; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS024985 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS024985
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationscaffold254:2960686..2961204
RNA-Seq ExpressionMS024985
SyntenyMS024985
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438658.1 PREDICTED: uncharacterized protein LOC103483701 [Cucumis melo]4.5e-5187.12Show/hide
Query:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS
        ME+ELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G++EEAV AHMSFCRKFKSNPA+RVADGMRLMLRRRSSD+SSSS 
Subjt:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS

Query:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        S    S+SSAKKY RSASSSQVGF+ SS+SLY
Subjt:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

XP_022138128.1 uncharacterized protein LOC111009375 [Momordica charantia]6.5e-82100Show/hide
Query:  MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE
        MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE
Subjt:  MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE

Query:  EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQ
        EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQ
Subjt:  EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQ

XP_022974390.1 uncharacterized protein LOC111473071 [Cucurbita maxima]2.8e-5377.99Show/hide
Query:  PHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFK
        P   +PI  LG  L IQL  K    S+ME+E+VVTC+CCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G +EEAV AHMSFCRKFK
Subjt:  PHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFK

Query:  SNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        +NPAIRVADG+RLMLRRRSSD+S+SSSSS S +NSSA KYGRS SSSQVGF+ SS+SLY
Subjt:  SNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

XP_023540731.1 uncharacterized protein LOC111801010 [Cucurbita pepo subsp. pepo]2.8e-5377.99Show/hide
Query:  PHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFK
        P   +PI  LG  L IQL  K    S+ME+E+VVTC+CCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G +EEAV AHMSFCRKFK
Subjt:  PHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFK

Query:  SNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        +NPAIRVADG+RLMLRRRSSD+S+SSSSS S +NSSA KYGRS SSSQVGF+ SS+SLY
Subjt:  SNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

XP_038904398.1 uncharacterized protein LOC120090761 [Benincasa hispida]1.0e-5573.99Show/hide
Query:  MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE
        MP  K   +K +  P H   IQ LG L  +Q   K      ME+ELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G++E
Subjt:  MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE

Query:  EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        EAV AHMSFCRKFKSNPA+RVADGMRLMLRRRSSD+S+SSSS  S+ +SS KKYGRSASSSQVGF+ SS+SLY
Subjt:  EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

TrEMBL top hitse value%identityAlignment
A0A0A0L4S3 Uncharacterized protein6.4e-5186.36Show/hide
Query:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS
        ME+ELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G++EEAV AHMSFCRKFKSNPA+RVADGMRLMLRRRSSD+SSSS 
Subjt:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS

Query:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        S    S+SS KKY RSASSSQVGF+ SS+SLY
Subjt:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

A0A1S3AWX5 uncharacterized protein LOC1034837012.2e-5187.12Show/hide
Query:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS
        ME+ELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G++EEAV AHMSFCRKFKSNPA+RVADGMRLMLRRRSSD+SSSS 
Subjt:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS

Query:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        S    S+SSAKKY RSASSSQVGF+ SS+SLY
Subjt:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

A0A5A7U0I4 Uncharacterized protein2.2e-5187.12Show/hide
Query:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS
        ME+ELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G++EEAV AHMSFCRKFKSNPA+RVADGMRLMLRRRSSD+SSSS 
Subjt:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS

Query:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        S    S+SSAKKY RSASSSQVGF+ SS+SLY
Subjt:  SSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

A0A6J1CC69 uncharacterized protein LOC1110093753.1e-82100Show/hide
Query:  MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE
        MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE
Subjt:  MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVE

Query:  EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQ
        EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQ
Subjt:  EAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQ

A0A6J1IDB2 uncharacterized protein LOC1114730711.4e-5377.99Show/hide
Query:  PHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFK
        P   +PI  LG  L IQL  K    S+ME+E+VVTC+CCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPL G +EEAV AHMSFCRKFK
Subjt:  PHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFK

Query:  SNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY
        +NPAIRVADG+RLMLRRRSSD+S+SSSSS S +NSSA KYGRS SSSQVGF+ SS+SLY
Subjt:  SNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFE-SSMSLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)7.0e-1847.62Show/hide
Query:  VTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKS-----NPAIRVADGMRLMLRRRSSDMSSSSSS
        VTCDCCGL E+CTQ YI  V+ ++ GKW+CGLCSEAV+ E  R+K+ L  + EEA+  HM+ C KFKS     NP   +   MR +LR+         S 
Subjt:  VTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKS-----NPAIRVADGMRLMLRRRSSDMSSSSSS

Query:  SNSNS
         NS S
Subjt:  SNSNS

AT1G72510.2 Protein of unknown function (DUF1677)7.0e-1847.62Show/hide
Query:  VTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKS-----NPAIRVADGMRLMLRRRSSDMSSSSSS
        VTCDCCGL E+CTQ YI  V+ ++ GKW+CGLCSEAV+ E  R+K+ L  + EEA+  HM+ C KFKS     NP   +   MR +LR+         S 
Subjt:  VTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKS-----NPAIRVADGMRLMLRRRSSDMSSSSSS

Query:  SNSNS
         NS S
Subjt:  SNSNS

AT1G79770.1 Protein of unknown function (DUF1677)1.3e-1640Show/hide
Query:  QLGKKSLELSAMEMEL-----------------VVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKF
        ++GKKSL  S  ++ L                    C+CCG++E+CT  YI  V+ KF GKW+CGLCSEAV++E  R K+  EG +E A+K HMS C +F
Subjt:  QLGKKSLELSAMEMEL-----------------VVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKF

Query:  ----KSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNS
            +  PA+  AD MR MLRR +   S     + S ++S
Subjt:  ----KSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNS

AT3G22540.1 Protein of unknown function (DUF1677)1.8e-2961.4Show/hide
Query:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKF-KSNPAIRVADGMRLMLRRRSSDMSSSS
        ME+E  V C+CCGL EDCTQ YISEVK+ F+ KWLCGLCSEAVRDE  R K     +V+EAVKAH+SFC KF K NPA+ VADGMR MLRRRS ++++SS
Subjt:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKF-KSNPAIRVADGMRLMLRRRSSDMSSSS

Query:  SSSNSNSNSSAKKY
        +S     +++ K Y
Subjt:  SSSNSNSNSSAKKY

AT4G14819.1 Protein of unknown function (DUF1677)1.4e-2965.14Show/hide
Query:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS
        ME+E  VTC+CCGL EDCTQ YIS+VKA F GKWLCGLCSEAV DE  RS K    +VEEAV AHMSFC KF +NPA  VADGMR MLRRRS ++S   S
Subjt:  MEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFCRKFKSNPAIRVADGMRLMLRRRSSDMSSSSS

Query:  SSNSNSNSS
             SN++
Subjt:  SSNSNSNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACTGAGAAAACCTTCAAAACCAAACCCCACTTTTACCCACATCACAATTATCCAATCCAGCATCTGGGTCGTCTTCTCTCCATCCAATTGGGCAAAAAGAGTTT
GGAGCTTTCGGCTATGGAGATGGAGCTGGTTGTCACGTGCGATTGCTGTGGGCTGAAAGAGGATTGCACCCAATTCTACATCAGCGAAGTGAAGGCCAAATTCGAAGGGA
AATGGCTGTGTGGGCTGTGTTCTGAGGCTGTAAGAGACGAAGCCAAGAGGAGCAAGAAGCCATTGGAGGGATCGGTGGAGGAAGCTGTGAAGGCCCACATGTCGTTTTGC
CGCAAGTTCAAATCCAACCCTGCCATTCGTGTGGCCGATGGAATGAGGCTCATGCTCAGGAGGAGGTCCAGCGACATGTCGTCTTCCTCTTCTTCTTCTAATTCTAATTC
TAATTCTTCTGCTAAGAAATATGGGAGATCGGCCAGCTCCTCGCAGGTGGGCTTTGAATCGTCTATGTCTTTGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACTGAGAAAACCTTCAAAACCAAACCCCACTTTTACCCACATCACAATTATCCAATCCAGCATCTGGGTCGTCTTCTCTCCATCCAATTGGGCAAAAAGAGTTT
GGAGCTTTCGGCTATGGAGATGGAGCTGGTTGTCACGTGCGATTGCTGTGGGCTGAAAGAGGATTGCACCCAATTCTACATCAGCGAAGTGAAGGCCAAATTCGAAGGGA
AATGGCTGTGTGGGCTGTGTTCTGAGGCTGTAAGAGACGAAGCCAAGAGGAGCAAGAAGCCATTGGAGGGATCGGTGGAGGAAGCTGTGAAGGCCCACATGTCGTTTTGC
CGCAAGTTCAAATCCAACCCTGCCATTCGTGTGGCCGATGGAATGAGGCTCATGCTCAGGAGGAGGTCCAGCGACATGTCGTCTTCCTCTTCTTCTTCTAATTCTAATTC
TAATTCTTCTGCTAAGAAATATGGGAGATCGGCCAGCTCCTCGCAGGTGGGCTTTGAATCGTCTATGTCTTTGTACTGA
Protein sequenceShow/hide protein sequence
MPTEKTFKTKPHFYPHHNYPIQHLGRLLSIQLGKKSLELSAMEMELVVTCDCCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLEGSVEEAVKAHMSFC
RKFKSNPAIRVADGMRLMLRRRSSDMSSSSSSSNSNSNSSAKKYGRSASSSQVGFESSMSLY