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MS024874 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024874
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:1942401..1942951
RNA-Seq ExpressionMS024874
SyntenyMS024874
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3500267.1 unnamed protein product [Digitaria exilis]3.4e-0547.95Show/hide
Query:  APQVSHRQFSPHLQKSLPTPATALGHVQGLHPQCSPHGHHRCA--ASPPAVSTFAVAHLQALPPGQGTAQPQL
        APQ +  Q  P  Q +L     A  HVQGLH QCSPH H  C+    PP     A AH Q++PPG GTA P L
Subjt:  APQVSHRQFSPHLQKSLPTPATALGHVQGLHPQCSPHGHHRCA--ASPPAVSTFAVAHLQALPPGQGTAQPQL
KAF8727981.1 hypothetical protein HU200_018553 [Digitaria exilis]1.5e-0546.75Show/hide
Query:  APQVSHRQFSPHLQKSL----PTPATALGHVQGLHPQCSPHGHHRCA--ASPPAVSTFAVAHLQALPPGQGTAQPQL
        APQ +  Q  P  Q +L    P  + A  HVQGLH QCSPH H  C+    PP     A AH Q++PPG GTA P L
Subjt:  APQVSHRQFSPHLQKSL----PTPATALGHVQGLHPQCSPHGHHRCA--ASPPAVSTFAVAHLQALPPGQGTAQPQL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGGTTCCACTTTCATCCCGATCCAGCACCACAAGTTTCACATCGGCAATTTTCGCCGCACTTGCAGAAATCCTTGCCGACTCCGGCCACCGCACTGGGGCACGT
GCAAGGGTTGCATCCGCAGTGCTCCCCGCACGGGCACCACCGGTGCGCCGCCTCCCCGCCTGCCGTCTCCACCTTCGCCGTCGCGCACCTGCAGGCGTTGCCGCCGGGGC
AGGGGACGGCGCAACCACAGCTCTGGTTGCAGGCTCTGATTCCTCCTCCTCCTCCTCTTCTGCCTGCTTCTGCCATTATCTCTTCCTTCACTTCTTCACCGTTCTCGATT
GATCCTCCGCTCCTTCCGATCACTGTTTTCCATTTATATCTTCAAGGCCTTTGTCCCCAAATGACACTCCTTGAACAAGATGAGATCCTCCCTATGTCGGTTTGTCTTGT
CACGTCGAAGACGATACCGTCTTTTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGGTTCCACTTTCATCCCGATCCAGCACCACAAGTTTCACATCGGCAATTTTCGCCGCACTTGCAGAAATCCTTGCCGACTCCGGCCACCGCACTGGGGCACGT
GCAAGGGTTGCATCCGCAGTGCTCCCCGCACGGGCACCACCGGTGCGCCGCCTCCCCGCCTGCCGTCTCCACCTTCGCCGTCGCGCACCTGCAGGCGTTGCCGCCGGGGC
AGGGGACGGCGCAACCACAGCTCTGGTTGCAGGCTCTGATTCCTCCTCCTCCTCCTCTTCTGCCTGCTTCTGCCATTATCTCTTCCTTCACTTCTTCACCGTTCTCGATT
GATCCTCCGCTCCTTCCGATCACTGTTTTCCATTTATATCTTCAAGGCCTTTGTCCCCAAATGACACTCCTTGAACAAGATGAGATCCTCCCTATGTCGGTTTGTCTTGT
CACGTCGAAGACGATACCGTCTTTTGTCTAA
Protein sequenceShow/hide protein sequence
MFRFHFHPDPAPQVSHRQFSPHLQKSLPTPATALGHVQGLHPQCSPHGHHRCAASPPAVSTFAVAHLQALPPGQGTAQPQLWLQALIPPPPPLLPASAIISSFTSSPFSI
DPPLLPITVFHLYLQGLCPQMTLLEQDEILPMSVCLVTSKTIPSFV