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MS024969 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024969
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold254:1401330..1401560
RNA-Seq ExpressionMS024969
SyntenyMS024969
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]7.0e-0440.91Show/hide
Query:  GDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
        G+++ A  R + A  N+ +LE  AI +GLR+ I+ E  RP+H+E+DS+E   LL+ + +D TE  W
Subjt:  GDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]6.7e-2386.57Show/hide
Query:  DGDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
        DGDIVLAGNRFVEACNNVK LEASAIL+GLR+L  L VLRPLHIETDS EVESLLN KREDLT+TGW
Subjt:  DGDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134123.4e-0440.91Show/hide
Query:  GDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
        G+++ A  R + A  N+ +LE  AI +GLR+ I+ E  RP+H+E+DS+E   LL+ + +D TE  W
Subjt:  GDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
A0A6J1DNV9 uncharacterized protein LOC1110224033.2e-2386.57Show/hide
Query:  DGDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
        DGDIVLAGNRFVEACNNVK LEASAIL+GLR+L  L VLRPLHIETDS EVESLLN KREDLT+TGW
Subjt:  DGDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGTTTTGTGACGGGGATATTGTACTTGCGGGCAATCGTTTTGTGGAGGCGTGCAATAACGTCAAATTTCTAGAGGCTTCGGCCATTCTTCAAGGTCTTCGCAG
CTTGATAAAACTTGAAGTTCTTCGCCCTCTTCATATTGAGACAGATTCTGTCGAAGTGGAAAGTTTGCTGAATGGGAAGAGGGAGGACCTTACCGAAACCGGGTGGAAAT
CCTCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGTTTTGTGACGGGGATATTGTACTTGCGGGCAATCGTTTTGTGGAGGCGTGCAATAACGTCAAATTTCTAGAGGCTTCGGCCATTCTTCAAGGTCTTCGCAG
CTTGATAAAACTTGAAGTTCTTCGCCCTCTTCATATTGAGACAGATTCTGTCGAAGTGGAAAGTTTGCTGAATGGGAAGAGGGAGGACCTTACCGAAACCGGGTGGAAAT
CCTCAATTTGA
Protein sequenceShow/hide protein sequence
MEVFCDGDIVLAGNRFVEACNNVKFLEASAILQGLRSLIKLEVLRPLHIETDSVEVESLLNGKREDLTETGWKSSI