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MS025012 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025012
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold96:835615..836010
RNA-Seq ExpressionMS025012
SyntenyMS025012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFP55593.1 hypothetical protein [Rosa rugosa]1.3e-1044.66Show/hide
Query:  VVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWN--------VLAPVPLVEMKVEIEMQVVVLVAA
        ++N  + G EL+  A D D +VVVE + LLG LQQL+EERVV +NHR+H+PLLL  LAH + H P W+        V   + LV + V + + +V   A 
Subjt:  VVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWN--------VLAPVPLVEMKVEIEMQVVVLVAA

Query:  EPH
        EPH
Subjt:  EPH

BAT78892.1 hypothetical protein VIGAN_02164700 [Vigna angularis var. angularis]7.8e-1138.21Show/hide
Query:  VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWNVLAPVPL-----------VEMKVEIEMQVVV--
        V++ ++G E++  A DGDG+ ++EP+F+ G LQQLHE+ VVH++ RD++PLLL  L +++   P WNVL  + L           V++K  + M VVV  
Subjt:  VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWNVLAPVPL-----------VEMKVEIEMQVVV--

Query:  -----LVAAEPHRELESPKRKRE
             ++A  PH E E  + KR+
Subjt:  -----LVAAEPHRELESPKRKRE

XP_022922251.1 uncharacterized protein LOC111430288 [Cucurbita moschata]4.6e-1145.13Show/hide
Query:  MKTVVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNV-LAPVPLV------EMKVEIEMQVVVL
        M  V+ V+N  +E  E+V RA DGD S +VE + + GLLQ+  E+R+V+IN R+HEPLLLLA EN   PL ++ L P+ +V       M++EI+MQ V++
Subjt:  MKTVVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNV-LAPVPLV------EMKVEIEMQVVVL

Query:  V------AAEPHR
        +      AA+PHR
Subjt:  V------AAEPHR

XP_028806629.1 uncharacterized protein LOC114761440 [Prosopis alba]1.6e-0835.71Show/hide
Query:  VVGV--VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLA--HENGHEPLWNVLAPVPL--------------VEMKVE
        VVGV  V++ ++GAEL+  AG+ DG+++++ +F L LLQ+LHEERVV ++HR+HEPLL L+  H+N      N+L  V L              + MK+ 
Subjt:  VVGV--VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLA--HENGHEPLWNVLAPVPL--------------VEMKVE

Query:  IEMQVVVLV---------------AAEPHRELESPKRKRE
          M ++ L+               ++EPH E  +P++K E
Subjt:  IEMQVVVLV---------------AAEPHRELESPKRKRE

XP_038875258.1 uncharacterized protein LOC120067761 [Benincasa hispida]5.7e-1445Show/hide
Query:  VVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNVLAPVPLV----EMKVEIEMQ--------VV
        VV +VNN ++GA++V RA +GDGS +++ + +LGLLQ+L ++R+V IN+R+HEPLLLLA++NG   L + L  VP+V    EM VE+E+Q        V 
Subjt:  VVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNVLAPVPLV----EMKVEIEMQ--------VV

Query:  VLVAAEPHRELESPKRKREEKGVLLVRWKMAKGRKRRWRG
           AAEPHR+    K   +E        K AKG  RR RG
Subjt:  VLVAAEPHRELESPKRKREEKGVLLVRWKMAKGRKRRWRG

TrEMBL top hitse value%identityAlignment
A0A0N7KMQ6 Os06g0714366 protein1.5e-0750Show/hide
Query:  VVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL-----LAHENG-HEP
        V+ VV++ ++ AE+V  AGDGDG++++EP  LLGLL++ HE+RV+ I HR HEPL L      AH  G H P
Subjt:  VVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL-----LAHENG-HEP

A0A0S3REA9 Uncharacterized protein3.8e-1138.21Show/hide
Query:  VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWNVLAPVPL-----------VEMKVEIEMQVVV--
        V++ ++G E++  A DGDG+ ++EP+F+ G LQQLHE+ VVH++ RD++PLLL  L +++   P WNVL  + L           V++K  + M VVV  
Subjt:  VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWNVLAPVPL-----------VEMKVEIEMQVVV--

Query:  -----LVAAEPHRELESPKRKRE
             ++A  PH E E  + KR+
Subjt:  -----LVAAEPHRELESPKRKRE

A0A445K946 Uncharacterized protein6.6e-0834.19Show/hide
Query:  VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLA--HENGHEPLWNVL-------------APVPLVEMKVEIEMQVVV
        +N  ++GA+++  A +G G+ ++E + L    +QLHE+ VVH++HRDH+PLLLL+  +++   P WNVL               V  V+MK  + M VVV
Subjt:  VNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLA--HENGHEPLWNVL-------------APVPLVEMKVEIEMQVVV

Query:  ----------LVAAEPH
                  ++A +PH
Subjt:  ----------LVAAEPH

A0A6J1E3M1 uncharacterized protein LOC1114302882.2e-1145.13Show/hide
Query:  MKTVVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNV-LAPVPLV------EMKVEIEMQVVVL
        M  V+ V+N  +E  E+V RA DGD S +VE + + GLLQ+  E+R+V+IN R+HEPLLLLA EN   PL ++ L P+ +V       M++EI+MQ V++
Subjt:  MKTVVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNV-LAPVPLV------EMKVEIEMQVVVL

Query:  V------AAEPHR
        +      AA+PHR
Subjt:  V------AAEPHR

J7FWT1 Uncharacterized protein6.4e-1144.66Show/hide
Query:  VVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWN--------VLAPVPLVEMKVEIEMQVVVLVAA
        ++N  + G EL+  A D D +VVVE + LLG LQQL+EERVV +NHR+H+PLLL  LAH + H P W+        V   + LV + V + + +V   A 
Subjt:  VVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLL--LAHENGHEPLWN--------VLAPVPLVEMKVEIEMQVVVLVAA

Query:  EPH
        EPH
Subjt:  EPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGGTGGTGGGAGTGGTGAATAATGGCGTGGAGGGTGCGGAATTGGTCGGGAGGGCAGGGGATGGAGATGGGTCCGTGGTGGTGGAACCCATGTTCCTGCTCGG
CCTCCTTCAGCAGCTCCACGAAGAGAGGGTGGTTCACATCAACCACAGGGATCACGAACCTCTGTTGCTCCTGGCCCACGAGAATGGCCACGAACCCCTTTGGAATGTCC
TTGCTCCGGTGCCGCTGGTGGAGATGAAAGTGGAAATTGAGATGCAGGTGGTGGTGCTTGTCGCCGCCGAGCCCCATCGAGAATTGGAGAGCCCAAAAAGAAAGAGAGAA
GAGAAGGGGGTTTTGTTGGTCAGATGGAAAATGGCCAAGGGTCGGAAGAGGAGATGGAGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACGGTGGTGGGAGTGGTGAATAATGGCGTGGAGGGTGCGGAATTGGTCGGGAGGGCAGGGGATGGAGATGGGTCCGTGGTGGTGGAACCCATGTTCCTGCTCGG
CCTCCTTCAGCAGCTCCACGAAGAGAGGGTGGTTCACATCAACCACAGGGATCACGAACCTCTGTTGCTCCTGGCCCACGAGAATGGCCACGAACCCCTTTGGAATGTCC
TTGCTCCGGTGCCGCTGGTGGAGATGAAAGTGGAAATTGAGATGCAGGTGGTGGTGCTTGTCGCCGCCGAGCCCCATCGAGAATTGGAGAGCCCAAAAAGAAAGAGAGAA
GAGAAGGGGGTTTTGTTGGTCAGATGGAAAATGGCCAAGGGTCGGAAGAGGAGATGGAGAGGGTGA
Protein sequenceShow/hide protein sequence
MKTVVGVVNNGVEGAELVGRAGDGDGSVVVEPMFLLGLLQQLHEERVVHINHRDHEPLLLLAHENGHEPLWNVLAPVPLVEMKVEIEMQVVVLVAAEPHRELESPKRKRE
EKGVLLVRWKMAKGRKRRWRG