CuGenDBv2

Gene ID	MS024988
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold254:2969399..2973526
RNA-Seq Expression	MS024988
Synteny	MS024988
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582303.1 hypothetical protein SDJN03_22305, partial [Cucurbita argyrosperma subsp. sororia]

4.4e-74

76.81

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Query:  DRSPAMGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSR
        DRS  MGEALFELEQVL     SLTIEEA +LQTCKSKAVRDFTFG L GGGVTWA               GA  LFGL RFSRSL+SCVDHILALDGSR
Subjt:  DRSPAMGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSR

Query:  MQKELANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNA
        MQKELANIVVTKYHNDPRTMQ ISKHF+YE+VFDDSTLDRP+IRWRYRNFFSDDVAH QRTH ND K+NLHGN HH SSN DSN NQ  SY +PDDKGNA
Subjt:  MQKELANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNA

Query:  LEFKPVL
         EF PVL
Subjt:  LEFKPVL

XP_022138115.1 uncharacterized protein LOC111009363 isoform X1 [Momordica charantia]

6.1e-92

90.1

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA               GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

XP_022138116.1 uncharacterized protein LOC111009363 isoform X2 [Momordica charantia]

6.1e-92

90.1

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA               GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

XP_022956077.1 uncharacterized protein LOC111457878 [Cucurbita moschata]

2.6e-74

78.22

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEA +LQTCKSKAVRDFTFG L GGGVTWA               GA ALFGL RFSRSL+SCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHF+YE+VFDDSTLDRP+IRWRYRNFFSDDVAH QRTH ND K+NLHGN HH SSN DSN NQ+ SY +PDDKGNA EF P
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

XP_023527180.1 uncharacterized protein LOC111790494 isoform X1 [Cucurbita pepo subsp. pepo]

2.6e-74

78.22

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEA +LQTCKSKAVRDFTFG L GGGVTWA               GA ALFGL RFSRSL+SCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHF+YE+VFDDSTLDRP+IRWRYRNFFSDDVAH QRTH ND K+NLHGN HH SSN DSN NQ+ SY +PDDKGNA EF P
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T1 Uncharacterized protein

8.9e-65

68.1

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Query:  VLRDRSPAMGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALD
        V  D+S  MGE L ELE VL      LTIEEA LLQTC+SKAVRDFTFG + GGG+TWA               GAA+L G WRFSRSLNSCVD+ILALD
Subjt:  VLRDRSPAMGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALD

Query:  GSRMQKELANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDK
        GSRMQKELANIVVT+YHNDP  MQ+ISKHFYYE+VFDDST DRP+IRWRYRNFFSDDVAH QRTH ND  NN+H NSH      DS++ Q  SY +PDD 
Subjt:  GSRMQKELANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDK

Query:  GNALEFKPVL
        GNA EFKPVL
Subjt:  GNALEFKPVL

A0A6J1C8I6 uncharacterized protein LOC111009363 isoform X1

2.9e-92

90.1

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA               GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

A0A6J1C8T0 uncharacterized protein LOC111009363 isoform X2

2.9e-92

90.1

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA               GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

A0A6J1GVC2 uncharacterized protein LOC111457878

1.2e-74

78.22

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEA +LQTCKSKAVRDFTFG L GGGVTWA               GA ALFGL RFSRSL+SCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANIVVTKYHNDPRTMQHISKHF+YE+VFDDSTLDRP+IRWRYRNFFSDDVAH QRTH ND K+NLHGN HH SSN DSN NQ+ SY +PDDKGNA EF P
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

A0A6J1IXZ4 uncharacterized protein LOC111479542

5.2e-73

77.23

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Query:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL
        MGEALFELEQVL     SLTIEEA +LQTCKSKAVRDFTFG L GGGVTWA               GA ALFGL RFSRSL+SCVDHILALDGSRMQKEL
Subjt:  MGEALFELEQVL-----SLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWA---------------GAAALFGLWRFSRSLNSCVDHILALDGSRMQKEL

Query:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP
        ANI+VTK HNDPRTMQHISKHF+YE+VFDDSTLDRP+IRWRYRNFFSDDVAH QR H ND K+NLHGN HH SSN DSN NQ+ SY EPDDKGNA EF P
Subjt:  ANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKP

Query:  VL
        VL
Subjt:  VL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05430.1 unknown protein

8.7e-12

32.05

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Query:  LTIEEATLLQTCKSKAVRDFTFGALAGGGVTW------------------AGAAA----LFGLWRFSRSLNSCVDHILALDGSRMQKELANIVVTKYHND
        +T EE+  + +C  KA+    F +  GGG+TW                  AG AA    +   W  S+   S +DHIL+ D +RMQKEL N++V     +
Subjt:  LTIEEATLLQTCKSKAVRDFTFGALAGGGVTW------------------AGAAA----LFGLWRFSRSLNSCVDHILALDGSRMQKELANIVVTKYHND

Query:  PRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHG
            Q +SKHFY E V+ D   D+P++RWR R  F++  +     +   ++ N +G
Subjt:  PRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHG

Sequences

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CDS sequence

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ATGATCTTTCCCGCAGAGCTCACGGGAAGGTTTGGCTGTTGGACGTGGGCTCTTTGGCCCATAAGTCTTTACTGTTCCAAGGCCCAAGCCGTCGTGCTTCGTGATCGGAG
CCCCGCCATGGGTGAAGCTTTATTCGAACTCGAACAAGTTCTCAGCTTGACGATCGAGGAAGCAACTTTGCTTCAAACATGTAAATCTAAGGCCGTTCGAGATTTTACAT
TTGGAGCTCTAGCTGGAGGTGGTGTGACATGGGCAGGAGCTGCTGCGCTATTTGGATTATGGAGATTTAGCAGGTCCCTGAATTCGTGCGTCGATCATATTCTTGCACTG
GATGGAAGTAGAATGCAGAAGGAGTTGGCAAATATTGTAGTGACGAAATATCACAATGATCCTCGTACGATGCAGCACATATCCAAGCATTTTTATTATGAGAAAGTTTT
TGATGATTCAACCTTGGACCGTCCAAGAATAAGGTGGCGTTATCGAAATTTCTTTAGTGATGATGTTGCTCATGGTCAGAGGACACATGACAATGACACTAAGAACAACT
TGCATGGAAATTCGCACCATTACTCATCCAACCATGATTCCAATTCCAACCAGAATTACTCCTACGATGAGCCTGATGACAAAGGAAATGCACTTGAGTTCAAGCCAGTC
CTTAGATGCAAGAAAGTCCTTCCAGGTTCTCAACAAGTTGCCTTGCATCAAAAGAAATTGAATATAGTGGATTCGAAAGGGGATGATTCACTGGGAAGTCTGGGATACAG
ACTAAGCCGGGTACTGACGCTACGGCAGACCCGCTGGATTGTCTTTTTGGTCCACTGGCAAAAGGAGAAGAAATTCAACATTCGAATTCCTCCACCACGACATTCAAATC
TCACTCTCGTAGTAGAAGATACCATCGTCGGCATCGAAGACATAATCAAACGGTACCAACAAGCTTCGAACATGTGTAATTTCAGGATATACAGAGAAGCCATAGCCATC
CATAGTGCAGGATCCACGGAGCAGTGA

mRNA sequence

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Protein sequence

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MIFPAELTGRFGCWTWALWPISLYCSKAQAVVLRDRSPAMGEALFELEQVLSLTIEEATLLQTCKSKAVRDFTFGALAGGGVTWAGAAALFGLWRFSRSLNSCVDHILAL
DGSRMQKELANIVVTKYHNDPRTMQHISKHFYYEKVFDDSTLDRPRIRWRYRNFFSDDVAHGQRTHDNDTKNNLHGNSHHYSSNHDSNSNQNYSYDEPDDKGNALEFKPV
LRCKKVLPGSQQVALHQKKLNIVDSKGDDSLGSLGYRLSRVLTLRQTRWIVFLVHWQKEKKFNIRIPPPRHSNLTLVVEDTIVGIEDIIKRYQQASNMCNFRIYREAIAI
HSAGSTEQ

MS024988 (gene) of Bitter gourd (TR) v1 genome