP E  S   +ECL+ L
Subjt:  GIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL

A0A6J1DAR4 uncharacterized protein LOC1110189547.6e-0947.22Show/hide
Query:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL
        ED+SE GEIV+  +         SF F +REGN+A H + RRA LL E  IW+E WP E  S   +ECL+ L
Subjt:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL

A0A6J1DBJ7 uncharacterized protein LOC1110189732.2e-0841.49Show/hide
Query:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC
        +EAG    Q+E DS RIFNL      D SEVG +  +++  L   A   SF FT R GN   H + + AL      IW+E WP E  SV A++C
Subjt:  MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC

A0A7N2L9Q3 RNase H domain-containing protein1.9e-0429.9Show/hide
Query:  EAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRALL-RESHIWLEGWPTEFHSVFALECLDTLS
        E  I+ + +E D  R+     +Q   ++  G +V   R L     L SF   +REGN+  H + RRA+L  +  +W+E  P +  +VF  +C   +S
Subjt:  EAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRALL-RESHIWLEGWPTEFHSVFALECLDTLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAGGTATCTACCCGATTCAATTGGAATTAGATTCTTGGCGCATCTTCAACCTGTTCCGACAGCAAACGGAGGATGTTTCAGAGGTGGGAGAAATTGTGGTGAT
GGTGAGAGGGCTGCTACCTGTTAAAGCGTTGGGCTCGTTCCTGTTCACCAGAAGAGAGGGGAACGAAGCCACACACGGTATGGTGAGGAGAGCTCTTCTTCGAGAAAGCC
ATATCTGGTTGGAGGGATGGCCGACGGAATTCCATTCTGTTTTTGCTTTGGAATGTTTGGATACTCTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAGGTATCTACCCGATTCAATTGGAATTAGATTCTTGGCGCATCTTCAACCTGTTCCGACAGCAAACGGAGGATGTTTCAGAGGTGGGAGAAATTGTGGTGAT
GGTGAGAGGGCTGCTACCTGTTAAAGCGTTGGGCTCGTTCCTGTTCACCAGAAGAGAGGGGAACGAAGCCACACACGGTATGGTGAGGAGAGCTCTTCTTCGAGAAAGCC
ATATCTGGTTGGAGGGATGGCCGACGGAATTCCATTCTGTTTTTGCTTTGGAATGTTTGGATACTCTTTCTTAA
Protein sequenceShow/hide protein sequence
MEAGIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRALLRESHIWLEGWPTEFHSVFALECLDTLS