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MS024865 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024865
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein M17-like isoform X1
Genome locationscaffold176:1514683..1516814
RNA-Seq ExpressionMS024865
SyntenyMS024865
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140307.1 uncharacterized protein LOC111011010 isoform X1 [Momordica charantia]1.5e-09100Show/hide
Query:  EIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD
        EIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD
Subjt:  EIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD

XP_022140307.1 uncharacterized protein LOC111011010 isoform X1 [Momordica charantia]3.4e-0684.44Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK
        MRS AVVFGCLLFIS VVIASAVSEGTQEQHEVE E G  +EESK
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK

XP_022140307.1 uncharacterized protein LOC111011010 isoform X1 [Momordica charantia]4.3e-0934.72Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE------------------------------------------------------------------
        MRS AVVFGCLLFIS VVIASAVSEGTQEQHEVE                                                                  
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE------------------------------------------------------------------

Query:  -------------------------------------------------------------------------EIGVEESKVETNGRIKGGKGGKGGEGK
                                                                                 EIGVEESKVETNGRIKGGKGGKGGEGK
Subjt:  -------------------------------------------------------------------------EIGVEESKVETNGRIKGGKGGKGGEGK

Query:  GNDGGKGGKGHANGGD
        GNDGGKGGKGHANGGD
Subjt:  GNDGGKGGKGHANGGD

XP_022140567.1 late embryogenesis abundant protein M17-like isoform X1 [Momordica charantia]3.7e-0550Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE--------------------------------------------EIGVEESKVETNGRIK-GGKGG
        MRSKAV F CLLFIS VVIASAVSEGTQEQ+EVE                                            E  VEES+VETNG  K GGKGG
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE--------------------------------------------EIGVEESKVETNGRIK-GGKGG

Query:  KGGEGKGNDGGKGGKG
        KG  GKG  GGKGGKG
Subjt:  KGGEGKGNDGGKGGKG

XP_022140569.1 late embryogenesis abundant protein M17-like isoform X2 [Momordica charantia]3.2e-0477.78Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK
        MRSKAV F CLLFIS VVIASAVSEGTQEQ+EVE E G  +E+SK
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK

XP_022140570.1 late embryogenesis abundant protein M17-like isoform X3 [Momordica charantia]3.2e-0477.78Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK
        MRSKAV F CLLFIS VVIASAVSEGTQEQ+EVE E G  +E+SK
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK

TrEMBL top hitse value%identityAlignment
A0A6J1CFE1 late embryogenesis abundant protein M17-like isoform X31.5e-0477.78Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK
        MRSKAV F CLLFIS VVIASAVSEGTQEQ+EVE E G  +E+SK
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK

A0A6J1CG20 late embryogenesis abundant protein M17-like isoform X21.5e-0477.78Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK
        MRSKAV F CLLFIS VVIASAVSEGTQEQ+EVE E G  +E+SK
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK

A0A6J1CGG8 uncharacterized protein LOC111011010 isoform X17.1e-10100Show/hide
Query:  EIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD
        EIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD
Subjt:  EIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD

A0A6J1CGG8 uncharacterized protein LOC111011010 isoform X11.6e-0684.44Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK
        MRS AVVFGCLLFIS VVIASAVSEGTQEQHEVE E G  +EESK
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE-EIG--VEESK

A0A6J1CGG8 uncharacterized protein LOC111011010 isoform X12.1e-0934.72Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE------------------------------------------------------------------
        MRS AVVFGCLLFIS VVIASAVSEGTQEQHEVE                                                                  
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE------------------------------------------------------------------

Query:  -------------------------------------------------------------------------EIGVEESKVETNGRIKGGKGGKGGEGK
                                                                                 EIGVEESKVETNGRIKGGKGGKGGEGK
Subjt:  -------------------------------------------------------------------------EIGVEESKVETNGRIKGGKGGKGGEGK

Query:  GNDGGKGGKGHANGGD
        GNDGGKGGKGHANGGD
Subjt:  GNDGGKGGKGHANGGD

A0A6J1CHC2 late embryogenesis abundant protein M17-like isoform X11.8e-0550Show/hide
Query:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE--------------------------------------------EIGVEESKVETNGRIK-GGKGG
        MRSKAV F CLLFIS VVIASAVSEGTQEQ+EVE                                            E  VEES+VETNG  K GGKGG
Subjt:  MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVE--------------------------------------------EIGVEESKVETNGRIK-GGKGG

Query:  KGGEGKGNDGGKGGKG
        KG  GKG  GGKGGKG
Subjt:  KGGEGKGNDGGKGGKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCAAAGCTGTTGTGTTTGGTTGTCTCTTATTTATCTCTATTGTTGTTATTGCATCCGCAGTGTCTGAAGGAACTCAAGAGCAGCATGAGGTTGAAGAAATTGG
AGTAGAAGAGAGCAAAGTTGAGACAAACGGACGTATTAAAGGAGGCAAAGGAGGCAAAGGAGGAGAAGGCAAAGGGAATGATGGCGGCAAAGGTGGAAAAGGCCACGCTA
ATGGTGGAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCAAAGCTGTTGTGTTTGGTTGTCTCTTATTTATCTCTATTGTTGTTATTGCATCCGCAGTGTCTGAAGGAACTCAAGAGCAGCATGAGGTTGAAGAAATTGG
AGTAGAAGAGAGCAAAGTTGAGACAAACGGACGTATTAAAGGAGGCAAAGGAGGCAAAGGAGGAGAAGGCAAAGGGAATGATGGCGGCAAAGGTGGAAAAGGCCACGCTA
ATGGTGGAGACTGA
Protein sequenceShow/hide protein sequence
MRSKAVVFGCLLFISIVVIASAVSEGTQEQHEVEEIGVEESKVETNGRIKGGKGGKGGEGKGNDGGKGGKGHANGGD