; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024869 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024869
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglucan endo-1,3-beta-glucosidase 1
Genome locationscaffold176:1620253..1620763
RNA-Seq ExpressionMS024869
SyntenyMS024869
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046037.1 glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo var. makuwa]3.6e-4579.66Show/hide
Query:  MAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAI
        M A+LT+TLL LLLLSTI Q  GGEFEQWCVADEQ PDDELQMALDWACG GGANCS IQ NQ CF PNTVKDHASFAFN+YFQ+FKH GGSCFFKGAAI
Subjt:  MAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAI

Query:  ITETDPSKPLLYFLSFLL
        ITE DPSK  L+F  +L+
Subjt:  ITETDPSKPLLYFLSFLL

KAG7026987.1 Glucan endo-1,3-beta-glucosidase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4682.76Show/hide
Query:  MAAVLTRTLLT--LLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGA
        MAA+ T TLLT  LL LSTIQ KAGGEFEQWC+ADEQ+PDDELQMALDWACG GG NCSKIQ NQ CF PNTVKDHASFAFN+YFQNFKH GGSCFFKGA
Subjt:  MAAVLTRTLLT--LLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGA

Query:  AIITETDPSKPLLYFL
        AIITE DPSKP  +FL
Subjt:  AIITETDPSKPLLYFL

XP_022140326.1 glucan endo-1,3-beta-glucosidase 1-like isoform X1 [Momordica charantia]4.8e-5899.12Show/hide
Query:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
        MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQ NQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
Subjt:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC

Query:  FFKGAAIITETDPS
        FFKGAAIITETDPS
Subjt:  FFKGAAIITETDPS

XP_022140327.1 glucan endo-1,3-beta-glucosidase 1-like isoform X2 [Momordica charantia]4.8e-5899.12Show/hide
Query:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
        MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQ NQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
Subjt:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC

Query:  FFKGAAIITETDPS
        FFKGAAIITETDPS
Subjt:  FFKGAAIITETDPS

XP_022140328.1 glucan endo-1,3-beta-glucosidase 1-like isoform X3 [Momordica charantia]4.8e-5899.12Show/hide
Query:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
        MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQ NQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
Subjt:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC

Query:  FFKGAAIITETDPS
        FFKGAAIITETDPS
Subjt:  FFKGAAIITETDPS

TrEMBL top hitse value%identityAlignment
A0A5A7TVX0 Glucan endo-1,3-beta-glucosidase 12 isoform X11.7e-4579.66Show/hide
Query:  MAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAI
        M A+LT+TLL LLLLSTI Q  GGEFEQWCVADEQ PDDELQMALDWACG GGANCS IQ NQ CF PNTVKDHASFAFN+YFQ+FKH GGSCFFKGAAI
Subjt:  MAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAI

Query:  ITETDPSKPLLYFLSFLL
        ITE DPSK  L+F  +L+
Subjt:  ITETDPSKPLLYFLSFLL

A0A6J1CFS1 glucan endo-1,3-beta-glucosidase 1-like isoform X12.3e-5899.12Show/hide
Query:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
        MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQ NQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
Subjt:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC

Query:  FFKGAAIITETDPS
        FFKGAAIITETDPS
Subjt:  FFKGAAIITETDPS

A0A6J1CGI9 glucan endo-1,3-beta-glucosidase 1-like isoform X22.3e-5899.12Show/hide
Query:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
        MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQ NQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
Subjt:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC

Query:  FFKGAAIITETDPS
        FFKGAAIITETDPS
Subjt:  FFKGAAIITETDPS

A0A6J1CHS0 glucan endo-1,3-beta-glucosidase 1-like isoform X32.3e-5899.12Show/hide
Query:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
        MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQ NQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC
Subjt:  MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSC

Query:  FFKGAAIITETDPS
        FFKGAAIITETDPS
Subjt:  FFKGAAIITETDPS

A0A6J1I7Q3 glucan endo-1,3-beta-glucosidase 123.9e-4585.32Show/hide
Query:  MAAVLTRTLLT--LLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGA
        MAA+ T TLLT  LLLLSTIQ KAGGEFEQWC+ADEQ+PDDELQMALDWACG GG NCSKIQ NQ CF PNTVKDHASFAFN+YFQNFKH GGSCFFKGA
Subjt:  MAAVLTRTLLT--LLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGA

Query:  AIITETDPS
        AIITE DPS
Subjt:  AIITETDPS

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 13.2e-2056.79Show/hide
Query:  EQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS
        + +C+A +      LQ ALDWACG G +NCS+IQ  +SC+ PN VK HASFAFNSY+Q      GSC FKG A+IT TDPS
Subjt:  EQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS

Q8VYE5 Glucan endo-1,3-beta-glucosidase 124.6e-1947.25Show/hide
Query:  TIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS
        TI    GG  ++WC+A  Q+   ELQ ALDWACG G  +CS +Q +Q CF P+TV  HAS+AFN+Y+Q        C F GA++  + DPS
Subjt:  TIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS

Q94CD8 Glucan endo-1,3-beta-glucosidase 42.7e-1955.7Show/hide
Query:  WCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS
        +CVA   + DD+L   L+WACG G ANC+ IQ  Q C+ PN VK HASFAFN Y+Q  K  GG+C F G AI T  DPS
Subjt:  WCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS

Q9FJU9 Glucan endo-1,3-beta-glucosidase 135.6e-1744.19Show/hide
Query:  AGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS
        + G    WC+A  ++ + +L+ ALDWACG G  +C+ IQ +Q CF P+T+  HASF FNSYFQ  +    +C F GA +    DPS
Subjt:  AGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS

Q9ZU91 Glucan endo-1,3-beta-glucosidase 33.6e-1643.68Show/hide
Query:  EQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPSKPLLYF
        + +C+A E+     LQ ALDWACG G  +CS +   +SC+ P+ V  H+++AFN+Y+Q      GSC FKG A +T TDPS+    F
Subjt:  EQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPSKPLLYF

Arabidopsis top hitse value%identityAlignment
AT1G11820.2 O-Glycosyl hydrolases family 17 protein2.2e-2156.79Show/hide
Query:  EQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS
        + +C+A +      LQ ALDWACG G +NCS+IQ  +SC+ PN VK HASFAFNSY+Q      GSC FKG A+IT TDPS
Subjt:  EQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPS

AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein2.0e-2256.18Show/hide
Query:  QWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGG-SCFFKGAAIITETDPSKPLLYFLS
        QWC+A   +    LQ+ALD+ACG GGA+C +IQ   +C+ PNT++DHASFAFNSY+Q  KH G  SC F GAA +T TDPSK   +F S
Subjt:  QWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGG-SCFFKGAAIITETDPSKPLLYFLS

AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein7.7e-3064.04Show/hide
Query:  AGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPSKPL
        A  EF QWCVAD Q PD+ +Q A+DWAC  GGA+CS IQ NQ CF PNTVKDHAS  FN+Y+Q +K +GGSC F   A IT+TDPSK L
Subjt:  AGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPSKPL

AT2G04910.2 Carbohydrate-binding X8 domain superfamily protein3.8e-2960.87Show/hide
Query:  AGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPSKPLLYF
        A  EF QWCVAD Q PD+ +Q A+DWAC  GGA+CS IQ NQ CF PNTVKDHAS  FN+Y+Q +K +GGSC F   A IT+TDPS    +F
Subjt:  AGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITETDPSKPLLYF

AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein6.5e-3765.14Show/hide
Query:  MAAVLTRTLLTLLLLS-TIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKI-QANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGA
        M+  L R LL LL+++ T+ +++  E EQWC+ADEQ+PDDELQ ALDWACG GGA+CSK+ Q NQ CF PNT++DHASFAFNSY+Q +K+ GGSC+FKGA
Subjt:  MAAVLTRTLLTLLLLS-TIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKI-QANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGA

Query:  AIITETDPS
        A+ITE DPS
Subjt:  AIITETDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGCTCTCTCTCTGCCATGGCTGCTGTTTTGACAAGAACACTGCTAACTCTGCTATTACTGTCAACAATTCAGCAAAAAGCAGGTGGGGAGTTTGAGCAATGGTG
TGTAGCAGACGAGCAGAGCCCAGATGATGAATTGCAAATGGCTTTGGATTGGGCGTGTGGAGGAGGAGGTGCCAACTGCAGCAAGATCCAAGCAAACCAATCTTGCTTTT
ACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAACTCCTACTTCCAGAACTTCAAGCACCACGGTGGATCCTGCTTCTTCAAAGGAGCTGCCATCATTACTGAG
ACTGATCCTAGTAAGCCACTTCTTTACTTTCTATCATTTTTACTAGATCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGCTCTCTCTCTGCCATGGCTGCTGTTTTGACAAGAACACTGCTAACTCTGCTATTACTGTCAACAATTCAGCAAAAAGCAGGTGGGGAGTTTGAGCAATGGTG
TGTAGCAGACGAGCAGAGCCCAGATGATGAATTGCAAATGGCTTTGGATTGGGCGTGTGGAGGAGGAGGTGCCAACTGCAGCAAGATCCAAGCAAACCAATCTTGCTTTT
ACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAACTCCTACTTCCAGAACTTCAAGCACCACGGTGGATCCTGCTTCTTCAAAGGAGCTGCCATCATTACTGAG
ACTGATCCTAGTAAGCCACTTCTTTACTTTCTATCATTTTTACTAGATCTCTAA
Protein sequenceShow/hide protein sequence
MHRSLSAMAAVLTRTLLTLLLLSTIQQKAGGEFEQWCVADEQSPDDELQMALDWACGGGGANCSKIQANQSCFYPNTVKDHASFAFNSYFQNFKHHGGSCFFKGAAIITE
TDPSKPLLYFLSFLLDL