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MS024863 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024863
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein M17-like isoform X1
Genome locationscaffold176:1497036..1498080
RNA-Seq ExpressionMS024863
SyntenyMS024863
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140307.1 uncharacterized protein LOC111011010 isoform X1 [Momordica charantia]7.1e-1967.74Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDR---RCVRCCRGPAEKEATIQNQNGFNSQNTVEESE
        MRS AV F CLLFISTVVIASAVSEGTQEQ+EVEVEN N +EESKQRC  G C   +R   RCVRCC    E EAT QNQN   ++N+VEES+
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDR---RCVRCCRGPAEKEATIQNQNGFNSQNTVEESE

XP_022140567.1 late embryogenesis abundant protein M17-like isoform X1 [Momordica charantia]1.2e-4794.17Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGG
        MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFD RRCVRCCRGPAE+EATIQNQN    +NTVEESEVETNGFGKGG
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGG

Query:  GKGGKGVGGKGGGKGGKGGK
        GKGGKGVGGKGGGKGGKGGK
Subjt:  GKGGKGVGGKGGGKGGKGGK

XP_022140569.1 late embryogenesis abundant protein M17-like isoform X2 [Momordica charantia]8.6e-4167.26Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC
        MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE                                                VENENPVEESKQRCRYGC
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC

Query:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK
        CRFD RRCVRCCRGPAE+EATIQNQN    +NTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK
Subjt:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK

XP_022140570.1 late embryogenesis abundant protein M17-like isoform X3 [Momordica charantia]3.7e-3664.29Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC
        MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE                                                VENENPVEESKQRCRYGC
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC

Query:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKG
        CRFD RRCVRCCRGPAE+EATIQNQN    +NTVEESEVETNGFGKGGGKGGKG
Subjt:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKG

XP_022140624.1 late embryogenesis abundant protein M17-like [Momordica charantia]1.9e-2756.89Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQ---------NEVE--------------------------------------VENENPVEESKQRCRYGCC
        M SK + F CLLF+S +VIAS V+EGTQEQ         N VE                                      VENENPVEESKQRCRYGCC
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQ---------NEVE--------------------------------------VENENPVEESKQRCRYGCC

Query:  RFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK
        RFD RRCVRCCRGPAE EAT+QNQN    +NTVEESEVETNG   GGGKGG G GGKGG KGGKGGK
Subjt:  RFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK

TrEMBL top hitse value%identityAlignment
A0A6J1CFE1 late embryogenesis abundant protein M17-like isoform X31.8e-3664.29Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC
        MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE                                                VENENPVEESKQRCRYGC
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC

Query:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKG
        CRFD RRCVRCCRGPAE+EATIQNQN    +NTVEESEVETNGFGKGGGKGGKG
Subjt:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKG

A0A6J1CG20 late embryogenesis abundant protein M17-like isoform X24.2e-4167.26Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC
        MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE                                                VENENPVEESKQRCRYGC
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVE------------------------------------------------VENENPVEESKQRCRYGC

Query:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK
        CRFD RRCVRCCRGPAE+EATIQNQN    +NTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK
Subjt:  CRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK

A0A6J1CG70 late embryogenesis abundant protein M17-like9.0e-2856.89Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQ---------NEVE--------------------------------------VENENPVEESKQRCRYGCC
        M SK + F CLLF+S +VIAS V+EGTQEQ         N VE                                      VENENPVEESKQRCRYGCC
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQ---------NEVE--------------------------------------VENENPVEESKQRCRYGCC

Query:  RFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK
        RFD RRCVRCCRGPAE EAT+QNQN    +NTVEESEVETNG   GGGKGG G GGKGG KGGKGGK
Subjt:  RFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGKGGGKGGKGGK

A0A6J1CGG8 uncharacterized protein LOC111011010 isoform X13.4e-1967.74Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDR---RCVRCCRGPAEKEATIQNQNGFNSQNTVEESE
        MRS AV F CLLFISTVVIASAVSEGTQEQ+EVEVEN N +EESKQRC  G C   +R   RCVRCC    E EAT QNQN   ++N+VEES+
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDR---RCVRCCRGPAEKEATIQNQNGFNSQNTVEESE

A0A6J1CHC2 late embryogenesis abundant protein M17-like isoform X16.0e-4894.17Show/hide
Query:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGG
        MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFD RRCVRCCRGPAE+EATIQNQN    +NTVEESEVETNGFGKGG
Subjt:  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGG

Query:  GKGGKGVGGKGGGKGGKGGK
        GKGGKGVGGKGGGKGGKGGK
Subjt:  GKGGKGVGGKGGGKGGKGGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCAAGGCTGTTGCGTTTGTTTGTCTGTTATTTATCTCTACTGTTGTTATTGCATCGGCAGTGTCTGAAGGAACTCAAGAGCAGAATGAGGTTGAAGTCGAAAA
TGAAAATCCAGTAGAAGAATCAAAGCAACGTTGTCGATACGGATGTTGCCGCTTTGATGATCGTCGTTGCGTTAGATGCTGTCGTGGTCCTGCAGAAAAAGAGGCCACCA
TCCAAAACCAAAATGGTTTCAACTCTCAGAACACAGTAGAAGAGAGTGAAGTGGAGACGAACGGATTCGGAAAGGGAGGAGGCAAAGGCGGGAAAGGAGTCGGCGGAAAG
GGAGGAGGCAAAGGCGGAAAAGGAGGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCAAGGCTGTTGCGTTTGTTTGTCTGTTATTTATCTCTACTGTTGTTATTGCATCGGCAGTGTCTGAAGGAACTCAAGAGCAGAATGAGGTTGAAGTCGAAAA
TGAAAATCCAGTAGAAGAATCAAAGCAACGTTGTCGATACGGATGTTGCCGCTTTGATGATCGTCGTTGCGTTAGATGCTGTCGTGGTCCTGCAGAAAAAGAGGCCACCA
TCCAAAACCAAAATGGTTTCAACTCTCAGAACACAGTAGAAGAGAGTGAAGTGGAGACGAACGGATTCGGAAAGGGAGGAGGCAAAGGCGGGAAAGGAGTCGGCGGAAAG
GGAGGAGGCAAAGGCGGAAAAGGAGGGAAGTGA
Protein sequenceShow/hide protein sequence
MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDDRRCVRCCRGPAEKEATIQNQNGFNSQNTVEESEVETNGFGKGGGKGGKGVGGK
GGGKGGKGGK