; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025025 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025025
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionADP-ribosylation factor GTPase-activating protein like
Genome locationscaffold96:1775163..1775666
RNA-Seq ExpressionMS025025
SyntenyMS025025
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8055425.1 hypothetical protein FH972_012265 [Carpinus fangiana]5.2e-2845.18Show/hide
Query:  TLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAV
        ++I+ L+ IN++QE++I NLETKAIQL NLYFVFQGVILS++ S AS ++C  WWIPF LSL+AA LNL +   T+  +L+C+E LDQN ED    S   
Subjt:  TLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAV

Query:  RVLDSPTIR-----------------RTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC
        R+LD+                        KPD  ++ +RRV     + + +GFS I+L+GC+ LLC
Subjt:  RVLDSPTIR-----------------RTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC

KAF5460600.1 hypothetical protein F2P56_020459, partial [Juglans regia]5.2e-2846.2Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL------ASA
        I+ L+ IN++QE+RIHN+E KA+QL NLYFVFQGVILS++ S A+  +C  W IPF LSLLAA LNL A   TV  +LR +E LDQN EDL         
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL------ASA

Query:  SAAVRVLD--------------SPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS
         A +  +D               P  R+  KPD ++  +R+VF+  G+  F+GFS ++L+GCR LLC  +S
Subjt:  SAAVRVLD--------------SPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS

KAG2680998.1 hypothetical protein I3760_11G124300 [Carya illinoinensis]6.2e-2950.34Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRV
        I  LD IN++QE+RIH LE KA+QL NLYFVFQGVILS++ S    + C  W++PF LSL+AA LN+ +   T+  YLR  E LDQN ED+         
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRV

Query:  LDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC
        +    I   TKPD +++ +RRVF+  GV +FVGFSG++L+GC  LLC
Subjt:  LDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC

KAG6633990.1 hypothetical protein CIPAW_12G087500 [Carya illinoinensis]8.9e-2845.88Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL------ASA
        I+NL+ IN++QE+RIHN+E KA+QL NLYFVFQGVILS++ S AS  +C  W IPF LSL+AA LNL A   TV  +LR +E LDQN EDL         
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL------ASA

Query:  SAAVRVLD-------------SPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS
         A +  +D              P  R+   PD +++  RRV++  G+  F+GFS ++L+GCR LLC + +
Subjt:  SAAVRVLD-------------SPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS

PON47942.1 hypothetical protein TorRG33x02_321770 [Trema orientale]1.2e-2750Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL-----ASAS
        ++ L EIN +QE RIHNLETKA+QL NLYFVFQGVILS +     SL C + WIPF LSLLAA LN  A   T+L +++C+E LDQN+EDL        +
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL-----ASAS

Query:  AAVRVLDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC
         A      P +R+  +PD   +  RR F++  +A+FVGFS ++LFGC  +LC
Subjt:  AAVRVLDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC

TrEMBL top hitse value%identityAlignment
A0A2P5BGM9 Uncharacterized protein5.6e-2850Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL-----ASAS
        ++ L EIN +QE RIHNLETKA+QL NLYFVFQGVILS +     SL C + WIPF LSLLAA LN  A   T+L +++C+E LDQN+EDL        +
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL-----ASAS

Query:  AAVRVLDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC
         A      P +R+  +PD   +  RR F++  +A+FVGFS ++LFGC  +LC
Subjt:  AAVRVLDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC

A0A5N6R5M6 Uncharacterized protein2.5e-2845.18Show/hide
Query:  TLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAV
        ++I+ L+ IN++QE++I NLETKAIQL NLYFVFQGVILS++ S AS ++C  WWIPF LSL+AA LNL +   T+  +L+C+E LDQN ED    S   
Subjt:  TLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAV

Query:  RVLDSPTIR-----------------RTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC
        R+LD+                        KPD  ++ +RRV     + + +GFS I+L+GC+ LLC
Subjt:  RVLDSPTIR-----------------RTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC

A0A5N6R6D7 Uncharacterized protein9.6e-2845.09Show/hide
Query:  NSENSIEATLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMED
        +S NS   T I+ L +IN++QE++I +LETK I L NLYFVFQGVILS++ S AS ++CR+ WIPF LSL+AA LNL +   T+  +LRC+E LDQN ED
Subjt:  NSENSIEATLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMED

Query:  L----------ASASAAVRVLDSPTIRRTTKP--DRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS
        +          A  +A      S      T+P  D F + +R++F    + + +GFSGI+L+GCR LLC +++
Subjt:  L----------ASASAAVRVLDSPTIRRTTKP--DRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS

A0A7J0FRI3 Uncharacterized protein3.1e-2646.43Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLA--------
        I+ L++ N++QE R+ NLETK++Q+ NLYFVFQGVIL++V S +SSLRC  WWIPFSLSLLAA LNL+A    V   L+  E +DQ   DL         
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLA--------

Query:  ----SASAAVRVLDSPTIRRTT-----KPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS
            S       L+ P     T     KPD  RR RRR  A L + + +GFSG V++GC ++LC SS+
Subjt:  ----SASAAVRVLDSPTIRRTT-----KPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS

A0A7N2KVA0 Uncharacterized protein1.1e-2648.39Show/hide
Query:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRV
        I+ L +IN +QE RI  LE KA+QL NLYFVFQGVILS   S A S++C  WWIPF LSLLAA LNLFAF  TV   L C E  DQN   L    A    
Subjt:  IQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRV

Query:  LDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSSGDRN
               R   PD  ++  RRV A   + + +GFSG+VL+GC  +LC   S + +
Subjt:  LDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSSGDRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCAGAAAACAGCATAGAAGCAACGCTAATCCAAAATCTTGATGAAATCAACCGGAGGCAAGAGGACCGAATCCACAACCTGGAAACCAAAGCCATTCAGCTCGC
AAATCTATATTTCGTGTTCCAAGGCGTGATCCTCTCCGCCGTGTTCTCGCCGGCGTCGTCTCTCCGATGCCGACAATGGTGGATCCCGTTCTCGCTCTCTCTCCTCGCCG
CCGCCCTCAACCTCTTCGCCTTCGCCGCCACCGTCCTCGCCTACCTCCGCTGCGCCGAAGCCCTCGACCAGAACATGGAGGATTTGGCCTCTGCGTCGGCCGCCGTCCGA
GTCCTGGATTCTCCAACGATTAGACGGACCACGAAGCCGGACCGGTTCCGAAGGGCTCGGCGGAGGGTGTTTGCCGTTTTGGGGGTCGCAATTTTTGTTGGGTTCAGTGG
GATTGTGCTCTTCGGTTGCCGTGTCCTTCTCTGTCCCTCCAGCTCCGGCGATCGGAATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCAGAAAACAGCATAGAAGCAACGCTAATCCAAAATCTTGATGAAATCAACCGGAGGCAAGAGGACCGAATCCACAACCTGGAAACCAAAGCCATTCAGCTCGC
AAATCTATATTTCGTGTTCCAAGGCGTGATCCTCTCCGCCGTGTTCTCGCCGGCGTCGTCTCTCCGATGCCGACAATGGTGGATCCCGTTCTCGCTCTCTCTCCTCGCCG
CCGCCCTCAACCTCTTCGCCTTCGCCGCCACCGTCCTCGCCTACCTCCGCTGCGCCGAAGCCCTCGACCAGAACATGGAGGATTTGGCCTCTGCGTCGGCCGCCGTCCGA
GTCCTGGATTCTCCAACGATTAGACGGACCACGAAGCCGGACCGGTTCCGAAGGGCTCGGCGGAGGGTGTTTGCCGTTTTGGGGGTCGCAATTTTTGTTGGGTTCAGTGG
GATTGTGCTCTTCGGTTGCCGTGTCCTTCTCTGTCCCTCCAGCTCCGGCGATCGGAATTTGTAG
Protein sequenceShow/hide protein sequence
MNSENSIEATLIQNLDEINRRQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVR
VLDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSSGDRNL