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MS024866 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024866
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein M17-like
Genome locationscaffold176:1535476..1536572
RNA-Seq ExpressionMS024866
SyntenyMS024866
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140307.1 uncharacterized protein LOC111011010 isoform X1 [Momordica charantia]4.6e-2536.43Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP
        M S AVVF C LLF+STV IASAVS+GTQEQH  +EV+N NS E+ +  CP G CC    F G   C+RCC   E           +NENS+EE K  CP
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP

Query:  YG-CCGFDA-SHSCTRCCGL----------HEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCCGLRKVEKENPVEELKIHCPYGCCGFDASHSCTRCC
         G CC  +  +  C RCC               +NEN +EE K  CP G CC  +  +  C RCC  R  E E  V+   +                   
Subjt:  YG-CCGFDA-SHSCTRCCGL----------HEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCCGLRKVEKENPVEELKIHCPYGCCGFDASHSCTRCC

Query:  GLHEVEKETPVERLKIHCPYGCCSFDDHY--NCIRCCGLSAEEHAIIQNGFNLISHQNEANVEKGQRES
               E  +E  K  CP G C   + +   C+RCC    E  A  QN       +NE  VE+ + E+
Subjt:  GLHEVEKETPVERLKIHCPYGCCSFDDHY--NCIRCCGLSAEEHAIIQNGFNLISHQNEANVEKGQRES

XP_022140308.1 uncharacterized protein LOC111011010 isoform X2 [Momordica charantia]2.4e-1845.4Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP
        M S AVVF C LLF+STV IASAVS+GTQEQH  +EV+N NS E+ +  CP G CC    F G   C+RCC   E           +NENS+EE K  CP
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP

Query:  YG-CCGFDA-SHSCTRCC--------GLHEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCC
         G CC  +  +  C RCC         +     EN IEE K  CP G CC  +  +  C RCC
Subjt:  YG-CCGFDA-SHSCTRCC--------GLHEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCC

XP_022140309.1 uncharacterized protein LOC111011011 [Momordica charantia]1.1e-2638.38Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEAKNENSIEELKIHCPYGCCGFDASHSCT
        MTSK++VF+C LLFVS +   S V++ TQ+QH  +EV+N N  E+ +  C +GCCGF      CI CC    AK + +IE L +                
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEAKNENSIEELKIHCPYGCCGFDASHSCT

Query:  RCCGLHEAKNENPIEELKIHCPYGCCGF-DASHSCTRCCGLR-----------KVEKENPVEELKIHCPYGCCGF-DASHSCTRCCGLHEVEKETPVE
                +N NPIEE K  C +GCCGF   S  C  CC  R            VE  NPVEE K  C +GCCGF   S  C RCC     E    ++
Subjt:  RCCGLHEAKNENPIEELKIHCPYGCCGF-DASHSCTRCCGLR-----------KVEKENPVEELKIHCPYGCCGF-DASHSCTRCCGLHEVEKETPVE

XP_022140570.1 late embryogenesis abundant protein M17-like isoform X3 [Momordica charantia]1.7e-1643.88Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDGGHS--CIRCCGL------------HEAKNENSIEELKIHCP
        M SKAV F C LLF+STV IASAVS+GTQEQ N +EV++ NS E  +  C +GCC  +  H+  C+RCC                 +NEN +EE K  C 
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDGGHS--CIRCCGL------------HEAKNENSIEELKIHCP

Query:  YGCCGFDASHSCTRCC-------GLHEAKNENPIEELKI
        YGCC FD    C RCC          + +NEN +EE ++
Subjt:  YGCCGFDASHSCTRCC-------GLHEAKNENPIEELKI

XP_022140624.1 late embryogenesis abundant protein M17-like [Momordica charantia]1.2e-2044.85Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEA----------KNENSIEELKIHCPYGC
        MTSK ++F+C LLFVS + IAS V++GTQEQH T+EV+N NS E+ +  C +GCCGF      CI CC    A          +NEN +EE K  C YGC
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEA----------KNENSIEELKIHCPYGC

Query:  CGFDASHSCTRCC-------GLHEAKNENPIEELKI
        C FD    C RCC          + +NEN +EE ++
Subjt:  CGFDASHSCTRCC-------GLHEAKNENPIEELKI

TrEMBL top hitse value%identityAlignment
A0A6J1CFC0 uncharacterized protein LOC1110110115.2e-2738.38Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEAKNENSIEELKIHCPYGCCGFDASHSCT
        MTSK++VF+C LLFVS +   S V++ TQ+QH  +EV+N N  E+ +  C +GCCGF      CI CC    AK + +IE L +                
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEAKNENSIEELKIHCPYGCCGFDASHSCT

Query:  RCCGLHEAKNENPIEELKIHCPYGCCGF-DASHSCTRCCGLR-----------KVEKENPVEELKIHCPYGCCGF-DASHSCTRCCGLHEVEKETPVE
                +N NPIEE K  C +GCCGF   S  C  CC  R            VE  NPVEE K  C +GCCGF   S  C RCC     E    ++
Subjt:  RCCGLHEAKNENPIEELKIHCPYGCCGF-DASHSCTRCCGLR-----------KVEKENPVEELKIHCPYGCCGF-DASHSCTRCCGLHEVEKETPVE

A0A6J1CG20 late embryogenesis abundant protein M17-like isoform X28.4e-1743.88Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDGGHS--CIRCCGL------------HEAKNENSIEELKIHCP
        M SKAV F C LLF+STV IASAVS+GTQEQ N +EV++ NS E  +  C +GCC  +  H+  C+RCC                 +NEN +EE K  C 
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDGGHS--CIRCCGL------------HEAKNENSIEELKIHCP

Query:  YGCCGFDASHSCTRCC-------GLHEAKNENPIEELKI
        YGCC FD    C RCC          + +NEN +EE ++
Subjt:  YGCCGFDASHSCTRCC-------GLHEAKNENPIEELKI

A0A6J1CG70 late embryogenesis abundant protein M17-like5.6e-2144.85Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEA----------KNENSIEELKIHCPYGC
        MTSK ++F+C LLFVS + IAS V++GTQEQH T+EV+N NS E+ +  C +GCCGF      CI CC    A          +NEN +EE K  C YGC
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDG-GHSCIRCCGLHEA----------KNENSIEELKIHCPYGC

Query:  CGFDASHSCTRCC-------GLHEAKNENPIEELKI
        C FD    C RCC          + +NEN +EE ++
Subjt:  CGFDASHSCTRCC-------GLHEAKNENPIEELKI

A0A6J1CGG8 uncharacterized protein LOC111011010 isoform X12.2e-2536.43Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP
        M S AVVF C LLF+STV IASAVS+GTQEQH  +EV+N NS E+ +  CP G CC    F G   C+RCC   E           +NENS+EE K  CP
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP

Query:  YG-CCGFDA-SHSCTRCCGL----------HEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCCGLRKVEKENPVEELKIHCPYGCCGFDASHSCTRCC
         G CC  +  +  C RCC               +NEN +EE K  CP G CC  +  +  C RCC  R  E E  V+   +                   
Subjt:  YG-CCGFDA-SHSCTRCCGL----------HEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCCGLRKVEKENPVEELKIHCPYGCCGFDASHSCTRCC

Query:  GLHEVEKETPVERLKIHCPYGCCSFDDHY--NCIRCCGLSAEEHAIIQNGFNLISHQNEANVEKGQRES
               E  +E  K  CP G C   + +   C+RCC    E  A  QN       +NE  VE+ + E+
Subjt:  GLHEVEKETPVERLKIHCPYGCCSFDDHY--NCIRCCGLSAEEHAIIQNGFNLISHQNEANVEKGQRES

A0A6J1CHQ6 uncharacterized protein LOC111011010 isoform X21.2e-1845.4Show/hide
Query:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP
        M S AVVF C LLF+STV IASAVS+GTQEQH  +EV+N NS E+ +  CP G CC    F G   C+RCC   E           +NENS+EE K  CP
Subjt:  MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYG-CC---GFDGGHSCIRCCGLHE----------AKNENSIEELKIHCP

Query:  YG-CCGFDA-SHSCTRCC--------GLHEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCC
         G CC  +  +  C RCC         +     EN IEE K  CP G CC  +  +  C RCC
Subjt:  YG-CCGFDA-SHSCTRCC--------GLHEAKNENPIEELKIHCPYG-CCGFDA-SHSCTRCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCCAAAGCTGTTGTATTTTCGTGTTTGTTGTTGTTTGTCTCTACTGTAACAATTGCATCGGCAGTATCACAAGGAACTCAAGAACAGCACAACACAATTGAAGT
TGACAATGAAAATTCAGAAGAAAAGTTAAGGATTCATTGCCCCTATGGATGTTGCGGCTTTGATGGCGGTCATAGTTGCATAAGATGTTGTGGTCTTCATGAAGCTAAAA
ATGAAAATTCAATAGAAGAACTAAAGATTCACTGCCCCTACGGATGTTGCGGCTTTGATGCTAGTCATAGTTGCACTAGATGTTGTGGTCTTCACGAAGCCAAAAATGAA
AATCCAATAGAAGAACTAAAGATTCACTGCCCCTATGGGTGTTGCGGCTTCGATGCCAGTCATAGTTGCACTAGATGTTGTGGTCTTCGCAAGGTTGAAAAAGAAAATCC
AGTAGAAGAACTAAAGATTCATTGCCCCTATGGATGCTGCGGTTTTGATGCCAGTCATAGTTGCACCAGATGCTGTGGTCTTCACGAAGTTGAAAAAGAAACTCCAGTAG
AAAGATTAAAGATTCACTGCCCCTATGGATGTTGTAGCTTTGATGACCATTACAATTGCATCAGATGCTGTGGTCTTTCTGCAGAAGAGCATGCCATAATCCAAAATGGT
TTCAACTTGATCTCTCATCAAAATGAGGCAAATGTGGAAAAAGGGCAACGGGAAAGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCCAAAGCTGTTGTATTTTCGTGTTTGTTGTTGTTTGTCTCTACTGTAACAATTGCATCGGCAGTATCACAAGGAACTCAAGAACAGCACAACACAATTGAAGT
TGACAATGAAAATTCAGAAGAAAAGTTAAGGATTCATTGCCCCTATGGATGTTGCGGCTTTGATGGCGGTCATAGTTGCATAAGATGTTGTGGTCTTCATGAAGCTAAAA
ATGAAAATTCAATAGAAGAACTAAAGATTCACTGCCCCTACGGATGTTGCGGCTTTGATGCTAGTCATAGTTGCACTAGATGTTGTGGTCTTCACGAAGCCAAAAATGAA
AATCCAATAGAAGAACTAAAGATTCACTGCCCCTATGGGTGTTGCGGCTTCGATGCCAGTCATAGTTGCACTAGATGTTGTGGTCTTCGCAAGGTTGAAAAAGAAAATCC
AGTAGAAGAACTAAAGATTCATTGCCCCTATGGATGCTGCGGTTTTGATGCCAGTCATAGTTGCACCAGATGCTGTGGTCTTCACGAAGTTGAAAAAGAAACTCCAGTAG
AAAGATTAAAGATTCACTGCCCCTATGGATGTTGTAGCTTTGATGACCATTACAATTGCATCAGATGCTGTGGTCTTTCTGCAGAAGAGCATGCCATAATCCAAAATGGT
TTCAACTTGATCTCTCATCAAAATGAGGCAAATGTGGAAAAAGGGCAACGGGAAAGTGAGTGA
Protein sequenceShow/hide protein sequence
MTSKAVVFSCLLLFVSTVTIASAVSQGTQEQHNTIEVDNENSEEKLRIHCPYGCCGFDGGHSCIRCCGLHEAKNENSIEELKIHCPYGCCGFDASHSCTRCCGLHEAKNE
NPIEELKIHCPYGCCGFDASHSCTRCCGLRKVEKENPVEELKIHCPYGCCGFDASHSCTRCCGLHEVEKETPVERLKIHCPYGCCSFDDHYNCIRCCGLSAEEHAIIQNG
FNLISHQNEANVEKGQRESE