; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024897 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024897
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchitotriosidase-1-like
Genome locationscaffold83:12200..13888
RNA-Seq ExpressionMS024897
SyntenyMS024897
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001223 - Glycoside hydrolase family 18, catalytic domain
IPR017853 - Glycoside hydrolase superfamily
IPR029070 - Chitinase insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142964.1 oviduct-specific glycoprotein-like [Momordica charantia]2.3e-4260.81Show/hide
Query:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVG-DSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT
        R+ R       I +WI S  NLP K+IVF IPFHGWAWKLA+  ++DVFSKA GPA G   IS DGQIDYSN++KFIK+N AE  K+D RY I Y Y  +
Subjt:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVG-DSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT

Query:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        TWIAYE+E   P+K+  AKS  VLGYFA NIAAD++VNTLA+AA+ NW
Subjt:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

XP_022143191.1 chitotriosidase-1-like [Momordica charantia]4.2e-5780.74Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I++WI  +PNLPS++IVFGIPFHGWAWKLAD  +HDVFS+A+G A+G  ISSDGQI YSNIKKFI+ N+A+N KNDG+YVIGYTYFDTTWIAYENE T P
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKAN
        EKLRLAKS HVLGYFASNIAADDDVNTLANAAKAN
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKAN

XP_022159350.1 chitinase-3-like protein 2 [Momordica charantia]4.9e-4563.51Show/hide
Query:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDS-ISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT
        R+ R       I +WI S  NLP K+IVFGIPFHGWAWKLA+  +HDVFSKA GPA GD  IS +GQID SN+K+FIK N A+  K+D RY I Y Y  T
Subjt:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDS-ISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT

Query:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        TWIAYE+E T P+K+  AKS  VLGYFA NIAADD+VNTLANAA+ NW
Subjt:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

XP_023521369.1 acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo]2.3e-4261.03Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H +F+KA+G A G+ I   GQI YS+++KFI+DNQA  +  D  Y++ YTYF+TTWI YE++ T  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        +K+ LAK+  VLGYFA NIAADD  NTLANAAK+NW
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

XP_023545402.1 acidic mammalian chitinase-like, partial [Cucurbita pepo subsp. pepo]2.3e-4261.03Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H +F+KA+G A G+ I   GQI YS+++KFI+DNQA  +  D  Y++ YTYF+TTWI YE++ T  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        +K+ LAK+  VLGYFA NIAADD  NTLANAAK+NW
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

TrEMBL top hitse value%identityAlignment
A0A6J1CMZ0 oviduct-specific glycoprotein-like1.1e-4260.81Show/hide
Query:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVG-DSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT
        R+ R       I +WI S  NLP K+IVF IPFHGWAWKLA+  ++DVFSKA GPA G   IS DGQIDYSN++KFIK+N AE  K+D RY I Y Y  +
Subjt:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVG-DSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT

Query:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        TWIAYE+E   P+K+  AKS  VLGYFA NIAAD++VNTLA+AA+ NW
Subjt:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

A0A6J1CPI6 chitotriosidase-1-like2.1e-5780.74Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I++WI  +PNLPS++IVFGIPFHGWAWKLAD  +HDVFS+A+G A+G  ISSDGQI YSNIKKFI+ N+A+N KNDG+YVIGYTYFDTTWIAYENE T P
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKAN
        EKLRLAKS HVLGYFASNIAADDDVNTLANAAKAN
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKAN

A0A6J1DYG4 chitinase-3-like protein 22.4e-4563.51Show/hide
Query:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDS-ISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT
        R+ R       I +WI S  NLP K+IVFGIPFHGWAWKLA+  +HDVFSKA GPA GD  IS +GQID SN+K+FIK N A+  K+D RY I Y Y  T
Subjt:  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDS-ISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDT

Query:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        TWIAYE+E T P+K+  AKS  VLGYFA NIAADD+VNTLANAA+ NW
Subjt:  TWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

A0A6J1G2P4 acidic mammalian chitinase-like4.2e-4260.29Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H +F+KA+G A G+ I   GQI YS+++KFI+DNQA  +  D  Y++ Y Y++TTWI YE+E T  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        +K+ LAK+  VLGYFA NIAADD  NTLANAAK+NW
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

A0A6J1G4H5 chitotriosidase-1-like isoform X12.1e-4160.29Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H  F+KA+G A G+ I   GQI YS+++KFI+DNQA  +  D  Y++ Y Y++TTWI YE+E T  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        +K+ LAK+  VLGYFA NIAADD  NTLANAAK+NW
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

SwissProt top hitse value%identityAlignment
A0A072UR65 Class V chitinase CHIT5b8.4e-0830.09Show/hide
Query:  SWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEK
        SWI+S   +  +K+V G+P +G +WKL D + H +      P+VG     +G + Y  +  F +   A+ + +     + Y+Y  +TWI Y+N  T   K
Subjt:  SWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEK

Query:  LRLAKSHHVLGYF
        +  A++  + GYF
Subjt:  LRLAKSHHVLGYF

A0A072VEP0 Class V chitinase CHIT5a3.3e-1234.33Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        + SWI S   +  +K+V G+  +G AW+L D + + V ++A GPA      +DG ++Y+ I KF K + A N   D   +  Y+Y  TTWI Y++  +  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKA
         K+R AKS  + GYF   +  D D +    A+ A
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKA

A0A1B1J8Z2 Class V chitinase CHIT54.9e-1638.97Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        I SWI S   +P++K+V G+P +G AW+L D + H V +KA GPAV     +DG +DY  I  F KD  A+    D   V  Y+Y  TTWI Y++  +  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
        +K++ A+S  + GYF   I  D D  T++  A   W
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

O81862 Class V chitinase6.7e-2140.44Show/hide
Query:  KSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKP
        +SWI +   LP+KK V G P++G+AW+L +A+ H  ++    P  G +IS DG I Y  I+KFI DN A    N    V+G Y Y  T WI Y++ ++  
Subjt:  KSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
         K+R AK   +LGYF+ ++ ADD+ + L+ AA   W
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

Arabidopsis top hitse value%identityAlignment
AT4G19750.1 Glycosyl hydrolase family protein with chitinase insertion domain2.7e-1739.02Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETK
        +  W+ +   LP+KK V G  + GWAW L DA  +   +  +G A    ISSDG I Y+ I+ +I DN A    +    VIG Y Y  TTWI Y++ ++ 
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETK

Query:  PEKLRLAKSHHVLGYFASNIAAD
          K+R AK   +LGYF+ ++ AD
Subjt:  PEKLRLAKSHHVLGYFASNIAAD

AT4G19770.1 Glycosyl hydrolase family protein with chitinase insertion domain8.1e-2240.65Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        +K WI++   LP++K V G P++GWAW LAD   H  +    GPA+ D    DG+I YS +K +I DN+A    +D   +  Y Y  TTWI Y++EE+  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADD
         K+  AK   +LGYF+  +  DD
Subjt:  EKLRLAKSHHVLGYFASNIAADD

AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain1.1e-1837.1Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        ++ W  +   LP+KK V G P++GWAW LAD   +   +   GPA+ D    DG+I Y  ++ +I DN A  + +D   V  Y Y  TTWI Y++E++  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDD
         K+  AK   +LGYF+ ++  DD+
Subjt:  EKLRLAKSHHVLGYFASNIAADDD

AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain4.7e-2240.44Show/hide
Query:  KSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKP
        +SWI +   LP+KK V G P++G+AW+L +A+ H  ++    P  G +IS DG I Y  I+KFI DN A    N    V+G Y Y  T WI Y++ ++  
Subjt:  KSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW
         K+R AK   +LGYF+ ++ ADD+ + L+ AA   W
Subjt:  EKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

AT4G19820.1 Glycosyl hydrolase family protein with chitinase insertion domain1.5e-2039.52Show/hide
Query:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP
        +++W  +   LP+KK V G P +G+AW L DA  H+ ++ + GPA    IS DG I Y  I++FI DN+A    N    V  Y Y   TWI Y++ ++  
Subjt:  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKP

Query:  EKLRLAKSHHVLGYFASNIAADDD
         K++ AK   +LGYF+ +I ADD+
Subjt:  EKLRLAKSHHVLGYFASNIAADDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTGTGGCGAGTCCTTCTCCTTCAGTTGTGGTGTAATTTTAGTGTGTTTGGCATATTTGTCTTTTAAAGTTCTTAGAGTGCTTAGGGAGGAATATAACTATATAAG
TATCAAGTCATGGATCAACAGTTTTCCTAATTTGCCTTCCAAAAAGATCGTATTTGGAATTCCTTTCCATGGCTGGGCATGGAAACTCGCAGACGCTCACCGACACGACG
TCTTTTCGAAGGCCGAAGGACCAGCCGTAGGAGACAGTATTTCTTCGGACGGCCAAATCGACTACTCCAATATCAAGAAGTTTATAAAAGATAATCAGGCTGAGAATCAA
AAAAATGATGGGAGATATGTAATTGGGTACACATATTTTGATACAACTTGGATTGCCTACGAAAATGAAGAAACCAAACCAGAGAAGCTTAGATTGGCAAAGTCCCACCA
CGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGTTAATACTCTTGCTAACGCAGCTAAAGCCAATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTGTGGCGAGTCCTTCTCCTTCAGTTGTGGTGTAATTTTAGTGTGTTTGGCATATTTGTCTTTTAAAGTTCTTAGAGTGCTTAGGGAGGAATATAACTATATAAG
TATCAAGTCATGGATCAACAGTTTTCCTAATTTGCCTTCCAAAAAGATCGTATTTGGAATTCCTTTCCATGGCTGGGCATGGAAACTCGCAGACGCTCACCGACACGACG
TCTTTTCGAAGGCCGAAGGACCAGCCGTAGGAGACAGTATTTCTTCGGACGGCCAAATCGACTACTCCAATATCAAGAAGTTTATAAAAGATAATCAGGCTGAGAATCAA
AAAAATGATGGGAGATATGTAATTGGGTACACATATTTTGATACAACTTGGATTGCCTACGAAAATGAAGAAACCAAACCAGAGAAGCTTAGATTGGCAAAGTCCCACCA
CGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGTTAATACTCTTGCTAACGCAGCTAAAGCCAATTGGTGA
Protein sequenceShow/hide protein sequence
MYCGESFSFSCGVILVCLAYLSFKVLRVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQ
KNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW