CuGenDBv2

Gene ID	MS024961
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	EF-hand domain-containing protein
Genome location	scaffold254:983533..985907
RNA-Seq Expression	MS024961
Synteny	MS024961
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function) GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

XP_007029833.1 PREDICTED: uncharacterized protein LOC18599700 [Theobroma cacao]

1.5e-54

68.1

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ+LDK  GK+WR  Q+RKISDK+F +IKN S +  L+FEDLYI+ LLVYN+INKRLPGPH DPPSKE+VR +++E D N+D EID+EEF+KFI  LT+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG
        DT I VSQGL++TLVVAPTVA+ TKK+TEGVPGVGK+VQKLP S+YASL+TLA + FQ + +G
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG

XP_012070301.1 uncharacterized protein LOC105632516 [Jatropha curcas]

1.1e-54

68.1

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQILDK  GKQWR  Q+R I+DK+FN++KN + + NLSFEDLYIA LLVYN+INK LPGPH DPPSK++VR+++KE D N+D EID EEF+KFI  +T+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG
        DT I VSQGL++TLVVAPTVA+ TK++TEGVPGVGK+VQKLP S+YASL+TLA + FQ + QG
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG

XP_022146952.1 uncharacterized protein LOC111016024 [Momordica charantia]

3.6e-114

99.08

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Query:  MNLIFFHYKISANDKFRYRCCYGGYPDLPLPGALTVCFARPVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIAT
        MNLIFFHYKI ANDKFRYRCCYGGYPDLPLPGALTVCFA PVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIAT
Subjt:  MNLIFFHYKISANDKFRYRCCYGGYPDLPLPGALTVCFARPVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIAT

Query:  LLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYA
        LLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYA
Subjt:  LLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYA

Query:  SLITLAALSFQNAHQGA
        SLITLAALSFQNAHQGA
Subjt:  SLITLAALSFQNAHQGA

XP_022718678.1 uncharacterized protein LOC111276953 [Durio zibethinus]

5.0e-55

69.75

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ+LDK  GK+WR  Q+RKISDK++ +IKN S    LSFEDLYIA LLVYN+INKRLPGPH DPPSKE+VR +++E D N+D EIDREEF+KFI  LT+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQ
        DT I VSQGL++TLVVAPTVA+ TKK+TEGVPGVGK+VQKLP S+YASL+TLA + FQ + Q
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQ

XP_038876686.1 uncharacterized protein LOC120069050 [Benincasa hispida]

1.5e-56

73.46

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ L + GGK+WRD Q+RKIS+KIF+K KN S +  LSFEDLYIATLLVYN+INK +PGPH DPP+KERV+ELI++SD + D+EIDREEF+ FIL LTS
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQ
        DT ++VSQ L+LTLVVAPTVAVVTKKSTEGVPG+GK VQKLPAS YA L+TLAAL FQN+ Q
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQ

TrEMBL top hits

e value

%identity

Alignment

A0A061EZ21 Calcium-binding EF hand family protein

7.0e-55

68.1

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ+LDK  GK+WR  Q+RKISDK+F +IKN S +  L+FEDLYI+ LLVYN+INKRLPGPH DPPSKE+VR +++E D N+D EID+EEF+KFI  LT+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG
        DT I VSQGL++TLVVAPTVA+ TKK+TEGVPGVGK+VQKLP S+YASL+TLA + FQ + +G
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG

A0A067L670 EF-hand domain-containing protein

5.4e-55

68.1

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQILDK  GKQWR  Q+R I+DK+FN++KN + + NLSFEDLYIA LLVYN+INK LPGPH DPPSK++VR+++KE D N+D EID EEF+KFI  +T+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG
        DT I VSQGL++TLVVAPTVA+ TK++TEGVPGVGK+VQKLP S+YASL+TLA + FQ + QG
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG

A0A6J1A5X4 uncharacterized protein LOC110415261

7.0e-55

68.1

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ+LDK  GK+WR  Q+RKISDK+F +I+N S +  L+FEDLYI+ LLVYN+INKRLPGPH DPPSKE+VR +++E D N+D EIDREEF+KFI  LT+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG
        DT I VSQGL++TLVVAPTVA+ TKK+TEGVPGVGK+VQKLP S+YASL+TLA + FQ + +G
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQG

A0A6J1D109 uncharacterized protein LOC111016024

1.8e-114

99.08

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Query:  MNLIFFHYKISANDKFRYRCCYGGYPDLPLPGALTVCFARPVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIAT
        MNLIFFHYKI ANDKFRYRCCYGGYPDLPLPGALTVCFA PVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIAT
Subjt:  MNLIFFHYKISANDKFRYRCCYGGYPDLPLPGALTVCFARPVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIAT

Query:  LLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYA
        LLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYA
Subjt:  LLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYA

Query:  SLITLAALSFQNAHQGA
        SLITLAALSFQNAHQGA
Subjt:  SLITLAALSFQNAHQGA

A0A6P5WS34 uncharacterized protein LOC111276953

2.4e-55

69.75

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ+LDK  GK+WR  Q+RKISDK++ +IKN S    LSFEDLYIA LLVYN+INKRLPGPH DPPSKE+VR +++E D N+D EIDREEF+KFI  LT+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQ
        DT I VSQGL++TLVVAPTVA+ TKK+TEGVPGVGK+VQKLP S+YASL+TLA + FQ + Q
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64850.1 Calcium-binding EF hand family protein

6.7e-50

59.35

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Query:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS
        MGQ+ +K+ GK+WR  Q++ I D++F++ K  + + NL+FE+LYIA LLVYN+INKRLPGPH DPPSK+ V  ++ + D+N+D E+DREEF+KFI  +T+
Subjt:  MGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTS

Query:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAAL
        +T   VSQGL++ L+VAPTVA+ TKK+TEGVPGVGK+VQKLP S+YASL+TLA +
Subjt:  DTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAAL

AT4G37445.1 BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1)

6.0e-06

25.4

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Query:  KNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTE
        K  + K   +F+D ++A L ++N  N  LPG H D P+ ++++          D+E  ++ F++F  +  S     +    ++T +V+P  A+  K++ E
Subjt:  KNHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTE

Query:  GVPGVGKLVQKLPASVYASLITLAAL
         VP + KL++ +P  ++   +T+ A+
Subjt:  GVPGVGKLVQKLPASVYASLITLAAL

Sequences

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CDS sequence

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ATGAACTTGATCTTTTTCCACTACAAAATCTCTGCAAATGACAAATTTCGTTATCGTTGCTGCTACGGCGGATATCCCGATCTTCCTTTGCCCGGAGCACTTACAGTCTG
CTTTGCGAGGCCTGTGATCTTCAGTTACCGTCGCTCGCTGCCGTCTATCATGGGACAGATCTTGGACAAAATTGGAGGCAAACAATGGAGGGATGCCCAAATGAGGAAGA
TATCAGACAAGATATTTAATAAGATTAAAAATCATTCAGATAAGGTTAACCTGTCATTTGAAGATCTGTATATTGCTACGTTACTTGTGTACAATGAAATTAACAAGCGG
TTGCCTGGCCCGCATCATGATCCGCCCTCGAAGGAACGTGTCAGAGAACTCATAAAGGAAAGCGATCTCAACATGGACCAAGAAATTGACCGCGAAGAATTTATGAAGTT
CATCTTGCTTTTGACATCTGACACCGTCATAACAGTGAGCCAGGGATTAGTCCTCACTTTGGTGGTAGCACCAACAGTCGCTGTGGTCACAAAGAAGAGTACCGAAGGCG
TTCCAGGTGTTGGAAAACTGGTGCAAAAACTACCTGCCTCGGTGTACGCTTCCCTCATCACTCTTGCTGCTCTGTCCTTTCAAAACGCTCACCAGGGGGCTTGA

mRNA sequence

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Protein sequence

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MNLIFFHYKISANDKFRYRCCYGGYPDLPLPGALTVCFARPVIFSYRRSLPSIMGQILDKIGGKQWRDAQMRKISDKIFNKIKNHSDKVNLSFEDLYIATLLVYNEINKR
LPGPHHDPPSKERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKSTEGVPGVGKLVQKLPASVYASLITLAALSFQNAHQGA

MS024961 (gene) of Bitter gourd (TR) v1 genome