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MS024864 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024864
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein M17-like
Genome locationscaffold176:1505055..1506186
RNA-Seq ExpressionMS024864
SyntenyMS024864
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140567.1 late embryogenesis abundant protein M17-like isoform X1 [Momordica charantia]1.1e-0445.69Show/hide
Query:  MTSKTILFACLLFVSAIVIASVVAEGTQEQH----------------------------------------GTVE---ENTVEESEVETNGL-IGGGKGG
        M SK + F CLLF+S +VIAS V+EGTQEQ+                                         T++   ENTVEESEVETNG   GGGKGG
Subjt:  MTSKTILFACLLFVSAIVIASVVAEGTQEQH----------------------------------------GTVE---ENTVEESEVETNGL-IGGGKGG

Query:  -GKGGKGGHKGGKGGK
         G GGKGG KGGKGGK
Subjt:  -GKGGKGGHKGGKGGK
XP_022140624.1 late embryogenesis abundant protein M17-like [Momordica charantia]2.8e-1345.18Show/hide
Query:  MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVE-----------------------------------------------------------------
        MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVE                                                                 
Subjt:  MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVE-----------------------------------------------------------------

Query:  -------------------------ENTVEESEVETNGLIGGGKGGGKGGKGGHKGGKGGKGKGGK
                                 ENTVEESEVETNGLIGGGKGGGKGGKGG+KGGKGGKGKGGK
Subjt:  -------------------------ENTVEESEVETNGLIGGGKGGGKGGKGGHKGGKGGKGKGGK
TrEMBL top hitse value%identityAlignment
A0A6J1CG70 late embryogenesis abundant protein M17-like1.4e-1345.18Show/hide
Query:  MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVE-----------------------------------------------------------------
        MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVE                                                                 
Subjt:  MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVE-----------------------------------------------------------------

Query:  -------------------------ENTVEESEVETNGLIGGGKGGGKGGKGGHKGGKGGKGKGGK
                                 ENTVEESEVETNGLIGGGKGGGKGGKGG+KGGKGGKGKGGK
Subjt:  -------------------------ENTVEESEVETNGLIGGGKGGGKGGKGGHKGGKGGKGKGGK
A0A6J1CHC2 late embryogenesis abundant protein M17-like isoform X15.2e-0545.69Show/hide
Query:  MTSKTILFACLLFVSAIVIASVVAEGTQEQH----------------------------------------GTVE---ENTVEESEVETNGL-IGGGKGG
        M SK + F CLLF+S +VIAS V+EGTQEQ+                                         T++   ENTVEESEVETNG   GGGKGG
Subjt:  MTSKTILFACLLFVSAIVIASVVAEGTQEQH----------------------------------------GTVE---ENTVEESEVETNGL-IGGGKGG

Query:  -GKGGKGGHKGGKGGK
         G GGKGG KGGKGGK
Subjt:  -GKGGKGGHKGGKGGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCCAAAACTATTTTATTTGCGTGTCTGTTGTTTGTCTCTGCTATTGTTATTGCGTCAGTGGTGGCCGAAGGAACTCAAGAGCAGCATGGGACAGTTGAAGAGAA
CACAGTAGAAGAGAGTGAAGTGGAGACGAACGGATTGATAGGCGGCGGAAAGGGAGGAGGCAAAGGTGGCAAAGGAGGTCATAAAGGCGGGAAAGGAGGCAAAGGGAAAG
GTGGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCCAAAACTATTTTATTTGCGTGTCTGTTGTTTGTCTCTGCTATTGTTATTGCGTCAGTGGTGGCCGAAGGAACTCAAGAGCAGCATGGGACAGTTGAAGAGAA
CACAGTAGAAGAGAGTGAAGTGGAGACGAACGGATTGATAGGCGGCGGAAAGGGAGGAGGCAAAGGTGGCAAAGGAGGTCATAAAGGCGGGAAAGGAGGCAAAGGGAAAG
GTGGGAAGTGA
Protein sequenceShow/hide protein sequence
MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVEENTVEESEVETNGLIGGGKGGGKGGKGGHKGGKGGKGKGGK