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MS024980 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024980
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFLZ-type domain-containing protein
Genome locationscaffold254:2925114..2925598
RNA-Seq ExpressionMS024980
SyntenyMS024980
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain
IPR044533 - FCS-Like Zinc finger 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA20948.1 PREDICTED: senescence-associated (DUF581) [Prunus dulcis]1.0e-0532.77Show/hide
Query:  SSSQGEIALFSNLTRDDPSEIPAG--VGGLAPPRHRVPVFELQPWEPDDASI------------------PARFDGRILESCSYCKNEIGRKENVFMYGC
        SSSQGE  L++++    PS +P G       P R  +   E QP      SI                  P       L+ CS CK ++ +  +V+MYGC
Subjt:  SSSQGEIALFSNLTRDDPSEIPAG--VGGLAPPRHRVPVFELQPWEPDDASI------------------PARFDGRILESCSYCKNEIGRKENVFMYGC

Query:  MQAFCSTLCRAQQILLDGF
        + A+CS  CR  Q+ LDGF
Subjt:  MQAFCSTLCRAQQILLDGF

XP_020423177.1 protein MARD1-like [Prunus persica]3.4e-0639.24Show/hide
Query:  LAPPRHRVPVFELQPWEPDDASIPA---------RFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD
        + PPR+   V    P E DDAS PA            G  L+ C+YC+  +G K+N++MY  ++AFCS  CR +QI++D
Subjt:  LAPPRHRVPVFELQPWEPDDASIPA---------RFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD

XP_020534232.1 FCS-Like Zinc finger 2 [Jatropha curcas]1.3e-0533.06Show/hide
Query:  SSSQGEIALFSNL----------TRDDPSEIPAGVGGLAP-----PRHRVPVFELQPWE--PDDASIPARFD-----GRILESCSYCKNEIGRKENVFMY
        SSSQGEI LF+ L           R +P+ I        P     P HR  +F L   E   ++ ++ A  +     G  L++CS CK ++   ++++MY
Subjt:  SSSQGEIALFSNL----------TRDDPSEIPAGVGGLAP-----PRHRVPVFELQPWE--PDDASIPARFD-----GRILESCSYCKNEIGRKENVFMY

Query:  GCMQAFCSTLCRAQQILLDGF
        G + AFCS  CR  ++ LDGF
Subjt:  GCMQAFCSTLCRAQQILLDGF

XP_021802168.1 protein MARD1-like, partial [Prunus avium]3.4e-0638.75Show/hide
Query:  LAPPRHRVPVFELQPWEPDDASIPA----------RFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD
        + PPR+   V    P E DDAS PA             G  L+ C+YC+  +G K+N++MY  ++AFCS+ CR +QI++D
Subjt:  LAPPRHRVPVFELQPWEPDDASIPA----------RFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD

XP_042516912.1 uncharacterized protein LOC122091140 [Macadamia integrifolia]2.4e-0740.83Show/hide
Query:  AGSSSQGEIALFSNLTRDD-------PSEIPAGVG-------GLAP--PRHRV-----PVFELQPWEPDDASIPARFDGRILESCSYCKNEIGRKENVFM
        A SSSQGEI LFS++   D        +  P  VG        L P  P  R+     PV E +   P+  SI ++  G  LE+C  CK +IG +E VFM
Subjt:  AGSSSQGEIALFSNLTRDD-------PSEIPAGVG-------GLAP--PRHRV-----PVFELQPWEPDDASIPARFDGRILESCSYCKNEIGRKENVFM

Query:  YGCMQAFCSTLCRAQQILLD
        Y  ++AFCS  CR QQI LD
Subjt:  YGCMQAFCSTLCRAQQILLD

TrEMBL top hitse value%identityAlignment
A0A067KZ57 FLZ-type domain-containing protein6.3e-0633.06Show/hide
Query:  SSSQGEIALFSNL----------TRDDPSEIPAGVGGLAP-----PRHRVPVFELQPWE--PDDASIPARFD-----GRILESCSYCKNEIGRKENVFMY
        SSSQGEI LF+ L           R +P+ I        P     P HR  +F L   E   ++ ++ A  +     G  L++CS CK ++   ++++MY
Subjt:  SSSQGEIALFSNL----------TRDDPSEIPAGVGGLAP-----PRHRVPVFELQPWE--PDDASIPARFD-----GRILESCSYCKNEIGRKENVFMY

Query:  GCMQAFCSTLCRAQQILLDGF
        G + AFCS  CR  ++ LDGF
Subjt:  GCMQAFCSTLCRAQQILLDGF

A0A5C7ISB3 FLZ-type domain-containing protein1.8e-0530.37Show/hide
Query:  GAGSSSQGEIALFSNLTRDD----PSEIPAGVGGLAPPRHR---VPVFELQPWEPDDASIPARFDGR--------ILESCSYCKNEIGRKENVFMYGCMQ
        G  SSSQGE+ +F+ L   +      +  A    + PP  +      F +   + +D    ++   +         L++CS CK +  +K+++ MYG +Q
Subjt:  GAGSSSQGEIALFSNLTRDD----PSEIPAGVGGLAPPRHR---VPVFELQPWEPDDASIPARFDGR--------ILESCSYCKNEIGRKENVFMYGCMQ

Query:  AFCSTLCRAQQILLDGFMNLEDLDDSFFEDAQTKK
        AFCST CR  QI LDGF   E ++      A TK+
Subjt:  AFCSTLCRAQQILLDGFMNLEDLDDSFFEDAQTKK

A0A5E4ESQ3 PREDICTED: MARD12.4e-0537.5Show/hide
Query:  LAPPRHRVPVFELQPWEPDDASIPARFD----------GRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD
        + PPR+   V    P E DDAS P  +           G  L+ C+YC+  +G K+N++MY  ++AFCS  CR +QI++D
Subjt:  LAPPRHRVPVFELQPWEPDDASIPARFD----------GRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD

A0A5E4F596 PREDICTED: senescence-associated (DUF581)4.8e-0632.77Show/hide
Query:  SSSQGEIALFSNLTRDDPSEIPAG--VGGLAPPRHRVPVFELQPWEPDDASI------------------PARFDGRILESCSYCKNEIGRKENVFMYGC
        SSSQGE  L++++    PS +P G       P R  +   E QP      SI                  P       L+ CS CK ++ +  +V+MYGC
Subjt:  SSSQGEIALFSNLTRDDPSEIPAG--VGGLAPPRHRVPVFELQPWEPDDASI------------------PARFDGRILESCSYCKNEIGRKENVFMYGC

Query:  MQAFCSTLCRAQQILLDGF
        + A+CS  CR  Q+ LDGF
Subjt:  MQAFCSTLCRAQQILLDGF

A0A6P5RJW1 protein MARD1-like1.7e-0638.75Show/hide
Query:  LAPPRHRVPVFELQPWEPDDASIPA----------RFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD
        + PPR+   V    P E DDAS PA             G  L+ C+YC+  +G K+N++MY  ++AFCS+ CR +QI++D
Subjt:  LAPPRHRVPVFELQPWEPDDASIPA----------RFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD

SwissProt top hitse value%identityAlignment
Q4PSK3 FCS-Like Zinc finger 167.9e-0643.1Show/hide
Query:  PWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGF
        P E D A +        LE C +CK  +   E+VFMYG + AFCS  CRA+Q+  D F
Subjt:  PWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGF

Q9LYE4 FCS-Like Zinc finger 105.7e-0431.46Show/hide
Query:  VFELQPWE---PDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGFMNLEDLDDSF----FEDAQTKKK
        +F + P +   P D   P  F    L  C  C  ++G  E+++MY   +AFCS+ CR+++I LD  M   D +++       D ++KKK
Subjt:  VFELQPWE---PDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGFMNLEDLDDSF----FEDAQTKKK

Arabidopsis top hitse value%identityAlignment
AT3G63210.1 Protein of unknown function (DUF581)9.9e-0438.46Show/hide
Query:  LESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD
        L  C  CK  + +K+++++Y   + FCS+ CR Q++LLD
Subjt:  LESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD

AT3G63230.1 Protein of unknown function (DUF581)5.6e-0743.1Show/hide
Query:  PWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGF
        P E D A +        LE C +CK  +   E+VFMYG + AFCS  CRA+Q+  D F
Subjt:  PWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGF

AT3G63230.2 Protein of unknown function (DUF581)5.6e-0743.1Show/hide
Query:  PWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGF
        P E D A +        LE C +CK  +   E+VFMYG + AFCS  CRA+Q+  D F
Subjt:  PWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGF

AT5G11460.1 Protein of unknown function (DUF581)4.0e-0531.46Show/hide
Query:  VFELQPWE---PDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGFMNLEDLDDSF----FEDAQTKKK
        +F + P +   P D   P  F    L  C  C  ++G  E+++MY   +AFCS+ CR+++I LD  M   D +++       D ++KKK
Subjt:  VFELQPWE---PDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLDGFMNLEDLDDSF----FEDAQTKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCATCGGCAACACATTCCGGCGCCGGCGCCGGTTCCTCAAGCCAAGGCGAAATCGCTCTGTTCTCGAATCTGACTCGCGACGATCCCTCCGAAATCCCCGCCGG
AGTTGGAGGGTTGGCTCCGCCGCGACATCGCGTTCCGGTGTTCGAATTGCAACCTTGGGAGCCGGACGACGCGTCGATCCCGGCGCGTTTCGACGGCCGGATTCTGGAAT
CCTGTTCCTACTGCAAGAACGAAATCGGCCGAAAGGAGAACGTGTTTATGTACGGTTGTATGCAAGCCTTCTGCTCTACACTGTGCCGAGCCCAACAGATTCTGCTCGAC
GGTTTCATGAATTTGGAGGATTTGGATGATTCGTTTTTCGAGGATGCTCAGACCAAGAAAAAAGGACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCATCGGCAACACATTCCGGCGCCGGCGCCGGTTCCTCAAGCCAAGGCGAAATCGCTCTGTTCTCGAATCTGACTCGCGACGATCCCTCCGAAATCCCCGCCGG
AGTTGGAGGGTTGGCTCCGCCGCGACATCGCGTTCCGGTGTTCGAATTGCAACCTTGGGAGCCGGACGACGCGTCGATCCCGGCGCGTTTCGACGGCCGGATTCTGGAAT
CCTGTTCCTACTGCAAGAACGAAATCGGCCGAAAGGAGAACGTGTTTATGTACGGTTGTATGCAAGCCTTCTGCTCTACACTGTGCCGAGCCCAACAGATTCTGCTCGAC
GGTTTCATGAATTTGGAGGATTTGGATGATTCGTTTTTCGAGGATGCTCAGACCAAGAAAAAAGGACCTTGA
Protein sequenceShow/hide protein sequence
MSSSATHSGAGAGSSSQGEIALFSNLTRDDPSEIPAGVGGLAPPRHRVPVFELQPWEPDDASIPARFDGRILESCSYCKNEIGRKENVFMYGCMQAFCSTLCRAQQILLD
GFMNLEDLDDSFFEDAQTKKKGP