; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024898 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024898
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchitotriosidase-1-like
Genome locationscaffold83:34076..34810
RNA-Seq ExpressionMS024898
SyntenyMS024898
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001223 - Glycoside hydrolase family 18, catalytic domain
IPR017853 - Glycoside hydrolase superfamily
IPR029070 - Chitinase insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030350.1 Chitotriosidase-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3857.78Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        I SW++   NLP ++IVFGIPFHGWAWKL +  QH +F++ADGAA G  I   GQI+YS+++KFIE N+A     D  Y++ Y Y+++TWI YE+E TI 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        +KI LAK+  VLGYFA NIAADD +NTLANAA++N
Subjt:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

XP_022143191.1 chitotriosidase-1-like [Momordica charantia]4.5e-7192.81Show/hide
Query:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET
        S IE+WIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFD+TWIAYENE T
Subjt:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET

Query:  IPEKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNW
        IPEK+RLAKS HVLGYFASNIAADDD NTLANAA+ N+W
Subjt:  IPEKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNW

XP_022159350.1 chitinase-3-like protein 2 [Momordica charantia]2.0e-3962.5Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHD-ISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI
        I++WI+   NLP +QIVFGIPFHGWAWKLA+  +HDVFS+A G A G   IS +GQI  SN+K+FI+ N A+ +K+D +Y I Y Y  +TWIAYE+E TI
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHD-ISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI

Query:  PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        P+KI  AKS  VLGYFA NIAADD+ NTLANAA+TN
Subjt:  PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

XP_023521369.1 acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo]1.0e-3858.52Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        I SW +   NLP ++IVFGIPFHGWAWKL +  QH +F++ADGAA G  I   GQI+YS+++KFIE N+A     D  Y++ YTYF++TWI YE++ TI 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        +KI LAK+  VLGYFA NIAADD +NTLANAA++N
Subjt:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

XP_023545402.1 acidic mammalian chitinase-like, partial [Cucurbita pepo subsp. pepo]1.0e-3858.52Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        I SW +   NLP ++IVFGIPFHGWAWKL +  QH +F++ADGAA G  I   GQI+YS+++KFIE N+A     D  Y++ YTYF++TWI YE++ TI 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        +KI LAK+  VLGYFA NIAADD +NTLANAA++N
Subjt:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

TrEMBL top hitse value%identityAlignment
A0A6J1CMZ0 oviduct-specific glycoprotein-like2.4e-3861.03Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHD-ISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI
        I++WI+   NLP +QIVF IPFHGWAWKLA+  ++DVFS+A G A G+  IS DGQI YSN++KFI+ N A+ +K+D +Y I Y Y  STWIAYE+E  I
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHD-ISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI

Query:  PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        P+KI  AKS  VLGYFA NIAAD++ NTLA+AA+TN
Subjt:  PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

A0A6J1CPI6 chitotriosidase-1-like2.2e-7192.81Show/hide
Query:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET
        S IE+WIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFD+TWIAYENE T
Subjt:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET

Query:  IPEKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNW
        IPEK+RLAKS HVLGYFASNIAADDD NTLANAA+ N+W
Subjt:  IPEKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNW

A0A6J1DYG4 chitinase-3-like protein 29.8e-4062.5Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHD-ISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI
        I++WI+   NLP +QIVFGIPFHGWAWKLA+  +HDVFS+A G A G   IS +GQI  SN+K+FI+ N A+ +K+D +Y I Y Y  +TWIAYE+E TI
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHD-ISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI

Query:  PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        P+KI  AKS  VLGYFA NIAADD+ NTLANAA+TN
Subjt:  PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

A0A6J1G2P4 acidic mammalian chitinase-like1.8e-3857.78Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        I SW +   NLP ++IVFGIPFHGWAWKL +  QH +F++ADGAA G  I   GQI+YS+++KFIE N+A     D  Y++ Y Y+++TWI YE+E TI 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        +KI LAK+  VLGYFA NIAADD +NTLANAA++N
Subjt:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

A0A6J1G4H5 chitotriosidase-1-like isoform X17.0e-3857.78Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        I SW +   NLP ++IVFGIPFHGWAWKL +  QH  F++ADGAA G  I   GQI+YS+++KFIE N+A     D  Y++ Y Y+++TWI YE+E TI 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN
        +KI LAK+  VLGYFA NIAADD +NTLANAA++N
Subjt:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTN

SwissProt top hitse value%identityAlignment
A0A072UR65 Class V chitinase CHIT5b1.5e-0829.66Show/hide
Query:  ISSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEE
        +S + SWI  +  +  +++V G+P +G +WKL D   H + + + G+  G     +G + Y  +  F     AK ++ D      Y+Y  STWI Y+N  
Subjt:  ISSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEE

Query:  TIPEKIRLAKSHHVLGYF
        T+  K+  A++  + GYF
Subjt:  TIPEKIRLAKSHHVLGYF

A0A072VEP0 Class V chitinase CHIT5a4.1e-1132.85Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        + SWIK    +  +++V G+  +G AW+L D   + V +EA G A      +DG + Y+ I KF + + A N+  D   +  Y+Y  +TWI Y++  +I 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNW
         K+R AKS  + GYF   +  D D +    A  +N W
Subjt:  EKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNW

A0A1B1J8Z2 Class V chitinase CHIT52.9e-1234.68Show/hide
Query:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP
        I SWI     +P++++V G+P +G AW+L D   H V ++A G A    + +DG + Y  I  F +   AK +  D   V  Y+Y  +TWI Y++  +I 
Subjt:  IESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETIP

Query:  EKIRLAKSHHVLGYFASNIAADDD
        +K++ A+S  + GYF   I  D D
Subjt:  EKIRLAKSHHVLGYFASNIAADDD

O81862 Class V chitinase2.7e-1838.93Show/hide
Query:  SWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIG-YTYFDSTWIAYENEETIPE
        SWI+    LP+++ V G P++G+AW+L +   H  ++   GAA    IS DG I Y  I+KFI  N A  + N    V+G Y Y  + WI Y++ ++I  
Subjt:  SWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIG-YTYFDSTWIAYENEETIPE

Query:  KIRLAKSHHVLGYFASNIAADDDANTLANAA
        K+R AK   +LGYF+ ++ ADD++  L+ AA
Subjt:  KIRLAKSHHVLGYFASNIAADDDANTLANAA

U5N4E3 Nod factor hydrolase protein 11.6e-0730.51Show/hide
Query:  ISSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEE
        +S + SWI+    +  ++IV G+P +G +WKL D   H + +   G   G     DG + Y  +  F +   AK +  D +    Y+Y  STWI Y++  
Subjt:  ISSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEE

Query:  TIPEKIRLAKSHHVLGYF
        T+  K+  A++  + GYF
Subjt:  TIPEKIRLAKSHHVLGYF

Arabidopsis top hitse value%identityAlignment
AT4G19750.1 Glycosyl hydrolase family protein with chitinase insertion domain1.8e-1737.6Show/hide
Query:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIG-YTYFDSTWIAYENEE
        S +  W++    LP+++ V G  + GWAW L D   +   +  DGAA    ISSDG I Y+ I+ +I  N A    +    VIG Y Y  +TWI Y++ +
Subjt:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIG-YTYFDSTWIAYENEE

Query:  TIPEKIRLAKSHHVLGYFASNIAAD
        +I  K+R AK   +LGYF+ ++ AD
Subjt:  TIPEKIRLAKSHHVLGYFASNIAAD

AT4G19770.1 Glycosyl hydrolase family protein with chitinase insertion domain3.4e-2139.2Show/hide
Query:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET
        S ++ WI     LP+++ V G P++GWAW LAD   H  + +  G A    IS DG+I YS +K +I  NKA  + +D   +  Y Y  +TWI Y++EE+
Subjt:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET

Query:  IPEKIRLAKSHHVLGYFASNIAADD
        I  K+  AK   +LGYF+  +  DD
Subjt:  IPEKIRLAKSHHVLGYFASNIAADD

AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain3.9e-1736.03Show/hide
Query:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET
        S +  W +    LP+++ V G P++GWAW LAD    DV +  D    G  IS DG+I Y  ++ +I  N A  + +D   V  Y Y  +TWI Y++E++
Subjt:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET

Query:  IPEKIRLAKSHHVLGYFASNIAADDDANTLANAART
        I  K+  AK   +LGYF+ ++  DD++  L++A  T
Subjt:  IPEKIRLAKSHHVLGYFASNIAADDDANTLANAART

AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain1.9e-1938.93Show/hide
Query:  SWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIG-YTYFDSTWIAYENEETIPE
        SWI+    LP+++ V G P++G+AW+L +   H  ++   GAA    IS DG I Y  I+KFI  N A  + N    V+G Y Y  + WI Y++ ++I  
Subjt:  SWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIG-YTYFDSTWIAYENEETIPE

Query:  KIRLAKSHHVLGYFASNIAADDDANTLANAA
        K+R AK   +LGYF+ ++ ADD++  L+ AA
Subjt:  KIRLAKSHHVLGYFASNIAADDDANTLANAA

AT4G19820.1 Glycosyl hydrolase family protein with chitinase insertion domain2.5e-1936.22Show/hide
Query:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET
        + + +W +    LP+++ V G P +G+AW L D   H+ ++ + G A    IS DG I Y  I++FI  NKA  + N    V  Y Y   TWI Y++ ++
Subjt:  SSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEET

Query:  IPEKIRLAKSHHVLGYFASNIAADDDA
        I  K++ AK   +LGYF+ +I ADD++
Subjt:  IPEKIRLAKSHHVLGYFASNIAADDDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTTTAGGCTGCAACCAGATAAGTAGTATCGAGTCATGGATCAAATGTTATCCTAATTTGCCTTCCCAACAGATTGTATTTGGAATTCCTTTCCACGGTTGGGC
ATGGAAACTTGCCGATCGTCTCCAGCACGACGTGTTTTCGGAGGCGGATGGAGCAGCAATAGGACACGATATTTCTTCAGATGGCCAAATCTACTACTCCAATATTAAGA
AGTTTATAGAGAGTAATAAGGCTAAGAATCTAAAAAATGACGGCAAATATGTAATTGGGTACACATATTTTGATTCAACTTGGATTGCCTACGAAAATGAAGAAACCATA
CCAGAGAAGATTAGATTGGCAAAGTCCCACCACGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGCTAACACTCTTGCTAACGCAGCTAGAACCAATAA
TTGGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTTTAGGCTGCAACCAGATAAGTAGTATCGAGTCATGGATCAAATGTTATCCTAATTTGCCTTCCCAACAGATTGTATTTGGAATTCCTTTCCACGGTTGGGC
ATGGAAACTTGCCGATCGTCTCCAGCACGACGTGTTTTCGGAGGCGGATGGAGCAGCAATAGGACACGATATTTCTTCAGATGGCCAAATCTACTACTCCAATATTAAGA
AGTTTATAGAGAGTAATAAGGCTAAGAATCTAAAAAATGACGGCAAATATGTAATTGGGTACACATATTTTGATTCAACTTGGATTGCCTACGAAAATGAAGAAACCATA
CCAGAGAAGATTAGATTGGCAAAGTCCCACCACGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGCTAACACTCTTGCTAACGCAGCTAGAACCAATAA
TTGGCCGTGA
Protein sequenceShow/hide protein sequence
MSFLGCNQISSIESWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSNIKKFIESNKAKNLKNDGKYVIGYTYFDSTWIAYENEETI
PEKIRLAKSHHVLGYFASNIAADDDANTLANAARTNNWP